Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02586 and BL02298

See Amino acid alignment / Visit BSNT_02586 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:14
# Commandline: needle
#    -asequence dna-align/BSNT_02586___fmt.1.5803.seq
#    -bsequence dna-align/BL02298___fmt.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02586___fmt-BL02298___fmt.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02586___fmt-BL02298___fmt.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02586___fmt
# 2: BL02298___fmt
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 997
# Identity:     714/997 (71.6%)
# Similarity:   714/997 (71.6%)
# Gaps:          89/997 ( 8.9%)
# Score: 2514.0
# 
#
#=======================================

BSNT_02586___      1 ATGACGAGAATCGTATTTATGGGAACGCCGGATTTTTCAGTTCCTGTTTT     50
                     |||||.||.|||||.|||||||||||||||||||||||.||.||.||..|
BL02298___fmt      1 ATGACAAGGATCGTTTTTATGGGAACGCCGGATTTTTCCGTCCCGGTGCT     50

BSNT_02586___     51 AAGAACCCTGATTGAGGACGGATATGAAGTAGTGGGGGTCGTCACACAGC    100
                     ..|.||..|||||||.|||||.|||||.||||||||.||||||||.||||
BL02298___fmt     51 CGGCACATTGATTGATGACGGCTATGAGGTAGTGGGTGTCGTCACCCAGC    100

BSNT_02586___    101 CGGACCGTCCGAAGGGCAGAAAAAAAGTCATGACACCTCCTCCGGTCAAG    150
                     |.|||||.|||||.|||||||||||.||.|||||.||.||.||.||||||
BL02298___fmt    101 CTGACCGCCCGAAAGGCAGAAAAAAGGTGATGACTCCGCCGCCTGTCAAG    150

BSNT_02586___    151 GAAGAGGCATTGCGTCACGGCATCCCGGTTCTTCAGCCGGAAAAAGTCAG    200
                     ||.||.||..||||.|.||||||.||.||.||.|||||.||.|||||.||
BL02298___fmt    151 GAGGAAGCGCTGCGCCGCGGCATTCCCGTGCTCCAGCCTGAGAAAGTGAG    200

BSNT_02586___    201 ATTGACAGAA---GAAATTGAGAAAGTGCTGGCATTAAAGCCTG-ACCTG    246
                        |..||||   ||||..||.||..|..||||      ||.|| |||.|
BL02298___fmt    201 ---GGAAGAAGCGGAAACGGACAAGATTTTGGC------GCTTGAACCCG    241

BSNT_02586___    247 ATT-----GTAACGGCGGCATTCGGACAAATTTTGCCTAAAGAGCTTCTC    291
                     |||     ||||||||||||||||||||.||..||||.|||.||||.|||
BL02298___fmt    242 ATTTAATCGTAACGGCGGCATTCGGACAGATCCTGCCGAAAAAGCTCCTC    291

BSNT_02586___    292 GACAGTCCAAAGTACGGCTGCATTAACGTTCACGCATCCCTTTTGCCGGA    341
                     ||...|||.||.||||||||.||.||.||.||.||.||.|||.|||||||
BL02298___fmt    292 GATTATCCGAAATACGGCTGTATCAATGTCCATGCCTCTCTTCTGCCGGA    341

BSNT_02586___    342 ACTGCGCGGCGGTGCTCCGATTCATTATTCCATTCT-GCAGGGAAAGAAG    390
                     .||||||||.||.||.|||||.|||||..||||||| |.|||.|||| ||
BL02298___fmt    342 GCTGCGCGGAGGAGCCCCGATCCATTACGCCATTCTGGAAGGCAAAG-AG    390

BSNT_02586___    391 AAAACCGGGGTTACCATTATGTATATGGTAGAAAAATTGGATGCGGGCGA    440
                     |||||.||.||.||.||.|||||.|||||.||||||||||||||.|||||
BL02298___fmt    391 AAAACAGGCGTGACGATCATGTACATGGTCGAAAAATTGGATGCAGGCGA    440

BSNT_02586___    441 TATGATCTCAAAAGTGGAAGTGGACATTGAAGAAACCGACAATGTCGGAA    490
                     ||||.||.|.||.||.|||||.|||||.||||||||.||.||||||||.|
BL02298___fmt    441 TATGCTCGCCAAGGTTGAAGTTGACATCGAAGAAACAGATAATGTCGGCA    490

BSNT_02586___    491 CACTGCACGATAAATTAAGCGCGGCTGGCGCGAAGCTATTGTCAGAAACG    540
                     |.||.||||||||..|.|||..|||.||.||...|||..|.||.||||||
BL02298___fmt    491 CGCTCCACGATAAGCTGAGCAAGGCCGGAGCTGCGCTTCTTTCCGAAACG    540

BSNT_02586___    541 GTTCCAAACGTTATTGCCGGCAGCATTT------CACCTGAAAAGCAGGA    584
                     |||||.|...|.||||.|||      ||      |.||.|||||.|||||
BL02298___fmt    541 GTTCCGAGAATCATTGACGG------TTCGGTAACCCCGGAAAAACAGGA    584

BSNT_02586___    585 TGAAGAGAAAGCGACATACGCGCCTAACATTAAAAGAGAGCAAGAGCTGC    634
                     ||||.|||||||||||||||||||.|||||||||.|.|||||.||.|||.
BL02298___fmt    585 TGAACAGAAAGCGACATACGCGCCGAACATTAAACGCGAGCAGGAACTGA    634

BSNT_02586___    635 TCGACTGGTCCAGAACGGGCGAAGAGCTTTACAACCAGATCCGCGGCTTA    684
                     ||||||||||.|...|.|||||||..||.||||||||..||.|.|||||.
BL02298___fmt    635 TCGACTGGTCTAAGCCCGGCGAAGTCCTGTACAACCAAGTCAGAGGCTTG    684

BSNT_02586___    685 AATCCATGGCCTGTTGCCTATACGACG--CTT-AATGGACAAAACTTGAA    731
                     |||||.||||||||.||  |||| |||  ||| ||.||.||.|...||||
BL02298___fmt    685 AATCCTTGGCCTGTCGC--ATAC-ACGGTCTTAAACGGCCAGACGCTGAA    731

BSNT_02586___    732 AGTGTGGGAATCCAAAAAAACACCCGCACCAACC----AAAGCTGAGCCA    777
                     |||.||||...|.||||||       ..||||.|    |||       ||
BL02298___fmt    732 AGTATGGGCCGCGAAAAAA-------TGCCAAGCCTTAAAA-------CA    767

BSNT_02586___    778 GGCACAG----------TCGTTGCGGTTGAAAAGGAAGGGATTATCGTTG    817
                     ||||.||          ||||..|.||||||||.||.||.|||.||||.|
BL02298___fmt    768 GGCAGAGCCGGGGGAGATCGTCACCGTTGAAAAAGACGGCATTGTCGTCG    817

BSNT_02586___    818 CCACAGGTAACGAGACGGCTCTGTT---ATTAACCGAACTCCAGCCGGCA    864
                     |.||.||.||.||.||.||   |||   ||||||.|||.|.|||||.||.
BL02298___fmt    818 CAACCGGAAATGACACCGC---GTTAAAATTAACGGAAGTGCAGCCTGCC    864

BSNT_02586___    865 GGCAAAAAACGAATGAAAGGC-GAAGACTTTGTGCGAGGCGCTCATGTTG    913
                     |||||||||.||||| ||||| |||||.|||||..|.||.||...|.||.
BL02298___fmt    865 GGCAAAAAAAGAATG-AAGGCTGAAGATTTTGTCAGGGGAGCGGGTCTTC    913

BSNT_02586___    914 AAGTCGG--TGA---TGTGTTAGGAGTAAACAATGAAAAA-AACTAG    954
                     |||.|||  |||   ||.||.|.|     ||.|||||||| ||    
BL02298___fmt    914 AAGCCGGAATGAAATTGGGTCATG-----ACGATGAAAAATAA----    951


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