Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_02560 and BL02277

See Amino acid alignment / Visit BSNT_02560 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:12
# Commandline: needle
#    -asequence dna-align/BSNT_02560___pyrK.1.5803.seq
#    -bsequence dna-align/BL02277___pyrK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02560___pyrK-BL02277___pyrK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02560___pyrK-BL02277___pyrK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02560___pyrK
# 2: BL02277___pyrK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 814
# Identity:     551/814 (67.7%)
# Similarity:   551/814 (67.7%)
# Gaps:          86/814 (10.6%)
# Score: 1825.0
# 
#
#=======================================

BSNT_02560___      1 ATGAAAAAAGCGTATTTGACAGTATGTTCTAACCAGCAAATTGCAGACCG     50
                     ||||.|||||.||||.|||||||..||||.|||.||...||.||.||.|.
BL02277___pyr      1 ATGAGAAAAGGGTATATGACAGTCCGTTCAAACAAGTGCATCGCGGATCA     50

BSNT_02560___     51 GGTGTTTCAAATGGTTCTGAAAGGGGAGCTTGTCCAAGGGTTTACAAC--     98
                     ..|.|.|||||||||.||..||||||||.|||.|.||  ||||.|..|  
BL02277___pyr     51 TATTTATCAAATGGTGCTTGAAGGGGAGATTGCCGAA--GTTTGCGGCGC     98

BSNT_02560___     99 -CCCTGGACAGTTCCTTCATCTTAAAGTGAGCGAAGCGGTTACGCCTCTT    147
                      ||| ||.|||||||||||..|.||.||....||..|..|.|||||.|||
BL02277___pyr     99 TCCC-GGCCAGTTCCTTCACATCAAGGTCTCAGACTCCCTCACGCCGCTT    147

BSNT_02560___    148 TTGAGAAGGCCGATCAGCATCGCAGACGTCAACTTTGAAAAAAATG----    193
                     |||||..||||||||||||||||.||..|||||      |||...|    
BL02277___pyr    148 TTGAGGCGGCCGATCAGCATCGCTGATATCAAC------AAAGCCGCCCG    191

BSNT_02560___    194 --AAGTCACCATCATTTATCGGGTAGATGGGGAAGGGACAAGACTCTTGT    241
                       |.||.||||||||.|.|||...||||||||||||.||.||||||.|.|
BL02277___pyr    192 GCAGGTGACCATCATCTTTCGCAAAGATGGGGAAGGAACGAGACTCCTTT    241

BSNT_02560___    242 CACTGAAGCAGCAGGGAGAACTTGTGGATGTCCTCGGGCCTTTGGGAAAT    291
                     |..|.||.|||.|.|||||.|...|.|||||.|||||.||..|.||.||.
BL02277___pyr    242 CTTTAAAACAGGAAGGAGATCAGCTCGATGTTCTCGGTCCGCTCGGCAAC    291

BSNT_02560___    292 GGCTTTCCTGTTAATGAA---GTTCAACCCGGAAAGACGGCTTTGCTGGT    338
                     ||.|||||.|   .||||   .||.|||..||.||.||||||.|.||.||
BL02277___pyr    292 GGTTTTCCGG---CTGAATCGCTTGAACAGGGGAAAACGGCTCTTCTCGT    338

BSNT_02560___    339 AGGAGGCGGAGTAGGTGTGCCGCCTCTCCAAGAGCTGTCGAAAC-GCTTG    387
                     .|||||.||..|.|||||.|||||.||..|.||||||...|||| ||   
BL02277___pyr    339 CGGAGGAGGGATCGGTGTTCCGCCGCTTTACGAGCTGAGCAAACAGC---    385

BSNT_02560___    388 ATTGAAAA----AGGGGTAAATGTCATCCACGTTTTAGGATTCCAATCGG    433
                       |||.||    ||||||..|.|..|||||.||.||||||||....||.|
BL02277___pyr    386 --TGACAAACAGAGGGGTGCACGCGATCCATGTGTTAGGATTTGCTTCTG    433

BSNT_02560___    434 CAAAGGATGTTTTTTACGAGGAAGAAT------------GCCGGCAGTAC    471
                     ||||.|||||.||||||||..|.||||            |||||  ||  
BL02277___pyr    434 CAAAAGATGTCTTTTACGAACAGGAATTCAGCCGTTTCGGCCGG--GT--    479

BSNT_02560___    472 GGAGACACGTATGTGGCAACAGCTGACGGAAGCTACGGGGAAACCGGATT    521
                             ||||||||||||.||.|||||.|.|..|||...||..|||||
BL02277___pyr    480 --------GTATGTGGCAACCGCAGACGGCACCCGCGGTTCAAAGGGATT    521

BSNT_02560___    522 TGTCACAGATGTGATTAAACGGAAAAATCTAG-------AGTTTGATATC    564
                     |||.||||||||.|||     |||||  |.||       |||||||    
BL02277___pyr    522 TGTTACAGATGTCATT-----GAAAA--CGAGGGGCTTCAGTTTGA----    560

BSNT_02560___    565 CTCC----TCAGCTGCGGTCCGACACCGATGCTCAAGGCGTTAAAACAGG    610
                     ||.|    |...||||||.|||||.||||||||.||.||.|||||||||.
BL02277___pyr    561 CTGCATAATGGCCTGCGGACCGACGCCGATGCTGAAAGCTTTAAAACAGC    610

BSNT_02560___    611 AATATGCCCATAAAGAAGTATATCTGTCCATGGAGGAACGAATGGGCTGC    660
                     ..|||.|..|||||||.|||||||||||.||||||||.||.|||||.|||
BL02277___pyr    611 GCTATCCGGATAAAGAGGTATATCTGTCAATGGAGGAGCGCATGGGATGC    660

BSNT_02560___    661 GGAATCGGCGCATGCTTCGCGTGTGTGTGCCATACAAACGAAAGTGAGAC    710
                     ||.||||||||.|||||.||.|||||.||||||||..|.|||||.||.||
BL02277___pyr    661 GGGATCGGCGCTTGCTTTGCCTGTGTCTGCCATACGGAAGAAAGCGAAAC    710

BSNT_02560___    711 ATCCTATGTAAAAGTATGTCTCGACGGGCCTGTATTTAAAGCTCAGGAGG    760
                     .||.|||||.||.|||||.||.|||||.|||||.||.|||||.|||||||
BL02277___pyr    711 GTCTTATGTGAAGGTATGCCTTGACGGTCCTGTTTTCAAAGCCCAGGAGG    760

BSNT_02560___    761 TGGCGCTGTAA---    771
                     |   |||||.|   
BL02277___pyr    761 T---GCTGTTATGA    771


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02560 and BL02277

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
