Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02568 and BL02285
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence dna-align/BSNT_02568___cysC.1.5803.seq
# -bsequence dna-align/BL02285___cysC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02568___cysC-BL02285___cysC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02568___cysC-BL02285___cysC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02568___cysC
# 2: BL02285___cysC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 617
# Identity: 450/617 (72.9%)
# Similarity: 450/617 (72.9%)
# Gaps: 46/617 ( 7.5%)
# Score: 1642.5
#
#
#=======================================
BSNT_02568___ 1 ---GTGACAAATCGCGATATTGTATGGCATGAAGCCTCTATCACAAAAGA 47
|| ||||...||||||||.|||||||||||.||.||.||||||..
BL02285___cys 1 TTGGT---AAATAAAGATATTGTCTGGCATGAAGCGTCCATTACAAAACG 47
BSNT_02568___ 48 AGAGTATCA-GCAAAAAAACAAGCATAAAAGCTCCATTCTCTGGCTGACA 96
.||.||||| |..|||||.||| |||||||||||.||..|.||||||||.
BL02285___cys 48 GGAATATCATGAGAAAAATCAA-CATAAAAGCTCAATCATTTGGCTGACG 96
BSNT_02568___ 97 GGGTTAAGCGGCTCAGGCAAATCAACCATTGCCAACGCCGCTGCGAGAGA 146
||.||||||||.|||||.||||||||.||||||||||||||||||.|.||
BL02285___cys 97 GGCTTAAGCGGTTCAGGAAAATCAACGATTGCCAACGCCGCTGCGCGTGA 146
BSNT_02568___ 147 ATTGTTTGAGCAAGGCTACCAAGTCATTGTGCTGGACGGGGATAATATCC 196
.|||||||..|||||||||||.||||..|||||.|||||.||.||..||.
BL02285___cys 147 GTTGTTTGCACAAGGCTACCAGGTCACGGTGCTTGACGGCGACAACGTCA 196
BSNT_02568___ 197 GTCACGGCCTAAATAGGGATCTTGGTTTTTCTGATGAAGACCGAAAAGAA 246
|.|||||.||.||.|.|||.||.||.|||||.|||||||||||.||.|||
BL02285___cys 197 GGCACGGGCTGAACAAGGACCTCGGGTTTTCCGATGAAGACCGGAAGGAA 246
BSNT_02568___ 247 AACATCCGCCGGATCGGAGAGGTGGCGAAGCTTTTTGTTCAGCAGGGAAC 296
|||||||||||||||||.|||||.||||||||.|||||..|.|||||.||
BL02285___cys 247 AACATCCGCCGGATCGGCGAGGTTGCGAAGCTCTTTGTCGAACAGGGGAC 296
BSNT_02568___ 297 CATTGTGATTACTGCTTTTATCTCTCCTTTCCGCGAGGACAGGCAACAGG 346
.||.||.|||||.||.||.||.|||||||| ..||.|.|
BL02285___cys 297 GATCGTCATTACGGCGTTCATTTCTCCTTT------------TAAAGAAG 334
BSNT_02568___ 347 TTCGCG------------AGCTTGTGGAAGCGGGCGAATTTAATGAAGTC 384
.||||| |||||||.||.|..|..||.|||.|.||||||
BL02285___cys 335 ATCGCGGGCTTGTCAGACAGCTTGTCGAGGAAGATGAGTTTCACGAAGTC 384
BSNT_02568___ 385 TACATTAAATGCGACCTTGATATTTGTGAACAAAGAGATCCGAAAGGACT 434
||..|.||||||||..|.|..|..||||||.|..|.||.|||||||| ||
BL02285___cys 385 TATGTGAAATGCGATTTGGCGACGTGTGAAGAGCGCGACCCGAAAGG-CT 433
BSNT_02568___ 435 T-TACAAAAAAGCAAGAAACGGAGAGATTCCGTTCTTTACAGGAATTGAT 483
| |||||||||||.|||||||||||.|||||.||.||.|||||.||.|||
BL02285___cys 434 TGTACAAAAAAGCGAGAAACGGAGAAATTCCATTTTTCACAGGGATCGAT 483
BSNT_02568___ 484 TCACCTTATGAAGAACCGGAAGCTCCAGAGCTCGTTCTTGATTCAGG-AC 532
||.|||||||||||.||.|||.|.||.|||||.|||||||||.|||| .|
BL02285___cys 484 TCGCCTTATGAAGAGCCTGAAACGCCTGAGCTTGTTCTTGATACAGGCGC 533
BSNT_02568___ 533 AGCATGACCGTGAAGCGTGTAAAAATCAGCTGATCGAGTTTGTTAAA--- 579
| |||.||||.||||.|||.|||||.|||||..||.|.|..||.|||
BL02285___cys 534 A-CATAACCGGGAAGAGTGCAAAAACCAGCTCGTCCAATACGTGAAAGAT 582
BSNT_02568___ 580 CAAA--AATTGAGCTGA 594
|||| ||.|.|
BL02285___cys 583 CAAACGAAATAA----- 594
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