Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02562 and BL02279
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:12
# Commandline: needle
# -asequence dna-align/BSNT_02562___pyrF.1.5803.seq
# -bsequence dna-align/BL02279___pyrF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02562___pyrF-BL02279___pyrF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02562___pyrF-BL02279___pyrF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02562___pyrF
# 2: BL02279___pyrF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 754
# Identity: 515/754 (68.3%)
# Similarity: 515/754 (68.3%)
# Gaps: 68/754 ( 9.0%)
# Score: 1695.5
#
#
#=======================================
BSNT_02562___ 1 ATGAAAAACAACCTGCCCATCATCGCGCTTGATTTTGCATCAGCTGAAGA 50
|||||.||.|..|.||||||||||||||||||||||||||||||..|.||
BL02279___pyr 1 ATGAACAATACGCCGCCCATCATCGCGCTTGATTTTGCATCAGCACAGGA 50
BSNT_02562___ 51 AACACTTGCGTTCTTAGCGCCTTTTCAGCAAGAACCGTTATTTGTAAAGG 100
||||..||||||.||.|..|..|||||...||||..|.|.||.||.||||
BL02279___pyr 51 AACATATGCGTTTTTGGACCGGTTTCAAGGAGAAGAGCTGTTCGTTAAGG 100
BSNT_02562___ 101 TTGGAATGGAGCTTTTTTATCAAGAAGG----GCCATCGATCGTGAAACA 146
|.||.|||||||||||||||||.||||| |||||| |.||||
BL02279___pyr 101 TGGGCATGGAGCTTTTTTATCAGGAAGGACCTGCCATC---CTTGAA--- 144
BSNT_02562___ 147 ATTAAAAGAAAGAAACTG--TGA-----GCTG-----TTTT--TAGATCT 182
||.||| .|| |||| |||| |.|||||
BL02279___pyr 145 ------------AATCTGCAGGAGCGCGGCTGCCGCATTTTCCTCGATCT 182
BSNT_02562___ 183 AAAGCTTCATGACATCCCGACTACTGTAAACAAAGCGATGAAGCGCCTTG 232
||||...||.|||||.||.||.||.|||.||||.||||||||..|.||.|
BL02279___pyr 183 AAAGTGCCACGACATTCCAACGACCGTATACAAGGCGATGAAAAGGCTGG 232
BSNT_02562___ 233 CCAGTCTCGGAGT-AGATCTCGTCAATGTTCATGCTGCTGGGGGCAAAAA 281
|..|..|.||.|| || |||.||||||||.||.||.||.||.||.||..|
BL02279___pyr 233 CGGGATTTGGCGTCAG-TCTTGTCAATGTGCACGCAGCAGGCGGAAAGCA 281
BSNT_02562___ 282 AATGATGCAGGCAGCTCTCGAAGGCTTAGAAGAAGGTACGCCGGCTGGAA 331
|||||||.||.|.||.||.||||||.|.||||..||.||.|||||.||..
BL02279___pyr 282 AATGATGGAGTCGGCGCTTGAAGGCCTTGAAGCGGGGACTCCGGCAGGCC 331
BSNT_02562___ 332 AAAAACGTCCGTCACTTATCGCGGTAACCCAGCTGACAAGCACATCTGAA 381
|||||||.||.|||.|.||.||.||.||.||||||||||||||.||...|
BL02279___pyr 332 AAAAACGCCCTTCATTAATTGCCGTGACTCAGCTGACAAGCACGTCCTCA 381
BSNT_02562___ 382 CAAAT-CATGAAAGATGAACTGCTGATCGAAAAGTCTCTGATTGATACGG 430
.|||| |.|.|..| |||.||.|||||.||||.|.|.||..|.|||||.|
BL02279___pyr 382 GAAATGCTTCAGCG-TGAGCTCCTGATTGAAACGCCGCTTCTCGATACAG 430
BSNT_02562___ 431 TTGTGCACTACAGCAAAAAGGCGGAAGAAAGCGGACTGGATGGAGTGGTC 480
||||.|||||||||.....|||.|||||||||||.||.||.||.||.|||
BL02279___pyr 431 TTGTCCACTACAGCCGGCTGGCTGAAGAAAGCGGTCTTGACGGCGTCGTC 480
BSNT_02562___ 481 TGCTCTGTTCATGAAGCAAAAGCCATTTACCAAGCGGTGTCGCCTTCA-- 528
|||||.|||||||||||..||..||||||||..||.|||| ||..|
BL02279___pyr 481 TGCTCCGTTCATGAAGCCGAACACATTTACCGGGCTGTGT---CTGTAGA 527
BSNT_02562___ 529 -TTTCTGACTGTCACTCCGGGGATCAGAATGTCTGAGGAC----GCTGCG 573
||||||||.||.||.||.||.||..|.|||.|.||.||| .|
BL02279___pyr 528 TTTTCTGACCGTGACACCCGGAATTCGCATGGCAGATGACAAAAAC---- 573
BSNT_02562___ 574 AATGACCAAGTCCGCGTAGCGACGCCTGCCATTGCAAGAGAGAAAGGTTC 623
||.|||||.|||||.||.||||||||||.|...|||||.||.|||||...
BL02279___pyr 574 AACGACCAGGTCCGGGTGGCGACGCCTGGCTACGCAAGGGAAAAAGGCGT 623
BSNT_02562___ 624 ATCAGCGATTGTAGTAGGACGCTCGATTACAAAAGCGGAAGACCCGGTAA 673
.||.|||||.||.||.||.||.||||||||..|.||||||||.||.||..
BL02279___pyr 624 GTCGGCGATCGTTGTCGGCCGTTCGATTACCCAGGCGGAAGATCCTGTGT 673
BSNT_02562___ 674 AAGCCTATA-------AGGCTGTCAGACTTGAATGGGAGGGAATCAAATC 716
.||||||.| || |||.|||.||||||||||.|||..|
BL02279___pyr 674 CAGCCTACAGAAGAATAG-------GACATGAGTGGGAGGGAACCAAGGC 716
BSNT_02562___ 717 TTGA 720
.|||
BL02279___pyr 717 ATGA 720
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