Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02602 and BL02311
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_02602___recG.1.5803.seq
# -bsequence dna-align/BL02311___recG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02602___recG-BL02311___recG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02602___recG-BL02311___recG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02602___recG
# 2: BL02311___recG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2103
# Identity: 1528/2103 (72.7%)
# Similarity: 1528/2103 (72.7%)
# Gaps: 108/2103 ( 5.1%)
# Score: 5395.0
#
#
#=======================================
BSNT_02602___ 1 GTGAAACAACATCAGCAAACTAGTATAGCTAACATTAAGGGTATTGGGCC 50
|||.||||..|||.||||..|||||||.||...||.||.||..|.|||.|
BL02311___rec 1 GTGGAACACAATCTGCAACTTAGTATATCTGTTATAAAAGGCGTCGGGAC 50
BSNT_02602___ 51 GGAAACAGAAAAAACATTACACGAACTCGGTATTTATGACATTTCT-GAT 99
||||||.||||||||.||..||||.|||||.||.||| ||..|||| |||
BL02311___rec 51 GGAAACGGAAAAAACGTTGAACGAGCTCGGAATCTAT-ACGGTTCTCGAT 99
BSNT_02602___ 100 CTTCTGAATTATTTCCCTTATCGCTATGATGACTACGAGCTGAGGGATTT 149
|||.|.||.||.|||||.||.||.|||||.||.||.||..||.|.|||||
BL02311___rec 100 CTTTTAAACTACTTCCCGTACCGATATGACGATTATGAATTGCGCGATTT 149
BSNT_02602___ 150 AGAAGAAGTAAAGCATGATGAAAGAGTCACAGTTGAAGGGAAGGTTCATT 199
.|||||.||....||.||||||.||||.||.||.||||||||||||||
BL02311___rec 150 GGAAGATGTGGCACACGATGAACGAGTGACGGTGGAAGGGAAGGTTCA-- 197
BSNT_02602___ 200 CA--GAGCCTTCTCTTACCTATTACGGAAAAAAACGAAACAGGCTGACAT 247
|| ||||||||||||.||||||||||.|||||.||.|.|.|.||.||.|
BL02311___rec 198 CAGCGAGCCTTCTCTTGCCTATTACGGGAAAAAGCGGAGCCGTCTCACGT 247
BSNT_02602___ 248 TCAGGCTTCTGGTCGGCCACTATTTAATTACAGCCGTATGTTTTAACCGG 297
||.|||||.|||||||..|||||||.||.|||||.||.||.||||||.||
BL02311___rec 248 TCCGGCTTTTGGTCGGGAACTATTTGATCACAGCGGTTTGCTTTAACAGG 297
BSNT_02602___ 298 CCTTATTTGAAGAAGCAGCTTTCGCTCGGCTCTGTGGTGACGGTTTCAGG 347
|||||||||||.||..|||||.||.|||||||..|.||.||.||..|.||
BL02311___rec 298 CCTTATTTGAAAAAAAAGCTTGCGATCGGCTCGATTGTTACCGTAACCGG 347
BSNT_02602___ 348 TAAATGGGACAAGCACCGCCAAACCATCTCTGTTCAGGAGTTGAAAAACG 397
.|||||||||||||||.|.|||.||.|....||.||.|||.|||||||||
BL02311___rec 348 AAAATGGGACAAGCACAGACAATCCGTGATGGTGCAAGAGCTGAAAAACG 397
BSNT_02602___ 398 GGCCGCATCAAGAAGA-CAAAAGCATTGAACCAGTGTATTCTGTGAAAGA 446
|||||||.||.|..|| ||...| ||||||||.||.||.||.||.|||||
BL02311___rec 398 GGCCGCACCAGGGTGATCAGTCG-ATTGAACCCGTATACTCCGTCAAAGA 446
BSNT_02602___ 447 AAATGTTACCGTCAAAATGATGAGGCGGTTTATTCAGCAGGCGCTGACC- 495
|||..|.|||||.||.|.|||||||...||.|||||| |..||||.||
BL02311___rec 447 AAACATCACCGTAAAGACGATGAGGAAATTGATTCAG--GAAGCTGTCCG 494
BSNT_02602___ 496 ---CAATATGCAGACTCACTT--CC--TGATCCTCTTCCGGAAAAGCTAA 538
|.||.|||.| || || .||||||||||||||||||||..
BL02311___rec 495 CAGCCATTTGCCG------TTTGCCGAAGATCCTCTTCCGGAAAAGCTTC 538
BSNT_02602___ 539 GAAAAAGCTATAAACTGCCTGACTATTATC---AAGCGTTAAAAGCAATG 585
|.|....|||.||||| .||| |.|||.| |.|||.||||.||.|||
BL02311___rec 539 GGACCGCCTACAAACT-TCTG--TCTTACCAGGAGGCGGTAAAGGCGATG 585
BSNT_02602___ 586 CACCAGCCTGAAACAAGGGAAGCATTAAAGCTTGCCAGACGGCGGTTTGT 635
|||.||||.||..|.||||||||.|||||||.|||..|.||.||.|||||
BL02311___rec 586 CACAAGCCCGAGTCGAGGGAAGCTTTAAAGCATGCGCGGCGCCGTTTTGT 635
BSNT_02602___ 636 TTATGAAGAATTTTTGTTGTTTCAGTTGAAAATGCAGGCGTTCCGAAAG- 684
.|||||.|||||||||.||||||||.|||||||||||||.||.||||||
BL02311___rec 636 ATATGAGGAATTTTTGCTGTTTCAGCTGAAAATGCAGGCTTTGCGAAAGT 685
BSNT_02602___ 685 ----GCGGAAAGAG---------AGCAGACACAAGGGATACGGCAGCGTT 721
||||.|||.| |.|||.|||| |.||
BL02311___rec 686 TCGAGCGGGAAGCGTCCGACGGAATCAGCCACA-------------CCTT 722
BSNT_02602___ 722 T----TTCAAACGAAGAACTCATGAGA----TTTATCAAAAGCCTCCCGT 763
| | ||||||..||| | |||.||||||||||.||||
BL02311___rec 723 TCGGCT-----CGAAGACGTCA----ATTCGTTTGTCAAAAGCCTTCCGT 763
BSNT_02602___ 764 TTCCCCTCACAAACGCCCAGTC--ACGCGTTCTTCG-CGAAATAACAGCA 810
||||..|.||||||||.|||.| |.||| .||| |||.|||..|...
BL02311___rec 764 TTCCTTTGACAAACGCGCAGGCGAAAGCG---CTCGACGACATATTAAGG 810
BSNT_02602___ 811 GACATGTCTTCTCCATACAGAATGAACCGTCTTCTTCAAGGGGACGTTGG 860
||||||.||||....||.|.||||||.||.|||.|.|||||.|||||.||
BL02311___rec 811 GACATGGCTTCAGGGTATAAAATGAATCGGCTTTTGCAAGGAGACGTCGG 860
BSNT_02602___ 861 ATCAGGAAAAACGGCAGTCGCCGCCATTGCACTGTATGCCGCGATCCTAT 910
.|||||.|||||.||.||||||||.|||||.||.||.|||.||.|.||.|
BL02311___rec 861 TTCAGGCAAAACAGCCGTCGCCGCGATTGCGCTATACGCCTCGCTGCTTT 910
BSNT_02602___ 911 CCGGATACCAAGGAGCGCTCATGGTGCCGACAGAAATTCTGGCCGAGCAG 960
||||||.|||.||.|||.|.|||||||||||.|||||.|||||.||.|||
BL02311___rec 911 CCGGATTCCAGGGGGCGATGATGGTGCCGACCGAAATACTGGCGGAACAG 960
BSNT_02602___ 961 CATGCTGATTCGCTCGTTTCGCTATTTGAAAAATGGGACGTCAGCGTTGC 1010
||.||.||||||||.||.||.||.|||||..|....|||||||..||.||
BL02311___rec 961 CACGCCGATTCGCTTGTATCCCTCTTTGAGCAGCACGACGTCAATGTGGC 1010
BSNT_02602___ 1011 TCTTTTGACAAGCTCTGTTAAAGGGAAGCGGCGAAAAGAACTGCTTGAGC 1060
.|||||.|||||||||||.||||||||..||.|||.|||.||..|.||..
BL02311___rec 1011 GCTTTTAACAAGCTCTGTGAAAGGGAAAAGGAGAAGAGAGCTTTTAGAAA 1060
BSNT_02602___ 1061 GTCTTGCGGCGGGTGAGATTGATATTCTTGTAGGAACCCACGCTTTAATC 1110
|..|....|..||.||.|||||||||.|.||.||.||.|||||..|.||.
BL02311___rec 1061 GATTAAAAGAAGGAGAAATTGATATTTTGGTGGGGACGCACGCCCTTATT 1110
BSNT_02602___ 1111 CAAGACGAGGTGGAGTTTAAGGCGCTGAGTCTCGTTATTACTGATGAACA 1160
||.|||||.||..|.|||||...|||..|.|||||.||.||.||||||||
BL02311___rec 1111 CAGGACGATGTCCACTTTAAACAGCTCGGGCTCGTGATCACCGATGAACA 1160
BSNT_02602___ 1161 GCACAGATTTGGAGTTGAGCAGCGCAAAAAGCTTCGGAACAAAGGGCAGG 1210
||||.|.||.||.||.|||||..|.|||||.||..|.|.|||||||.|.|
BL02311___rec 1161 GCACCGCTTCGGCGTCGAGCAAAGAAAAAAACTGAGAAGCAAAGGGAAAG 1210
BSNT_02602___ 1211 ATCCCGATGTTCTCTTTATGACAGCCACTCCAATCCCAAGAACGTTAGCG 1260
||||||||||..|.||||||||.||.||.||.||.||.|||||..|.|||
BL02311___rec 1211 ATCCCGATGTCTTGTTTATGACGGCGACGCCGATTCCGAGAACACTGGCG 1260
BSNT_02602___ 1261 ATCACAGTGTTCGGTGAAATGGATGTATCTGTCATCGATGAGATGCCGGC 1310
|||||.||.|||||.|||||||||||.||.|||||||||||.||||||||
BL02311___rec 1261 ATCACGGTTTTCGGGGAAATGGATGTGTCCGTCATCGATGAAATGCCGGC 1310
BSNT_02602___ 1311 TGGACGAAAGAGAATCGAAACCTATTGGGTAAAACATGACATGCTGGATC 1360
|||.||||||.|.|||||.||.|||||||||||.||.||||||||.||.|
BL02311___rec 1311 TGGGCGAAAGCGGATCGAGACGTATTGGGTAAAGCACGACATGCTCGAAC 1360
BSNT_02602___ 1361 GTATATTGGCATTTGTCGAAAAAGAATTAAAGCAAGGCAGGCAGGCTTAT 1410
|.||..|.||.|||.||||.||||||.|.||..|||||||.|||||.|||
BL02311___rec 1361 GGATTCTCGCGTTTATCGATAAAGAACTGAAAAAAGGCAGACAGGCGTAT 1410
BSNT_02602___ 1411 ATCATCTGTCCGCTGATTGAAGAATCAGACAAGCTTGATGTGCAAAACGC 1460
.|.||||||||..||||||||||.||.||||||||.||.||.|||||.||
BL02311___rec 1411 GTGATCTGTCCCTTGATTGAAGAGTCGGACAAGCTCGACGTTCAAAATGC 1460
BSNT_02602___ 1461 CATTGACGTGTACAATATGCTTTCTGATATTTTTCGGGGAAAATGGAATG 1510
.|||||.|||.|||..|||||..||.||...||..||||||.||||.|..
BL02311___rec 1461 AATTGATGTGCACAGCATGCTGACTCATGCCTTCAGGGGAAGATGGCAGA 1510
BSNT_02602___ 1511 TCGGCCTTATGCATGGAAAGCTGCATTC---CGATGAAAAAGACCAGGTC 1557
||||.||.|||||.||||||||| || .||.||.|||||.|||||.
BL02311___rec 1511 TCGGTCTCATGCACGGAAAGCTG---TCAAATGACGAGAAAGAACAGGTA 1557
BSNT_02602___ 1558 ATGAGAGAATTCAGCGCAAATCACTGTCAAATTCTCGTATCAACCACTGT 1607
|||||..|.||||||..|||..|.||.||.||||||||.||.||.||.||
BL02311___rec 1558 ATGAGGCAGTTCAGCAAAAACGAATGCCAGATTCTCGTTTCCACAACCGT 1607
BSNT_02602___ 1608 TGTGGAGGTTGGCGTGAATGTTCCGAATGCAACAATTATGGTGATTTATG 1657
.||.||.||.||.||.||.|||||||||||.||..|.|||.||||.||||
BL02311___rec 1608 CGTTGAAGTCGGGGTAAACGTTCCGAATGCGACGGTCATGCTGATCTATG 1657
BSNT_02602___ 1658 ACGCCGACCGTTTCGGACTATCACAGCTTCACCAGCTGCGCGGCCGTGTT 1707
|.||||||||.|||||.||.||.|||||.||.|||||.||||||||.||.
BL02311___rec 1658 ATGCCGACCGGTTCGGTCTTTCCCAGCTGCATCAGCTTCGCGGCCGGGTC 1707
BSNT_02602___ 1708 GGACGGGGTGAGCATCAATCTTTCTGTATTCTGATGGCTGATCCAAAATC 1757
||||||||.||.||.||.||.|..||.||.||||||||.||.||.|||||
BL02311___rec 1708 GGACGGGGCGATCACCAGTCGTATTGCATCCTGATGGCAGACCCGAAATC 1757
BSNT_02602___ 1758 AGAAACAGGGAAAGAACGGATGAGGATCATGTCGGAGACCAATGACGGTT 1807
.||.||.||.|||||.||.|||||.||||||||.|||||.|..|||||.|
BL02311___rec 1758 TGAGACGGGAAAAGAGCGCATGAGCATCATGTCTGAGACGACGGACGGCT 1807
BSNT_02602___ 1808 TCGAGCTGTCTGAAAAGGATCTGGAACTGAGAGGTCCCGGTGATTTCTTC 1857
|.|||||.||||||||.|||||.|||||.|||||.|||||.||.||.|||
BL02311___rec 1808 TTGAGCTTTCTGAAAAAGATCTTGAACTCAGAGGGCCCGGGGACTTTTTC 1857
BSNT_02602___ 1858 GGGAAAAAACAAAGCGGAATGCCGGAATTTAAAGTGGCGGACATGGTTCA 1907
||.||.|||||.|||||.||||||||.||||||||.||.|||||||||||
BL02311___rec 1858 GGCAAGAAACAGAGCGGGATGCCGGAGTTTAAAGTCGCCGACATGGTTCA 1907
BSNT_02602___ 1908 TGATTACAGAGCGCTTGAAACGGCAAGGCAG-GATGCTGC-GAATCTTGT 1955
.||.|||.|.|||||.|||||||||| |.|| ||.||||| ||| |||||
BL02311___rec 1908 CGACTACCGCGCGCTGGAAACGGCAA-GAAGAGACGCTGCAGAA-CTTGT 1955
BSNT_02602___ 1956 GGCTTCTGACGCGTTCTGGAAGGA-GCCGGAATACGCTGTGTTAA----- 1999
..||||..|.||||||||||.||| ||| ||||| |||
BL02311___rec 1956 CTCTTCAAAAGCGTTCTGGACGGATGCC-GAATA--------TAAAAGCC 1996
BSNT_02602___ 2000 ---GAGATGAATTGCTGAAGAGCGGAGTAATGGACGGGGAAAAATTAAGC 2046
|.||..|.||||..||.|||||.||.||||||||.||.||..|.|||
BL02311___rec 1997 TGCGGGAACACTTGCAAAACAGCGGGGTTATGGACGGAGAGAAGCTGAGC 2046
BSNT_02602___ 2047 TGA 2049
|||
BL02311___rec 2047 TGA 2049
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