Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02615 and BL02323
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:18
# Commandline: needle
# -asequence dna-align/BSNT_02615___rpsP.1.5803.seq
# -bsequence dna-align/BL02323___rpsP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02615___rpsP-BL02323___rpsP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02615___rpsP-BL02323___rpsP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02615___rpsP
# 2: BL02323___rpsP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity: 252/273 (92.3%)
# Similarity: 252/273 (92.3%)
# Gaps: 0/273 ( 0.0%)
# Score: 1176.0
#
#
#=======================================
BSNT_02615___ 1 ATGGCAGTAAAAATTCGTTTAAAACGTATGGGAGCAAAAAAATCTCCTTT 50
|||||||||||||||||||||||||||||||||||.||||||||||||||
BL02323___rps 1 ATGGCAGTAAAAATTCGTTTAAAACGTATGGGAGCTAAAAAATCTCCTTT 50
BSNT_02615___ 51 CTATCGTATTGTTGTAGCAGATTCTCGTTCACCACGTGACGGCCGTTTCA 100
|||||||||||||||||||||||||||||||||.|||||||||||.||||
BL02323___rps 51 CTATCGTATTGTTGTAGCAGATTCTCGTTCACCGCGTGACGGCCGCTTCA 100
BSNT_02615___ 101 TCGAAACAGTCGGAACTTACAACCCGGTTGCAAAACCAGCGGAAGTAAAA 150
||||||||||||||||||||||||||.|||||||||||||||||||.|||
BL02323___rps 101 TCGAAACAGTCGGAACTTACAACCCGCTTGCAAAACCAGCGGAAGTCAAA 150
BSNT_02615___ 151 ATTGACGAAGAGCTTGCTCTTAAATGGCTTCAAACTGGAGCGAAACCATC 200
||.||||||||||||||.|||||||||||||||||.|||||.|||||.||
BL02323___rps 151 ATCGACGAAGAGCTTGCGCTTAAATGGCTTCAAACAGGAGCTAAACCGTC 200
BSNT_02615___ 201 TGATACAGTTCGCAACTTGTTCTCTAGCCAAGGAATCATGGAAAAATTCC 250
|||.||.|||||||||.|||||||.|...||||.||.|||||||||||||
BL02323___rps 201 TGACACGGTTCGCAACCTGTTCTCAAAAGAAGGCATTATGGAAAAATTCC 250
BSNT_02615___ 251 ACAACGCTAAACAAGGCAAGTAA 273
||||||||||||||.||||.|||
BL02323___rps 251 ACAACGCTAAACAAAGCAAATAA 273
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