Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02608 and BL02317
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:17
# Commandline: needle
# -asequence dna-align/BSNT_02608___rnc.1.5803.seq
# -bsequence dna-align/BL02317___rnc.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02608___rnc-BL02317___rnc.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02608___rnc-BL02317___rnc.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02608___rnc
# 2: BL02317___rnc
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 754
# Identity: 621/754 (82.4%)
# Similarity: 621/754 (82.4%)
# Gaps: 8/754 ( 1.1%)
# Score: 2544.0
#
#
#=======================================
BSNT_02608___ 1 ATGTCAAAACACTCACATTATAAAGATAAAAAAAAGTTCTATAAAAAAGT 50
|||||||||||.|||||||..|.|||.|||||||.|||..|.|||||||.
BL02317___rnc 1 ATGTCAAAACATTCACATTTCAGAGACAAAAAAATGTTTCAAAAAAAAGC 50
BSNT_02608___ 51 AGAACAATTTAAAGAGTTTCAAGAACGGATTTCGGTTCACTTTCAAAATG 100
.||.||.||||||.|||||||.|||||||||||||||||.||||||||.|
BL02317___rnc 51 GGAGCAGTTTAAAAAGTTTCAGGAACGGATTTCGGTTCAATTTCAAAACG 100
BSNT_02608___ 101 AAAAGCTTTTGTATCAAGCATTTACACATTCATCTTATGTGAATGAGCAT 150
|.||||||||.||||||||.||||||||||||||||||||||||||||||
BL02317___rnc 101 AGAAGCTTTTATATCAAGCGTTTACACATTCATCTTATGTGAATGAGCAT 150
BSNT_02608___ 151 CGGAAAAAGCCGTATGAAGATAATGAAAGGCTTGAATTTTTAGGTGACGC 200
||.||.|||||.||||||||||||||.|||||||||||||||||.|||||
BL02317___rnc 151 CGAAAGAAGCCATATGAAGATAATGAGAGGCTTGAATTTTTAGGAGACGC 200
BSNT_02608___ 201 TGTTTTGGAACTGACGATCTC-CAGATTCTTATTTGCCAAATACCCGGCT 249
.|||||||||||||||||.|| || |||.||||..||||||||||||||.
BL02317___rnc 201 CGTTTTGGAACTGACGATTTCTCA-ATTTTTATACGCCAAATACCCGGCG 249
BSNT_02608___ 250 ATGAGTGAAGGAGATTTGACGAAATTGAGAGCCGCAATTGTTTGCGAACC 299
|||||.||.||.||||||||||||||||||||.||.||.||.|||||.||
BL02317___rnc 250 ATGAGCGAGGGTGATTTGACGAAATTGAGAGCGGCGATCGTATGCGAGCC 299
BSNT_02608___ 300 GTCTCTCGTTTCATTGGCTCACGAGCTGTCATTCGGCGATCTTGTCCTGT 349
.|||.|.|||||..||||.||.|||||.||.|||||.||.|||||.||.|
BL02317___rnc 300 TTCTTTGGTTTCCCTGGCCCATGAGCTTTCTTTCGGAGAGCTTGTTCTAT 349
BSNT_02608___ 350 TGGGTAAAGGCGAGGAAATGACAGGCGGAAGAAAGCGTCCTGCTCTATTG 399
||||.|||||.|||||||||||.||.||||||||||||||.||.||.||.
BL02317___rnc 350 TGGGAAAAGGAGAGGAAATGACTGGAGGAAGAAAGCGTCCGGCGCTTTTA 399
BSNT_02608___ 400 GCGGATGTTTTTGAGGCATTTATCGGAGCCTTGTACCTTGACCAAGGATT 449
||.|||||.|||||.||.||||||||.||..|.||.||.||.||.||..|
BL02317___rnc 400 GCCGATGTGTTTGAAGCTTTTATCGGTGCGCTCTATCTGGATCAGGGGCT 449
BSNT_02608___ 450 AG-AGCCGGTCGAAAGTTTCTTAAAAGTTTATGTGTTCCCTAAAATTAAC 498
.| |||| ||||..|.|||..|.||||..||.||.|||||||||||..||
BL02317___rnc 450 CGAAGCC-GTCGTGACTTTTCTGAAAGCGTACGTTTTCCCTAAAATCGAC 498
BSNT_02608___ 499 GATGGTGCTTTTTCTCATGTGATGGATTTCAAAAGCCAGCTGCAGGAATA 548
|||||||||||||||||||||||||||||.|||||||||||||||||||.
BL02317___rnc 499 GATGGTGCTTTTTCTCATGTGATGGATTTTAAAAGCCAGCTGCAGGAATT 548
BSNT_02608___ 549 CGTGCAGCGGGACGGCAAAGGCTCTCTGGAGTATAAAATC--TCCAACGA 596
.||.|||||.|||||...||||...||||||||||||||| || |.||
BL02317___rnc 549 TGTACAGCGCGACGGGCGAGGCATACTGGAGTATAAAATCCTTC--AGGA 596
BSNT_02608___ 597 AAAAGGACCTGCGCACAACCGTGAATTTGAAGCCATCGTATCTCTAAAAG 646
|||||||||.|||||||||||.|||||||||||.|..|||||.|||||||
BL02317___rnc 597 AAAAGGACCGGCGCACAACCGCGAATTTGAAGCAAATGTATCGCTAAAAG 646
BSNT_02608___ 647 GTGAACCACTCGGAGTCGGAAACGGCCGTTCAAAGAAAGAAGCCGAACAG 696
|.|||..|||.||.||.||||.|||||||||.||.||||||||.||||||
BL02317___rnc 647 GAGAAGTACTTGGGGTGGGAAGCGGCCGTTCCAAAAAAGAAGCTGAACAG 696
BSNT_02608___ 697 CACGCTGCTCAGGAAGCTTTAGCTAAATTGCAAAAACACCATACGAAACA 746
||.||.|||||.|||||..|.||.||..|||||||||||||||.||||||
BL02317___rnc 697 CATGCCGCTCAAGAAGCGCTCGCGAAGCTGCAAAAACACCATATGAAACA 746
BSNT_02608___ 747 ATAA 750
||||
BL02317___rnc 747 ATAA 750
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