Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02564 and BL02282

See Amino acid alignment / Visit BSNT_02564 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence dna-align/BSNT_02564___cysH.1.5803.seq
#    -bsequence dna-align/BL02282___cysH.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02564___cysH-BL02282___cysH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02564___cysH-BL02282___cysH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02564___cysH
# 2: BL02282___cysH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 711
# Identity:     536/711 (75.4%)
# Similarity:   536/711 (75.4%)
# Gaps:          18/711 ( 2.5%)
# Score: 1967.0
# 
#
#=======================================

BSNT_02564___      1 ATGTTAACGTATGATAATTGGGAAGAACCAACGATTACATTTCCGGAAGA     50
                     ||.||.||.||....|..|||||.|||||||..||..|.||||.||||||
BL02282___cys      1 ATTTTTACTTACAGCACATGGGAGGAACCAAACATCTCTTTTCAGGAAGA     50

BSNT_02564___     51 CGATCCTTATAAAGGAGCGCTGTCAGTTTTAAAATGGGCATACGGCCATT    100
                     .||..|||||||||||||||||||.||..|.||||||||.|||||.||||
BL02282___cys     51 TGACTCTTATAAAGGAGCGCTGTCCGTCCTGAAATGGGCGTACGGACATT    100

BSNT_02564___    101 ACGGCAATCAACTTGTTTATGCCTGCAGTTTCGGAATTGAGGGAATCGTT    150
                     ||||..||||.||.||.||.||.|||||.||||||||||||||.|||||.
BL02282___cys    101 ACGGGGATCAGCTCGTATACGCGTGCAGCTTCGGAATTGAGGGGATCGTC    150

BSNT_02564___    151 CTGATTGACTTAATTTATAAAGTGAAAAAAGACGCAGAGATTGTGTTTCT    200
                     |||||.||.||.||||||||.|||||||||||.||||..||.||.|||||
BL02282___cys    151 CTGATCGATTTGATTTATAAGGTGAAAAAAGATGCAGTTATCGTTTTTCT    200

BSNT_02564___    201 TGATACAGGACTTCATTTTAAAGAAACCTATGAAACAATTGAACG-AGTG    249
                     |||||||||.|||||||||||||||||.||||||||.||.| ||| .||.
BL02282___cys    201 TGATACAGGGCTTCATTTTAAAGAAACGTATGAAACGATCG-ACGCCGTC    249

BSNT_02564___    250 AAAGAGCGTTATCCGGGTCTTAATATCATCCTGAAAAAACCAGACCTCAC    299
                     |||||.||.|||||.||.|||.|.||.|||.||||||||||.||.||.||
BL02282___cys    250 AAAGAACGATATCCAGGCCTTCAGATTATCATGAAAAAACCGGAGCTTAC    299

BSNT_02564___    300 CCTTGAGGAACAAGCCGAAGAACATGGTGACAAACTGTGGGAAAGA--GA    347
                     |.|.||.||.||.||..|||||.||||.|||.||||.|||  ||||  |.
BL02282___cys    300 CGTCGAAGAGCAGGCGAAAGAATATGGGGACGAACTATGG--AAGACCGC    347

BSNT_02564___    348 GCCGAATCAGTGCTGCTATCTTAGAAAGGTCGTTCCTTTAAGAGAGGCGC    397
                     .||||||...||||||.|..|.||.||||||.|.|||.|..|.|||.|||
BL02282___cys    348 TCCGAATTCCTGCTGCGAAATGAGGAAGGTCATCCCTCTCCGCGAGACGC    397

BSNT_02564___    398 TTTCAGGACATCCAGCCTGGCTTTCCGGCCTGCGTCGTGATCAAGGGCCA    447
                     |||||||..|.||.||.|||||.||.||.|||||.||.||.|||..|||.
BL02282___cys    398 TTTCAGGCTACCCGGCGTGGCTGTCTGGTCTGCGCCGCGAGCAATCGCCC    447

BSNT_02564___    448 AGCCGTGCCAATACGAATTTCTTAAACAAAGATGAAAAATTCAAGTCAGT    497
                     .|.||...|||.||||||||.||.|||||||||||||||||||||||..|
BL02282___cys    448 GGACGGAGCAAAACGAATTTTTTGAACAAAGATGAAAAATTCAAGTCTAT    497

BSNT_02564___    498 AAAAGTTTGCCCGCTTATCCATTGGACTTGGAAAGACATTTGGAGAT---    544
                     .||||||||.|||||.||.||||||||.|||||.||.||||||||||   
BL02282___cys    498 CAAAGTTTGTCCGCTCATTCATTGGACGTGGAAGGATATTTGGAGATATG    547

BSNT_02564___    545 --ACACATCCCGGAATGAACTGGACTACAATCCGCTTCATGACCAAGGAT    592
                       |||.|     |.|.||.||....|||||||||||||||||.|||||.|
BL02282___cys    548 TGACAAA-----GCACGATCTCCCATACAATCCGCTTCATGATCAAGGCT    592

BSNT_02564___    593 ATCCAAGTATTGGATGTGCGCCTTGCACTGCTCCCGCTTTTACAGCAGAG    642
                     ||||.||.||.||.||.||.||.|||||..||||.||.||||||...||.
BL02282___cys    593 ATCCGAGCATCGGCTGCGCTCCGTGCACCTCTCCGGCCTTTACAATGGAT    642

BSNT_02564___    643 GATTTGCGCTCAGGCAGATGGAATGGTAT-GGCGAAAACAGAATGCGGAC    691
                     |||.|.||.||.|||.|.|||||.|| || |||.|||||||||||||||.
BL02282___cys    643 GATCTTCGATCCGGCCGCTGGAACGG-ATCGGCTAAAACAGAATGCGGAT    691

BSNT_02564___    692 TGCATGAATAA    702
                     |.||.||.|||
BL02282___cys    692 TACACGAGTAA    702


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