Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02568 and BL02285

See Amino acid alignment / Visit BSNT_02568 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence dna-align/BSNT_02568___cysC.1.5803.seq
#    -bsequence dna-align/BL02285___cysC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02568___cysC-BL02285___cysC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02568___cysC-BL02285___cysC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02568___cysC
# 2: BL02285___cysC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 617
# Identity:     450/617 (72.9%)
# Similarity:   450/617 (72.9%)
# Gaps:          46/617 ( 7.5%)
# Score: 1642.5
# 
#
#=======================================

BSNT_02568___      1 ---GTGACAAATCGCGATATTGTATGGCATGAAGCCTCTATCACAAAAGA     47
                        ||   ||||...||||||||.|||||||||||.||.||.||||||..
BL02285___cys      1 TTGGT---AAATAAAGATATTGTCTGGCATGAAGCGTCCATTACAAAACG     47

BSNT_02568___     48 AGAGTATCA-GCAAAAAAACAAGCATAAAAGCTCCATTCTCTGGCTGACA     96
                     .||.||||| |..|||||.||| |||||||||||.||..|.||||||||.
BL02285___cys     48 GGAATATCATGAGAAAAATCAA-CATAAAAGCTCAATCATTTGGCTGACG     96

BSNT_02568___     97 GGGTTAAGCGGCTCAGGCAAATCAACCATTGCCAACGCCGCTGCGAGAGA    146
                     ||.||||||||.|||||.||||||||.||||||||||||||||||.|.||
BL02285___cys     97 GGCTTAAGCGGTTCAGGAAAATCAACGATTGCCAACGCCGCTGCGCGTGA    146

BSNT_02568___    147 ATTGTTTGAGCAAGGCTACCAAGTCATTGTGCTGGACGGGGATAATATCC    196
                     .|||||||..|||||||||||.||||..|||||.|||||.||.||..||.
BL02285___cys    147 GTTGTTTGCACAAGGCTACCAGGTCACGGTGCTTGACGGCGACAACGTCA    196

BSNT_02568___    197 GTCACGGCCTAAATAGGGATCTTGGTTTTTCTGATGAAGACCGAAAAGAA    246
                     |.|||||.||.||.|.|||.||.||.|||||.|||||||||||.||.|||
BL02285___cys    197 GGCACGGGCTGAACAAGGACCTCGGGTTTTCCGATGAAGACCGGAAGGAA    246

BSNT_02568___    247 AACATCCGCCGGATCGGAGAGGTGGCGAAGCTTTTTGTTCAGCAGGGAAC    296
                     |||||||||||||||||.|||||.||||||||.|||||..|.|||||.||
BL02285___cys    247 AACATCCGCCGGATCGGCGAGGTTGCGAAGCTCTTTGTCGAACAGGGGAC    296

BSNT_02568___    297 CATTGTGATTACTGCTTTTATCTCTCCTTTCCGCGAGGACAGGCAACAGG    346
                     .||.||.|||||.||.||.||.||||||||            ..||.|.|
BL02285___cys    297 GATCGTCATTACGGCGTTCATTTCTCCTTT------------TAAAGAAG    334

BSNT_02568___    347 TTCGCG------------AGCTTGTGGAAGCGGGCGAATTTAATGAAGTC    384
                     .|||||            |||||||.||.|..|..||.|||.|.||||||
BL02285___cys    335 ATCGCGGGCTTGTCAGACAGCTTGTCGAGGAAGATGAGTTTCACGAAGTC    384

BSNT_02568___    385 TACATTAAATGCGACCTTGATATTTGTGAACAAAGAGATCCGAAAGGACT    434
                     ||..|.||||||||..|.|..|..||||||.|..|.||.|||||||| ||
BL02285___cys    385 TATGTGAAATGCGATTTGGCGACGTGTGAAGAGCGCGACCCGAAAGG-CT    433

BSNT_02568___    435 T-TACAAAAAAGCAAGAAACGGAGAGATTCCGTTCTTTACAGGAATTGAT    483
                     | |||||||||||.|||||||||||.|||||.||.||.|||||.||.|||
BL02285___cys    434 TGTACAAAAAAGCGAGAAACGGAGAAATTCCATTTTTCACAGGGATCGAT    483

BSNT_02568___    484 TCACCTTATGAAGAACCGGAAGCTCCAGAGCTCGTTCTTGATTCAGG-AC    532
                     ||.|||||||||||.||.|||.|.||.|||||.|||||||||.|||| .|
BL02285___cys    484 TCGCCTTATGAAGAGCCTGAAACGCCTGAGCTTGTTCTTGATACAGGCGC    533

BSNT_02568___    533 AGCATGACCGTGAAGCGTGTAAAAATCAGCTGATCGAGTTTGTTAAA---    579
                     | |||.||||.||||.|||.|||||.|||||..||.|.|..||.|||   
BL02285___cys    534 A-CATAACCGGGAAGAGTGCAAAAACCAGCTCGTCCAATACGTGAAAGAT    582

BSNT_02568___    580 CAAA--AATTGAGCTGA    594
                     ||||  ||.|.|     
BL02285___cys    583 CAAACGAAATAA-----    594


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.