Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02577 and BL02291
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:14
# Commandline: needle
# -asequence dna-align/BSNT_02577___yloC.1.5803.seq
# -bsequence dna-align/BL02291___yloC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02577___yloC-BL02291___yloC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02577___yloC-BL02291___yloC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02577___yloC
# 2: BL02291___yloC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 929
# Identity: 636/929 (68.5%)
# Similarity: 636/929 (68.5%)
# Gaps: 106/929 (11.4%)
# Score: 2075.0
#
#
#=======================================
BSNT_02577___ 1 ATGATACGAAGTATGACAGGCTTCGGCAGTGCAAGCAAAACACAAGACGA 50
||||||||.||||||||.||.||||||||.||.||||||||..|.||.|.
BL02291___ylo 1 ATGATACGGAGTATGACCGGTTTCGGCAGCGCGAGCAAAACGAAGGATGG 50
BSNT_02577___ 51 TCTCTCTGTAAGC-GTTGAACTTAAATCTGTGAACTACAGATTTAAAGAA 99
.||..|.| .||| |||||.||.||||||||.|||||..|.|||||||||
BL02291___ylo 51 GCTGACAG-CAGCTGTTGAGCTGAAATCTGTCAACTATCGGTTTAAAGAA 99
BSNT_02577___ 100 GTGAACGCTCGTTTGCCAAGGCCTTTGCTATATTTTGAAGATAAGCTGAA 149
||.|||||.||..|||||||.||||||||.|||||.|||||.||..|.||
BL02291___ylo 100 GTAAACGCCCGCATGCCAAGACCTTTGCTCTATTTAGAAGACAAAATAAA 149
BSNT_02577___ 150 ACAGACCATTCTGCAGCATATTCA----GCGCGGAAGAATTGAGCTTTTC 195
.||.||.|||.|..|.|||||.|| |.|||| .|.|||||.||.
BL02291___ylo 150 GCAAACGATTTTTAAACATATACAAAGGGGGCGG----CTGGAGCTGTTT 195
BSNT_02577___ 196 GTATCCGTTGACAGCGATATGCT-TGTTGA----GAAA----AGGCTTGA 236
||.|||||||||..|| |.||| ||.|.| |||| |||
BL02291___ylo 196 GTTTCCGTTGACGACG--AGGCTCTGGTCACCCGGAAAATCCAGG----- 238
BSNT_02577___ 237 AATTGATTGGCCGCTGCTCGATGAATTTGTCGC----AGCCGCGAGAGAT 282
||||.|||||||||||.||.|| ||..| |||||||.|.||.
BL02291___ylo 239 --TTGACTGGCCGCTGCTTGAAGA----GTACCAGAAAGCCGCGCGCGAA 282
BSNT_02577___ 283 ATGAAGAAAC-------GGTATCAATTATCTGCAG--AACCCGATGTAAT 323
||||| |.|| || .|.||||.|| |.|.||.|..||
BL02291___ylo 283 ATGAA-AGACCGCTGCGGG------CTTTCTGGAGACATCACGCTTCAA- 324
BSNT_02577___ 324 GGATTTCTTTAAGCTTGATCATGTCGTCCAGGTTCATGAAGAACAGACGC 373
||...||||.||.||||.||||||.||||.|||.|.|||||.|..|..|
BL02291___ylo 325 -GACGCCTTTCAGTTTGAGCATGTCATCCAAGTTGAAGAAGAGCCAATCC 373
BSNT_02577___ 374 AAAATGACAAGCTGGAGGCGTTGATTATCGATGCTGCAGAAGAAGCGGTA 423
|||||||||||||.||.|.|.|..|| ||| ||||||||
BL02291___ylo 374 AAAATGACAAGCTTGAAGAGGTTCTT-------CTG-----GAAGCGGT- 410
BSNT_02577___ 424 AAAGG-------TCT----CTGTGAA--ATGCGTGAAAAAGAGGGGCT-- 458
..||| ||| .||||.| |||||.|||...||.|||||
BL02291___ylo 411 CGAGGCTGCCGTTCTAGAATTGTGCAGCATGCGCGAAGCGGAAGGGCTGA 460
BSNT_02577___ 459 -GCTCTTAGCGA---AAGACTGCCTGATGCATATTGATCAGCTTGAAGAG 504
||| || |.||||||||...|||||||||...|||||||.||
BL02291___ylo 461 GGCT------GAAGGACGACTGCCTTCAGCATATTGAAAGGCTTGAAAAG 504
BSNT_02577___ 505 CTGGTGAGA-GAAACTGAATTGCTGGCTGCAGATGTCGT--ATCTCGTTA 551
|| |..||| ||.|..|.|..|||.|||.|..|.||||| |.|.| ||
BL02291___ylo 505 CT-GACAGACGACATCGCAGAGCTTGCTCCCAAGGTCGTCGACCAC--TA 551
BSNT_02577___ 552 CCGGGAACGGCTGTACGCCAGAATCAAAGAATGGACTGAAGACGTATTAG 601
.||||||||.||..|.||..|..|..||||||||.|...|||||...|.|
BL02291___ylo 552 TCGGGAACGCCTTGAGGCGCGGCTTGAAGAATGGTCAACAGACGGTCTCG 601
BSNT_02577___ 602 ATGAGAGCCGGCTTGTAACAGAATGCGCTATTTTTGCAGACCGCTCTGAT 651
||||.|||||.||..|.||.|||..|||..|.|||||||||||.||.|||
BL02291___ylo 602 ATGAAAGCCGCCTGCTGACGGAAGTCGCACTGTTTGCAGACCGTTCGGAT 651
BSNT_02577___ 652 ATCACTGAAGAGATTACAAGGCTGAAGAGCCATTTCGCCCAGTTTCGTGA 701
|||||.|||||..|.||.||||||||.|||||||||..||||||.||.||
BL02291___ylo 652 ATCACGGAAGAAGTGACGAGGCTGAAAAGCCATTTCCGCCAGTTCCGCGA 701
BSNT_02577___ 702 TATATT----AGCTAGTGGCGGAGCTGTCGGGCGCAAACTCGACTTTCTT 747
||| || ||| .||.|||||.|..|||.|.||.|||||.||.||.
BL02291___ylo 702 TAT-TTGCAAAGC---GGGAGGAGCCGCGGGGAGAAAGCTCGATTTCCTC 747
BSNT_02577___ 748 GTTCAGGAGCTCAATCGGGAAGCAAATACGATCGGCTCAAAAGCAAATGA 797
||.|||||||||||.||.|||||.||.||||||||.||||||||.|||||
BL02291___ylo 748 GTCCAGGAGCTCAACCGTGAAGCGAACACGATCGGTTCAAAAGCGAATGA 797
BSNT_02577___ 798 TCATCAGATCACAAAGCTTGTCGTTGAAATGAAAAGTTCTATTGAAAAAA 847
|||.|||||||||||.|.|||.||.|||||||||||.|||||||||||||
BL02291___ylo 798 TCACCAGATCACAAAACATGTGGTCGAAATGAAAAGCTCTATTGAAAAAA 847
BSNT_02577___ 848 TAAAAGAACAAGTGCAAAATATAGAATAG 876
|||||||||||||||||||||||||||||
BL02291___ylo 848 TAAAAGAACAAGTGCAAAATATAGAATAG 876
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