Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02585 and BL02297
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_02585___def.1.5803.seq
# -bsequence dna-align/BL02297___def.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02585___def-BL02297___def.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02585___def-BL02297___def.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02585___def
# 2: BL02297___def
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity: 365/495 (73.7%)
# Similarity: 365/495 (73.7%)
# Gaps: 24/495 ( 4.8%)
# Score: 1275.0
#
#
#=======================================
BSNT_02585___ 1 TTGGCAGTAAAAAAGGTCGTCACACATCCTGCGGAGGTTTTGGAAACACC 50
||||||||||||..|.||||.||..||||.|||||||||.|.||.||.||
BL02297___def 1 TTGGCAGTAAAACCGATCGTAACGTATCCGGCGGAGGTTCTTGAGACCCC 50
BSNT_02585___ 51 TGCGGAAACCGTGACTGT-TTTTGATAAAAAGCTAAAAAAACTGCTTGAT 99
|||.|||.||||..| || ||||||||||....||||.|||||.||.||.
BL02297___def 51 TGCCGAACCCGTTGC-GTCTTTTGATAAATCATTAAAGAAACTACTCGAC 99
BSNT_02585___ 100 GATATGTACGACACCATGCTTGAAATGGATGGTGTCGGACTGGCAGCGCC 149
.|||||||.||.||.||||||||..||||.||.|||||||||||.||.||
BL02297___def 100 AATATGTATGATACGATGCTTGAGCTGGACGGAGTCGGACTGGCCGCTCC 149
BSNT_02585___ 150 GCAAATCGGCATTTTAAAAAGAGCGGCCGTTGTAGATATCGGGGATGACA 199
||||||||||.|||.||||||||||||.||.||.||||||||.|||||||
BL02297___def 150 GCAAATCGGCGTTTCAAAAAGAGCGGCAGTCGTCGATATCGGCGATGACA 199
BSNT_02585___ 200 GAGGGAGAATTGATCTCGTTAATCCTGAAATTTTAGAAAGA-AGCGGCGA 248
..||.||||||||.||.||.||.||.||..|..|.| |||| |||||.||
BL02297___def 200 CGGGAAGAATTGAACTGGTCAACCCGGAGGTCATCG-AAGAGAGCGGTGA 248
BSNT_02585___ 249 GCAAACCGGAATTGAAGGATGCTTGAGCTTTCCTGGCGTCTAT--GGTGA 296
.|||||.||...||||||.||.||||||||||||| .||||| |||||
BL02297___def 249 ACAAACGGGTCCTGAAGGCTGTTTGAGCTTTCCTG--ATCTATACGGTGA 296
BSNT_02585___ 297 TGTCAAACGTGCCGATTATGTCAAAGT----GCGTGCGTTTAACCGTCAG 342
.||.||.|||.||||||||||.||.|| ||||.|| ||||.|..
BL02297___def 297 AGTGAAGCGTTCCGATTATGTAAAGGTCAAGGCGTTCG----ACCGCCGC 342
BSNT_02585___ 343 GGAAAACCGTTCATTCTGGAAGCGCGA-GGCTTTTTAGCAAGAGCCGTGC 391
||.||||||||.|...|.||||| .|| ||||||||.||..|.||..|||
BL02297___def 343 GGGAAACCGTTTACGATTGAAGC-TGAGGGCTTTTTGGCGCGTGCGCTGC 391
BSNT_02585___ 392 AGCATGAAATGGACCACTTAGACGGTGTGCTGTTTACATCTAAAATAA-- 439
.|||.|||||.|||||.||.||||||.|..|.||.|||||.|||.|||
BL02297___def 392 TGCACGAAATCGACCATTTGGACGGTATTTTATTCACATCAAAAGTAACG 441
BSNT_02585___ 440 -GTAAATACTATACAGAAGATGAACTAGCGGATATGGAAGGATGA 483
|..|.||..||.|.||| |||||.|.|||.||||||||||||
BL02297___def 442 CGCTATTATGATGCGGAA---GAACTTGAGGAAATGGAAGGATGA 483
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