Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02600 and BL02309
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:16
# Commandline: needle
# -asequence dna-align/BSNT_02600___sdaAB.1.5803.seq
# -bsequence dna-align/BL02309___sdaAB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02600___sdaAB-BL02309___sdaAB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02600___sdaAB-BL02309___sdaAB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02600___sdaAB
# 2: BL02309___sdaAB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 686
# Identity: 488/686 (71.1%)
# Similarity: 488/686 (71.1%)
# Gaps: 46/686 ( 6.7%)
# Score: 1714.0
#
#
#=======================================
BSNT_02600___ 1 ATGAAATACAGAAGCGTTTTTGATATTATCGGCCCGGTTATGATCGGTCC 50
|||||.||||||||.||.||||||||||||||.||.||.||||||||.||
BL02309___sda 1 ATGAAGTACAGAAGTGTGTTTGATATTATCGGGCCCGTCATGATCGGACC 50
BSNT_02600___ 51 GTCCAGCTCTCATACAGCGGGAGCTGCTAGAATCGGGAGAGTGGCCAGAA 100
|||.||.||||||||.||.||.||.||.||||||||.|||||.|||||||
BL02309___sda 51 GTCAAGTTCTCATACGGCCGGCGCGGCCAGAATCGGCAGAGTCGCCAGAA 100
BSNT_02600___ 101 GTTTATTTGGCAGAGAGCCTGAGCGCATCATTGTATCTTTTTACGGCTCG 150
|..|.|||||.||.|||||..|.|..||.||||||||..|.|||||.||.
BL02309___sda 101 GCGTGTTTGGGAGGGAGCCGAAACAAATTATTGTATCGCTCTACGGTTCT 150
BSNT_02600___ 151 TTTGCGGAAACGTATAAGGGCCACGGCACAGATGTCGCGATTATCGGCGG 200
|||||.|||||||||||.||.||.||.||||||||.|||||.||||||||
BL02309___sda 151 TTTGCCGAAACGTATAAAGGACATGGAACAGATGTTGCGATCATCGGCGG 200
BSNT_02600___ 201 ATTGCTTGATTTTGATACATTCGATGAACG-------GATTAAAACCG-C 242
..|..|.||||||||||||||.||||||.| ||||..|.||| |
BL02309___sda 201 CCTTTTGGATTTTGATACATTTGATGAAAGAATCAAAGATTCGATCCGTC 250
BSNT_02600___ 243 TATACAAATTGCAGAAGCTAAAGGAATTGATATAGAGTTTCGGGTAGAAG 292
|| ||.||||..||.|||||.|..||.|||||.||||.|||||
BL02309___sda 251 TA--------GCCGAAGAAAAGGGAATCGCCATCGAGTTCCGGGAAGAAG 292
BSNT_02600___ 293 ACGCAGTCCCGGTCCATCCGAACACAACAAAAATCACCATTTCTGATGA- 341
|.||.||.|||...|||||.||.|||.|....|||..|||.||||||||
BL02309___sda 293 AAGCGGTACCGAAGCATCCCAATACAGCCCGCATCCTCATCTCTGATGAT 342
BSNT_02600___ 342 AAAGGGTGAGCTGGAACTGACGGGTATTTCGATTGGCGGAGGAAAGATTG 391
.||||.| ..||.|||||..|.||.||.||.||.||||||||.||.||.|
BL02309___sda 343 GAAGGCT-CCCTTGAACTCGCAGGCATCTCAATCGGCGGAGGGAAAATCG 391
BSNT_02600___ 392 AAATCACAGAATTGAATGGTTTTGAGCTCCGGCTGTCAGGAAATCATCCG 441
|.||||..||..||||.||.||.||.|||.|..|.||.||.|||||.||.
BL02309___sda 392 AGATCATTGAGCTGAACGGCTTCGAACTCAGATTATCGGGTAATCACCCC 441
BSNT_02600___ 442 GCCATATTAGTTGTTCATAATGACAAGTTTGGCACAATTGCCGGTGTTGC 491
||.||.|||||.||.|||||.|||...|..||.||.|||||.||.||.||
BL02309___sda 442 GCTATTTTAGTCGTCCATAACGACCGCTACGGAACGATTGCAGGCGTAGC 491
BSNT_02600___ 492 CAATGTTCTGGCGAAATTTTCAATCAACGTAGGACATATGGAAGTAGCCC 541
||||||.||.|||||.||..||||||||.|.||.|||||||||||.||||
BL02309___sda 492 CAATGTGCTTGCGAAGTTCGCAATCAACATCGGCCATATGGAAGTTGCCC 541
BSNT_02600___ 542 GGAAAGATATCGGCCAGCTTGCGCTGATGACAATAGAGGTCGACCAAAAT 591
|.|||||..||||||||...|||||.|||||.||.||||||||.||||..
BL02309___sda 542 GCAAAGACGTCGGCCAGGAAGCGCTCATGACGATTGAGGTCGATCAAACG 591
BSNT_02600___ 592 ATTGACGACCACATTCTCGACGAGCTGT------CGAA--------GCTG 627
||||| || || ||||| .||| ||||
BL02309___sda 592 ATTGA-----------TC--CG-GCTGTTTTTGATGAATTGAGAGCGCTG 627
BSNT_02600___ 628 CCGAATATTATTCAAGTGACAAAGATTGCTGACTAG 663
|||||.||.|||.|.|||||..||||.||||||||.
BL02309___sda 628 CCGAACATCATTGAGGTGACCCAGATCGCTGACTAA 663
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