Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02586 and BL02298
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_02586___fmt.1.5803.seq
# -bsequence dna-align/BL02298___fmt.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02586___fmt-BL02298___fmt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02586___fmt-BL02298___fmt.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02586___fmt
# 2: BL02298___fmt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 997
# Identity: 714/997 (71.6%)
# Similarity: 714/997 (71.6%)
# Gaps: 89/997 ( 8.9%)
# Score: 2514.0
#
#
#=======================================
BSNT_02586___ 1 ATGACGAGAATCGTATTTATGGGAACGCCGGATTTTTCAGTTCCTGTTTT 50
|||||.||.|||||.|||||||||||||||||||||||.||.||.||..|
BL02298___fmt 1 ATGACAAGGATCGTTTTTATGGGAACGCCGGATTTTTCCGTCCCGGTGCT 50
BSNT_02586___ 51 AAGAACCCTGATTGAGGACGGATATGAAGTAGTGGGGGTCGTCACACAGC 100
..|.||..|||||||.|||||.|||||.||||||||.||||||||.||||
BL02298___fmt 51 CGGCACATTGATTGATGACGGCTATGAGGTAGTGGGTGTCGTCACCCAGC 100
BSNT_02586___ 101 CGGACCGTCCGAAGGGCAGAAAAAAAGTCATGACACCTCCTCCGGTCAAG 150
|.|||||.|||||.|||||||||||.||.|||||.||.||.||.||||||
BL02298___fmt 101 CTGACCGCCCGAAAGGCAGAAAAAAGGTGATGACTCCGCCGCCTGTCAAG 150
BSNT_02586___ 151 GAAGAGGCATTGCGTCACGGCATCCCGGTTCTTCAGCCGGAAAAAGTCAG 200
||.||.||..||||.|.||||||.||.||.||.|||||.||.|||||.||
BL02298___fmt 151 GAGGAAGCGCTGCGCCGCGGCATTCCCGTGCTCCAGCCTGAGAAAGTGAG 200
BSNT_02586___ 201 ATTGACAGAA---GAAATTGAGAAAGTGCTGGCATTAAAGCCTG-ACCTG 246
|..|||| ||||..||.||..|..|||| ||.|| |||.|
BL02298___fmt 201 ---GGAAGAAGCGGAAACGGACAAGATTTTGGC------GCTTGAACCCG 241
BSNT_02586___ 247 ATT-----GTAACGGCGGCATTCGGACAAATTTTGCCTAAAGAGCTTCTC 291
||| ||||||||||||||||||||.||..||||.|||.||||.|||
BL02298___fmt 242 ATTTAATCGTAACGGCGGCATTCGGACAGATCCTGCCGAAAAAGCTCCTC 291
BSNT_02586___ 292 GACAGTCCAAAGTACGGCTGCATTAACGTTCACGCATCCCTTTTGCCGGA 341
||...|||.||.||||||||.||.||.||.||.||.||.|||.|||||||
BL02298___fmt 292 GATTATCCGAAATACGGCTGTATCAATGTCCATGCCTCTCTTCTGCCGGA 341
BSNT_02586___ 342 ACTGCGCGGCGGTGCTCCGATTCATTATTCCATTCT-GCAGGGAAAGAAG 390
.||||||||.||.||.|||||.|||||..||||||| |.|||.|||| ||
BL02298___fmt 342 GCTGCGCGGAGGAGCCCCGATCCATTACGCCATTCTGGAAGGCAAAG-AG 390
BSNT_02586___ 391 AAAACCGGGGTTACCATTATGTATATGGTAGAAAAATTGGATGCGGGCGA 440
|||||.||.||.||.||.|||||.|||||.||||||||||||||.|||||
BL02298___fmt 391 AAAACAGGCGTGACGATCATGTACATGGTCGAAAAATTGGATGCAGGCGA 440
BSNT_02586___ 441 TATGATCTCAAAAGTGGAAGTGGACATTGAAGAAACCGACAATGTCGGAA 490
||||.||.|.||.||.|||||.|||||.||||||||.||.||||||||.|
BL02298___fmt 441 TATGCTCGCCAAGGTTGAAGTTGACATCGAAGAAACAGATAATGTCGGCA 490
BSNT_02586___ 491 CACTGCACGATAAATTAAGCGCGGCTGGCGCGAAGCTATTGTCAGAAACG 540
|.||.||||||||..|.|||..|||.||.||...|||..|.||.||||||
BL02298___fmt 491 CGCTCCACGATAAGCTGAGCAAGGCCGGAGCTGCGCTTCTTTCCGAAACG 540
BSNT_02586___ 541 GTTCCAAACGTTATTGCCGGCAGCATTT------CACCTGAAAAGCAGGA 584
|||||.|...|.||||.||| || |.||.|||||.|||||
BL02298___fmt 541 GTTCCGAGAATCATTGACGG------TTCGGTAACCCCGGAAAAACAGGA 584
BSNT_02586___ 585 TGAAGAGAAAGCGACATACGCGCCTAACATTAAAAGAGAGCAAGAGCTGC 634
||||.|||||||||||||||||||.|||||||||.|.|||||.||.|||.
BL02298___fmt 585 TGAACAGAAAGCGACATACGCGCCGAACATTAAACGCGAGCAGGAACTGA 634
BSNT_02586___ 635 TCGACTGGTCCAGAACGGGCGAAGAGCTTTACAACCAGATCCGCGGCTTA 684
||||||||||.|...|.|||||||..||.||||||||..||.|.|||||.
BL02298___fmt 635 TCGACTGGTCTAAGCCCGGCGAAGTCCTGTACAACCAAGTCAGAGGCTTG 684
BSNT_02586___ 685 AATCCATGGCCTGTTGCCTATACGACG--CTT-AATGGACAAAACTTGAA 731
|||||.||||||||.|| |||| ||| ||| ||.||.||.|...||||
BL02298___fmt 685 AATCCTTGGCCTGTCGC--ATAC-ACGGTCTTAAACGGCCAGACGCTGAA 731
BSNT_02586___ 732 AGTGTGGGAATCCAAAAAAACACCCGCACCAACC----AAAGCTGAGCCA 777
|||.||||...|.|||||| ..||||.| ||| ||
BL02298___fmt 732 AGTATGGGCCGCGAAAAAA-------TGCCAAGCCTTAAAA-------CA 767
BSNT_02586___ 778 GGCACAG----------TCGTTGCGGTTGAAAAGGAAGGGATTATCGTTG 817
||||.|| ||||..|.||||||||.||.||.|||.||||.|
BL02298___fmt 768 GGCAGAGCCGGGGGAGATCGTCACCGTTGAAAAAGACGGCATTGTCGTCG 817
BSNT_02586___ 818 CCACAGGTAACGAGACGGCTCTGTT---ATTAACCGAACTCCAGCCGGCA 864
|.||.||.||.||.||.|| ||| ||||||.|||.|.|||||.||.
BL02298___fmt 818 CAACCGGAAATGACACCGC---GTTAAAATTAACGGAAGTGCAGCCTGCC 864
BSNT_02586___ 865 GGCAAAAAACGAATGAAAGGC-GAAGACTTTGTGCGAGGCGCTCATGTTG 913
|||||||||.||||| ||||| |||||.|||||..|.||.||...|.||.
BL02298___fmt 865 GGCAAAAAAAGAATG-AAGGCTGAAGATTTTGTCAGGGGAGCGGGTCTTC 913
BSNT_02586___ 914 AAGTCGG--TGA---TGTGTTAGGAGTAAACAATGAAAAA-AACTAG 954
|||.||| ||| ||.||.|.| ||.|||||||| ||
BL02298___fmt 914 AAGCCGGAATGAAATTGGGTCATG-----ACGATGAAAAATAA---- 951
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