Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02566 and BL02283
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence dna-align/BSNT_02566___cysP.1.5803.seq
# -bsequence dna-align/BL02283___cysP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02566___cysP-BL02283___cysP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02566___cysP-BL02283___cysP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02566___cysP
# 2: BL02283___cysP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1132
# Identity: 773/1132 (68.3%)
# Similarity: 773/1132 (68.3%)
# Gaps: 134/1132 (11.8%)
# Score: 2537.0
#
#
#=======================================
BSNT_02566___ 1 ATGGAATTAGCCGCTATTTTATTTAGCTTGTTTTTCGCGATGAATATTGG 50
||||||.|.|||||.||||||||||||.|||||||.|||||||||||.||
BL02283___cys 1 ATGGAACTTGCCGCCATTTTATTTAGCATGTTTTTTGCGATGAATATCGG 50
BSNT_02566___ 51 TGCAAGCGGCGCTGCAGCTTCGATGGGGGTTGCTTACGGCTCCGGAGCCA 100
.||.|||||.||.||.|||||.||||||.|.||.||.||.||.|.|||..
BL02283___cys 51 AGCGAGCGGTGCAGCTGCTTCAATGGGGATCGCCTATGGATCTGAAGCTG 100
BSNT_02566___ 101 TCAAAAAGAAAACCTACGCTT----------TGATCCTATGCGCAGTCGG 140
|||||||||| |.|| ||||| ||.||||..||
BL02283___cys 101 TCAAAAAGAA-------GTTTCACGCCCTCCTGATC---TGTGCAGCGGG 140
BSNT_02566___ 141 TG-TCTTTGCCGGG-GCGGTCATTGGCGGAGGCGAGGTTGTAAAAACAAT 188
.| |||.| |||| ||.|||||.||||||||..|.||.||.|||||.||
BL02283___cys 141 CGTTCTCT--CGGGCGCTGTCATCGGCGGAGGAAACGTCGTGAAAACGAT 188
BSNT_02566___ 189 CAGCTCCGGCATTATTCCTGAGCAGACGATTACAC-TGACGATTGTTTGC 237
|||.||.|||||.|||||.||.|.|..||||.|.| ||| .||.||.|||
BL02283___cys 189 CAGTTCAGGCATCATTCCCGAACGGGTGATTTCGCTTGA-AATCGTCTGC 237
BSNT_02566___ 238 ATCATTATTGGAGCTGCTGCCCTGTCGCTCTTTACTGCTAATCTGCTCGG 287
||.|||||.|||.|.||.||.|||||||||||||..||.|||.|.|||||
BL02283___cys 238 ATTATTATCGGATCAGCGGCGCTGTCGCTCTTTATCGCAAATGTACTCGG 287
BSNT_02566___ 288 CATTCCTTTGTCGACAAGTGAAGTAACAGTCGGCGCGGTTGTCGGCGTGG 337
||||||..|.||||||||||||||.||||||||..|.||||||||.||.|
BL02283___cys 288 CATTCCGCTTTCGACAAGTGAAGTGACAGTCGGATCTGTTGTCGGAGTAG 337
BSNT_02566___ 338 GAGTGGCTTATAAAGTATTGTTTGTGAACAATCTT--CTGATCATTGTGT 385
|.||.||.||..|.||.||||.|||.| |||||| ||..||||.||.|
BL02283___cys 338 GTGTCGCATACCAGGTTTTGTATGTCA--AATCTTTGCTTGTCATCGTCT 385
BSNT_02566___ 386 CATTTTGGGTTTTTGTCCCGCTGTTCGCTTTCGGCTTCACCTATTTCGTA 435
||||||||||..||||.||..|..|||||||.|..||.|| ||||
BL02283___cys 386 CATTTTGGGTCATTGTACCAATCGTCGCTTTTGCATTTAC--ATTT---- 429
BSNT_02566___ 436 TCTAAGCTGTTTCGTTATTTTAAGATTGAAGTAAAATCTTCTAAAAAGCA 485
|| |||.|.| ||||||.|..|||||.|.
BL02283___cys 430 -----GC----------------GATGGCA--AAAATCATGAAAAAAACG 456
BSNT_02566___ 486 A--AAA-----ATCCTCGG------------CGTTGTTTTG--------- 507
| ||| |.|||||| .| ||||||
BL02283___cys 457 ATCAAACGTCCAGCCTCGGGAAAAAAAGCAAAG--GTTTTGGCGGTCATT 504
BSNT_02566___ 508 TTAGTTG----CCGGATTTTTCGAAGCATTCTCTGCCGGCATGAATAACG 553
.|| ||| |.||.|||||.|||||.|||||.||.||||||||.||.|
BL02283___cys 505 CTA-TTGATCACAGGGTTTTTTGAAGCCTTCTCAGCGGGCATGAACAATG 553
BSNT_02566___ 554 TGGCGAATGCTGTTGGCCCGTTAGTAGCTGCCGGTGTGCTTGA-TGTCGG 602
|.||.||.|||||.||.||..|.||.||.||...||| .|||| .|||||
BL02283___cys 554 TCGCAAACGCTGTCGGACCTCTGGTGGCGGCGCATGT-TTTGACAGTCGG 602
BSNT_02566___ 603 AAAAGGAACCTTGTATGGAGGAGCT-TTTGTTGCTCTTGGCGCACTGTTA 651
..|||||||..|.||.||.|| ||| |||||.||.||.|||||.||.|||
BL02283___cys 603 GGAAGGAACGCTCTACGGCGG-GCTGTTTGTCGCGCTGGGCGCCCTTTTA 651
BSNT_02566___ 652 TTAGGCCGGCGTGTGCTAGAAACAAACGGGAAGAAAATTACGAGATTCTC 701
.|.|||.||||.||.||.|||||||||||.||.||.||||||||.||.||
BL02283___cys 652 CTGGGCAGGCGCGTTCTTGAAACAAACGGCAAAAAGATTACGAGGTTTTC 701
BSNT_02566___ 702 CAAAGGGGAAGGCATTCTCTTATCCGGTACAGGAGCCGGACTGGTGATCA 751
.|||||.||.||.||..||.|.|||||.||.||.|||||.||.||.||.|
BL02283___cys 702 AAAAGGAGAGGGAATCATCCTTTCCGGAACGGGGGCCGGGCTTGTCATTA 751
BSNT_02566___ 752 TCAGTTCTGTATTTGGGATGCCGGTGCC-CTTGGCGCAAGTCACGTCATC 800
.||||||..|.||.||..|.|||||.|| ||| |||||||||||.|||||
BL02283___cys 752 CCAGTTCAATTTTCGGTTTACCGGTTCCGCTT-GCGCAAGTCACATCATC 800
BSNT_02566___ 801 GTCTATTATCGGAATAGGCATGGCAAAAAACGGTCCG--AACGTGTTCCA 848
.||||||||.||.||.||.|||||||||||||| || |||||.||.||
BL02283___cys 801 TTCTATTATAGGGATGGGAATGGCAAAAAACGG--CGGCAACGTCTTTCA 848
BSNT_02566___ 849 TAAACAAGTTGTTCAAACGATGCTGAAGGTATGGATCGTATCGCCGTTTT 898
|||||||||.||..|||||||||||||.||||||.||||.||||||||..
BL02283___cys 849 TAAACAAGTGGTCAAAACGATGCTGAAAGTATGGGTCGTCTCGCCGTTCC 898
BSNT_02566___ 899 TATCTTTATCGATTTCTTATCTGCTTGT-ATCCTTGTTTTTAAAAGCAGA 947
|.||.|||....|.||||||.||||.|| |.|||| ||.|||||||.|||
BL02283___cys 899 TTTCATTAAGCCTATCTTATATGCTGGTCAGCCTT-TTATTAAAAGGAGA 947
BSNT_02566___ 948 TTATTATTCGATCTTTATCATGGT---AAGTGTGCTTTTAGCGGCGGGCG 994
.||.|| ||.|| ||||..|.|| |||.||.||..|.||..|.|.||
BL02283___cys 948 CTACTA--CGCTC-TTATTGTTGTCACAAGCGTTCTGCTGGCATCTGTCG 994
BSNT_02566___ 995 GTGCCGTCAGCCTGA----------CAAAGGCCATTCGTAAAGAGAGAC- 1033
|..|..||||||||| |||| |||||| .||
BL02283___cys 995 GAACGATCAGCCTGATGAGAGCGGTCAAA----------AAAGAG-CACA 1033
BSNT_02566___ 1034 GCTCAGTCCACGAACAAGGCGGGGGAATCTGA 1065
||||.|||||.|||||||||||.|||||.|.|
BL02283___cys 1034 GCTCCGTCCATGAACAAGGCGGAGGAATTTAA 1065
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