Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02605 and BL02314
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:17
# Commandline: needle
# -asequence dna-align/BSNT_02605___fabD.1.5803.seq
# -bsequence dna-align/BL02314___fabD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02605___fabD-BL02314___fabD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02605___fabD-BL02314___fabD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02605___fabD
# 2: BL02314___fabD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 977
# Identity: 720/977 (73.7%)
# Similarity: 720/977 (73.7%)
# Gaps: 40/977 ( 4.1%)
# Score: 2588.5
#
#
#=======================================
BSNT_02605___ 1 ATGAGTAAGATTGCATTTTTATTCCCGGGTCAGGGATCACAATTTATCGG 50
|||.|.||||||||.|||.||||||||||.||.||.||.||...||||||
BL02314___fab 1 ATGGGCAAGATTGCTTTTCTATTCCCGGGCCAAGGTTCGCAGCATATCGG 50
BSNT_02605___ 51 CATGGGAAAAGAGCTTTATGAGCAGGTGCCTGCTGCAAAGCGTCTGTTTG 100
|||||||.|.||..|.|||||..|.|..||...|||.|||....|.||||
BL02314___fab 51 CATGGGACACGAATTGTATGAAAAAGAACCGAATGCGAAGAAGATTTTTG 100
BSNT_02605___ 101 ATGAAGCCGATGAAACGTTAGAAACAAAGCTCAGCTCGCTTATTTTTGAG 150
|.|||||.|||.|||||.|.||||||||.||.|||.|.||.||.|||||.
BL02314___fab 101 AAGAAGCGGATCAAACGCTTGAAACAAAACTGAGCACCCTCATGTTTGAA 150
BSNT_02605___ 151 GGGGCTGCTGAAGAATTAACACTTACATACAATGCGCAGCC--TGCTTTG 198
||||.|||..|.|||.|.||.|||||||||||.|||||||| ..||||
BL02314___fab 151 GGGGATGCAAAGGAACTGACGCTTACATACAACGCGCAGCCAAGCCTTT- 199
BSNT_02605___ 199 CTTACGACAAGCATCGCTGTTCTTGAGAAATTTAAAGAATCTGGCATTAC 248
|.|||.|.||||||||.|..|||||.|||.|.||.||||..|||||||.
BL02314___fab 200 -TAACGGCGAGCATCGCAGCGCTTGAAAAACTGAAGGAATACGGCATTAA 248
BSNT_02605___ 249 ACCTGATTTCACAGCAGGACACAGCCTTGGTGAATATTCTGCACTGGTTG 298
|.|.||.|...|.|||||.||||||||.||.|||||....|||.||||.|
BL02314___fab 249 AGCCGACTATGCGGCAGGTCACAGCCTCGGCGAATACAGCGCATTGGTCG 298
BSNT_02605___ 299 CGGCTGGCGCTCTGTCTTTCAAAGATGCTGTTTATACCGTCAGAAAACGC 348
|.||.|||||..||||.||.||||||||.||||||.||||||||||.|||
BL02314___fab 299 CTGCCGGCGCCTTGTCGTTTAAAGATGCGGTTTATGCCGTCAGAAAGCGC 348
BSNT_02605___ 349 GGAGAGTTTATGAATGAAGCGGTACCGGCTGGCGAAGGAGCAATGGCTGC 398
||.||.||.|||||||||||.||.|||||.||.|||||.||.|||||.||
BL02314___fab 349 GGCGAATTCATGAATGAAGCCGTGCCGGCGGGAGAAGGCGCGATGGCGGC 398
BSNT_02605___ 399 GATTCTCGGCATGGA--------TGCTGAAGCATTAAAGCAAGTAACCGA 440
.|||||||||||||| .|||| |||| ||||.||.||
BL02314___fab 399 CATTCTCGGCATGGACAGCCAGGCGCTG-------AAAG-AAGTGACGGA 440
BSNT_02605___ 441 TAAAGTCACAGAGGAAGGCAACCTTGTACAGCTTGCGAATCTCAACTGTC 490
.|||.|..|.||.|||||.||||||||.|||||.||.|||.|.|||||.|
BL02314___fab 441 CAAAATTTCCGAAGAAGGAAACCTTGTTCAGCTCGCCAATTTGAACTGCC 490
BSNT_02605___ 491 CTGGCCAAATCGTCATTTCCGGAACAGCTAAAGGGGTTGAGCTTGCATCT 540
||||.|||||||||||.||.||||||||||||||.||.|||||.||.||.
BL02314___fab 491 CTGGGCAAATCGTCATCTCGGGAACAGCTAAAGGCGTGGAGCTCGCTTCA 540
BSNT_02605___ 541 GAACTGGCAAAAGAGAACGGCGCAAAACGCGCAATTCCGCTTGAAGTAAG 590
||.||.||.|||||.||.||||||||||||||.|||||.||.|||||.||
BL02314___fab 541 GAGCTTGCGAAAGAAAAGGGCGCAAAACGCGCGATTCCTCTCGAAGTCAG 590
BSNT_02605___ 591 CGGTCCGTTCCATTCTGAACTGATGAAACCGGCTGCTGAAAAGC----TG 636
|||.||||||||||||||.||||||||.|||||.|||||.|||| ||
BL02314___fab 591 CGGGCCGTTCCATTCTGAGCTGATGAAGCCGGCAGCTGATAAGCTTCGTG 640
BSNT_02605___ 637 AAAGAGGTATTGGACGCCTGTG-AC-ATAAAAGACGCTGACATTCCGGTC 684
|| ||..|.||.|| ||| || ||.||.|||||.|.||||||||||
BL02314___fab 641 AA----GTTCTTGATGC--GTGCACGATCAACGACGCAGCCATTCCGGTC 684
BSNT_02605___ 685 ATCTCAAATGTTTCTGCTGACGTGATGACTGAAAAAGCAGATATCAAAGA 734
.||||.||.||..|.||.|||.|..|.||.||.||||..||.|| .||||
BL02314___fab 685 GTCTCCAACGTAACGGCCGACTTTGTAACGGATAAAGACGACAT-TAAGA 733
BSNT_02605___ 735 A-AAACTTATTGAGCAGCTTTACTCTCCGGTTCGTTTTGAGGAAAGCATT 783
| |||||.|||||.|||||.||.||.||.||.||.|||||.||||..||.
BL02314___fab 734 ATAAACTGATTGAACAGCTGTATTCCCCTGTACGCTTTGAAGAAACAATC 783
BSNT_02605___ 784 AACAAGCTGATCGCAGAGGGTGTTACGACTTTTATTGAAATCGGTCCCGG 833
|.|...|||||.|..||.||.||.|||||.||.|||||||||||||||||
BL02314___fab 784 AGCCGCCTGATTGACGAAGGCGTCACGACCTTCATTGAAATCGGTCCCGG 833
BSNT_02605___ 834 AAAAGTGCTTTCAGGCCTTGTGAAAAAAGTAAATAGACGGTTAAAAACAA 883
|||.||..|.|||||.||||||||.|||||.||..|..|..|.|||||.|
BL02314___fab 834 AAAGGTTTTGTCAGGGCTTGTGAAGAAAGTGAACCGCAGAGTCAAAACGA 883
BSNT_02605___ 884 TTGCTGTATCAGATCCGGAAACGATCGAGCTGGCAATTCAAACGCTTAAG 933
|||||||||||||.|||.|.||.||.||.||.||..||||||||.|.|||
BL02314___fab 884 TTGCTGTATCAGACCCGAACACAATTGAACTTGCCGTTCAAACGTTGAAG 933
BSNT_02605___ 934 GAGGAGAATGATAATGCT------TAA 954
|||||.||.||.|||||| |||
BL02314___fab 934 GAGGAAAACGAAAATGCTGGAAAATAA 960
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