Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02563 and BL02280
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence dna-align/BSNT_02563___pyrE.1.5803.seq
# -bsequence dna-align/BL02280___pyrE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02563___pyrE-BL02280___pyrE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02563___pyrE-BL02280___pyrE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02563___pyrE
# 2: BL02280___pyrE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 669
# Identity: 453/669 (67.7%)
# Similarity: 453/669 (67.7%)
# Gaps: 75/669 (11.2%)
# Score: 1467.5
#
#
#=======================================
BSNT_02563___ 1 -TTGAAACAAATCATCGCAAAACATCTATTAGACATCCAAGCTGTATTTT 49
|..|||||.| |||.|||||.|||.|||||.|.|||.||||.||.||..
BL02280___pyr 1 ATGAAAACAGA-CATTGCAAACCATTTATTAAAAATCAAAGCGGTTTTCC 49
BSNT_02563___ 50 TACGCCCGAACGAGCCGTTCACATGGGCAAGCGGCATTTTATCACCAATC 99
|.|||||||||||.|||||.||||||||.|||||||||.|.||.||.|||
BL02280___pyr 50 TGCGCCCGAACGAACCGTTTACATGGGCGAGCGGCATTCTGTCGCCCATC 99
BSNT_02563___ 100 TACTGTGACAACCGCCTTACGCTATCTTTCCCAGAGGTCAGAAACGATGT 149
|||||.||||||||..|.|||||.||.|..||.||.||.|||.|.|||.|
BL02280___pyr 100 TACTGCGACAACCGTTTGACGCTTTCATATCCGGAAGTAAGAGATGATAT 149
BSNT_02563___ 150 CGCCTCAGGTATCAGCAAGCTTG----------TCAAAGAGCATTTTCCT 189
|||.||||| ||||| || ||||..|.|||||.
BL02280___pyr 150 CGCTTCAGG---------GCTTGCCGGACTGATTC-AAGACAAATTTCCC 189
BSNT_02563___ 190 GAAGCTGAAATGATTGCGGGAACAGCAACTGCCGGTATTCCTCATGCTGC 239
|.|||.||.|||||.||.||.|||||.||.||.||.||.||||||||.||
BL02280___pyr 190 GGAGCCGAGATGATCGCCGGTACAGCGACCGCGGGAATCCCTCATGCCGC 239
BSNT_02563___ 240 TCTTGCGGCTGACCGTTTGAATCTTCCGATGTGTTATGTGAGGAGCAAGC 289
.|||||.||||||.|..|||..||.||||||||.||.||.||.|||||.|
BL02280___pyr 240 GCTTGCCGCTGACAGGCTGAGCCTGCCGATGTGCTACGTCAGAAGCAAAC 289
BSNT_02563___ 290 CGAAGACACACGGCAAAGGCAATCAGATTGAGGGAGCTG-TGCAAGAAGG 338
|||||.|.|||||||||||.||.||.|||||.||.||.| ||.|| ||||
BL02280___pyr 290 CGAAGGCGCACGGCAAAGGAAACCAAATTGAAGGGGCCGTTGTAA-AAGG 338
BSNT_02563___ 339 GCAAAAAACAGTCGTCATTGAAGACTTAATCTCCACAGGAGGCAGCGTGC 388
.||.|||...||.||.||.|||||.|||||.||.||.|||||.|||||.|
BL02280___pyr 339 ACAGAAAGTCGTTGTGATCGAAGATTTAATTTCAACGGGAGGAAGCGTTC 388
BSNT_02563___ 389 TTGAAGCTTGTGCAGCTTTACA-AGCGGCCGGCTGTGAAGTGCTTGGTGT 437
|||||||....||.||..| || ||.|||.||.|||||||||||.||.||
BL02280___pyr 389 TTGAAGCCGCCGCCGCCCT-CACAGAGGCGGGATGTGAAGTGCTCGGCGT 437
BSNT_02563___ 438 CGTCTCAATCTTTACGTATGGACTTCCTAAAGCGGAGGAAGCCTTC-GCA 486
||.|.|.||.||.||.||.||.|||||.|||||.|..|..|||||| ||.
BL02280___pyr 438 CGCCGCCATTTTCACTTACGGGCTTCCAAAAGCCGCCGCCGCCTTCAGCG 487
BSNT_02563___ 487 AAGGCAGAACTGC----CATACTACTCATTAACTGATTATGATACGCTCA 532
|| |||| || .||||.||.|..|.||||||||.||||||||.|
BL02280___pyr 488 AA-GCAG----GCGTTGAATACCACACGCTGACTGATTACGATACGCTGA 532
BSNT_02563___ 533 CAGAGGTCGCGCTTGAAAAC----GGAAATATTCATTCAA-ATGAT---- 573
|.||||..||||||| | |||.||||| |.|.|| |.|||
BL02280___pyr 533 CCGAGGCTGCGCTTG----CCGGTGGATATATT-ACTGAACAGGATGCCG 577
BSNT_02563___ 574 CTAAAAAAGCTGCAAACATGGAAACAAAATCC------CGAGTCAAAAGA 617
|.||| |||.||..|||||||....|||| |.||||
BL02280___pyr 578 CCAAA----CTGAAAGAATGGAAAGCGGATCCTGAAAGCAAGTC------ 617
BSNT_02563___ 618 TTGGTTTAA---AAAATAA 633
||||.|.|| |
BL02280___pyr 618 TTGGATGAACTGA------ 630
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