Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02601 and BL02310
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_02601___sdaAA.1.5803.seq
# -bsequence dna-align/BL02310___sdaAA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02601___sdaAA-BL02310___sdaAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02601___sdaAA-BL02310___sdaAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02601___sdaAA
# 2: BL02310___sdaAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 910
# Identity: 692/910 (76.0%)
# Similarity: 692/910 (76.0%)
# Gaps: 14/910 ( 1.5%)
# Score: 2551.5
#
#
#=======================================
BSNT_02601___ 1 ATGTTTCGTAATGTAAAAGAATTAATTGAGATTACTAAAGAAAAACAA-A 49
||||||||.|||||.||||||||||||.|..|.|| ||||.||||.|| .
BL02310___sda 1 ATGTTTCGAAATGTGAAAGAATTAATTCAACTGAC-AAAGGAAAAGAACG 49
BSNT_02601___ 50 TATTGATCTCTGATGTGATGATAGCTCAAGAGATGGAAGTAACAGAAAAA 99
|.|..||||||||..|.|||||..|.||.|||||.||.||.||||.....
BL02310___sda 50 TGTCCATCTCTGAAATCATGATCACACAGGAGATCGAGGTGACAGGCCGG 99
BSNT_02601___ 100 ACAAAAGAGGACATTTTTCAGCAGATGGATCATAACCTGTCTGTTATGGA 149
||....||.||.||.||..||||||||||....|||.||.||||.|||||
BL02310___sda 100 ACGCGGGAAGATATATTCAAGCAGATGGAAGCCAACTTGGCTGTCATGGA 149
BSNT_02601___ 150 AGCGGCGGTTCAGAAAGGACTCGAGGGAGT--TA-CGAGCCAAACGGGCT 196
||..||.|||||.|||||..|.|||||.|| || || ||..|.||.|
BL02310___sda 150 AGACGCTGTTCAAAAAGGCATTGAGGGCGTCGTATCG---CACTCCGGAT 196
BSNT_02601___ 197 TAACAGGCGGAGATGCCGTTAAATTGCAGGCCTATATTCGATCAGGAAAA 246
|.||.||||||||.||||||||..|.||||||||..||..|||.||.|||
BL02310___sda 197 TGACGGGCGGAGACGCCGTTAAGCTTCAGGCCTACCTTAAATCGGGCAAA 246
BSNT_02601___ 247 AGCCTGTCTGGCCCGCTG--ATTTTAGATGCTGT-ATCGAAAGCCGTTGC 293
.|.|||||.|| .|.|| ||..|.||.||||| |.| |||||.||.||
BL02310___sda 247 GGGCTGTCAGG--GGATGTCATCCTTGACGCTGTCAGC-AAAGCGGTAGC 293
BSNT_02601___ 294 AACAAATGAAGTAAATGCAGCAATGGGAACCATCTGTGCGACACCGACTG 343
.|||||||||||.||.||.||.||||||||.||.||.||.||.|||||.|
BL02310___sda 294 GACAAATGAAGTCAACGCTGCGATGGGAACGATTTGCGCAACGCCGACAG 343
BSNT_02601___ 344 CAGGTTCTGCCGGTGTGGTGCCCGGTACGTTATTTGCTGTAAAAGAAAAG 393
|.||.||.|||||.||.||.||.||.|||.|.|||||.||||||||.||.
BL02310___sda 344 CCGGATCGGCCGGCGTTGTCCCGGGGACGCTCTTTGCGGTAAAAGAGAAA 393
BSNT_02601___ 394 CTGAATCCAACAAGAGAACAAATGATCCGCTTTTTGTTTACGGCCGGGGC 443
||..|.||.||.|.|||.||.|||.||||||||||.|||||..|.||.||
BL02310___sda 394 CTTCACCCGACGAAAGAGCAGATGGTCCGCTTTTTATTTACATCGGGAGC 443
BSNT_02601___ 444 TTTCGGATTTGTCGTGGCTAATAACGCAAGCATTTCCGGCGCCGCCGGAG 493
.||||||||.|||||.||.||.||.||.||||||||.||.||||||||||
BL02310___sda 444 GTTCGGATTCGTCGTTGCCAACAATGCGAGCATTTCGGGAGCCGCCGGAG 493
BSNT_02601___ 494 GATGTCAGGCAGAGGTTGGATCAGCTTCAGGCATGGCGGCTGCGGCCATT 543
|.||||||||.||.||.|||||.||.||.||||||||||||||.|||||.
BL02310___sda 494 GCTGTCAGGCTGAAGTCGGATCGGCCTCGGGCATGGCGGCTGCCGCCATC 543
BSNT_02601___ 544 GTTGAAATGGCAGGAGGAACACCCGAACAAAGCGCGGAAGCCATGGCCAT 593
||.||||||||.||.|||||.||.|||||..||||.|||||.||||||||
BL02310___sda 544 GTCGAAATGGCGGGCGGAACCCCTGAACAGTGCGCCGAAGCGATGGCCAT 593
BSNT_02601___ 594 TACATTAAAAAATATGCTAGGCCTCGTGTGCGACCCTGTTGCAGGGCTTG 643
..|.||||||||..|.||.||.||.||.|||||.|||||.||||||||.|
BL02310___sda 594 CGCTTTAAAAAACGTACTCGGTCTAGTCTGCGATCCTGTCGCAGGGCTCG 643
BSNT_02601___ 644 TTGAGGTGCCTTGCGTGAAACGGAATGCGATGGGCGCGTCAAATGCAATG 693
||||||||||.||.|||||.|||||.|||||||||||..|.|||||.|||
BL02310___sda 644 TTGAGGTGCCGTGTGTGAAGCGGAACGCGATGGGCGCAGCCAATGCGATG 693
BSNT_02601___ 694 ATTGCCGCTGATATGGCATTGGCGGGCATTACAAGCCGTATTCCATGTGA 743
.|.||.|||||||||||..|.||.||||||||||||||.||||||||.||
BL02310___sda 694 GTCGCGGCTGATATGGCGCTTGCCGGCATTACAAGCCGCATTCCATGCGA 743
BSNT_02601___ 744 TGAGGTTATCGATGCCATGTATAAAATAGGCCAAACGATGCCAACTGCAC 793
|||.||.||||||||.|||||.|||||.||.||.||||||||.||.||||
BL02310___sda 744 TGAAGTGATCGATGCGATGTACAAAATCGGACAGACGATGCCGACGGCAC 793
BSNT_02601___ 794 TTAGAGAAACAGGCCAGGGCGGTTTAGCGGCAACACCGACAGGAAGAGAA 843
|.||.||||||||||.|||||||.|.||.|||||||||||.||.|.||||
BL02310___sda 794 TGAGGGAAACAGGCCGGGGCGGTCTTGCCGCAACACCGACGGGCAAAGAA 843
BSNT_02601___ 844 TTAGAGAAAAAAATTTTCGGAGGAGCGCTAGGTTCACGTGAAACAACATC 893
||.|||||||||||.||||||||||||..||.|.||||||.||||..|||
BL02310___sda 844 TTGGAGAAAAAAATATTCGGAGGAGCGTCAGCTGCACGTGGAACACAATC 893
BSNT_02601___ 894 AGCAAACTAG 903
.||||..|||
BL02310___sda 894 TGCAACTTAG 903
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