Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02558 and BL02275

See Amino acid alignment / Visit BSNT_02558 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence dna-align/BSNT_02558___pyrAA.1.5803.seq
#    -bsequence dna-align/BL02275___pyrAA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02558___pyrAA-BL02275___pyrAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02558___pyrAA-BL02275___pyrAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02558___pyrAA
# 2: BL02275___pyrAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1121
# Identity:     841/1121 (75.0%)
# Similarity:   841/1121 (75.0%)
# Gaps:          52/1121 ( 4.6%)
# Score: 3096.0
# 
#
#=======================================

BSNT_02558___      1 ATGAAGAGACG-ATTAGTACTGGAAAACGGAGCGGTATTCGAGGGAGAAG     49
                     |||||.||||| .||| ||.|.|||||||||.||.|.||.||.||.||||
BL02275___pyr      1 ATGAAAAGACGTCTTA-TATTAGAAAACGGAACGATTTTTGAAGGGGAAG     49

BSNT_02558___     50 CCTTCGGAAGCTTAGAACACAACATGGGAGAAGTCGTTTTTAATACTGGG     99
                     |.|||||.|||.|.|||.|||.|||||||||||||||.||.||.||.|||
BL02275___pyr     50 CATTCGGCAGCCTGGAAAACACCATGGGAGAAGTCGTCTTCAACACGGGG     99

BSNT_02558___    100 ATGACAGGCTATCAGGAAATTTTATCTGATCCTTCTTACTGCGGACAAAT    149
                     ||||||||||||||||||||..|.||.||.||.||.||||||||||||||
BL02275___pyr    100 ATGACAGGCTATCAGGAAATCCTCTCAGACCCGTCATACTGCGGACAAAT    149

BSNT_02558___    150 CGTAACATTAACATACCCGCTTATCGGAAATTACGGCATTAACCGTGATG    199
                     .||.||..|.||.|||||..|.|||||.||.|||||.||.|||.|.||.|
BL02275___pyr    150 TGTCACCCTGACCTACCCTTTGATCGGGAACTACGGGATCAACAGAGACG    199

BSNT_02558___    200 ATTTTGAATCCATTACCCCTTTTGTCAAAGGGCTGATCATCAAAGAATTA    249
                     |.|||||||||||.|||||||.|||.||||||.|.|||.|.||.||||||
BL02275___pyr    200 ACTTTGAATCCATCACCCCTTATGTAAAAGGGTTTATCGTAAAGGAATTA    249

BSNT_02558___    250 TGTGAGCTGCCTTCCAACTGGCGTTCAGC--ATACACCTTAGACGAGTAT    297
                     |||.|.||.||.||.||||||||.||.||  ||||||  |.||.||.|||
BL02275___pyr    250 TGTCAACTTCCATCAAACTGGCGCTCTGCTTATACAC--TTGATGAATAT    297

BSNT_02558___    298 TTAAAAATGAAAAACATTCCCGGACTC-CAGGGGATTGATACAAGGAAGC    346
                     |||||||||||||||||.||.|||||| || |||||.||.||.||.||||
BL02275___pyr    298 TTAAAAATGAAAAACATCCCGGGACTCTCA-GGGATAGACACGAGAAAGC    346

BSNT_02558___    347 TGACAAGAATGATCCGCACGGCAGGCGCGCTAAAAGGAACATTCGCTTCA    396
                     ||||||||||||||.|.||||||||..||||.|||||...|||.||....
BL02275___pyr    347 TGACAAGAATGATCAGAACGGCAGGTACGCTGAAAGGGGTATTTGCCGGC    396

BSNT_02558___    397 TCTGATGAAGATATCGAAGCAGTGCTG------------AAAAGACTGAA    434
                     .||||.|||||           |||||            ||||| |||||
BL02275___pyr    397 CCTGAAGAAGA-----------TGCTGGGGCTTTGGTTCAAAAG-CTGAA    434

BSNT_02558___    435 CGAAACGGAATTGCCAAGAAATCAAGTATCCCAAGTATCAGCAAAAACAG    484
                     .||||||.|..|.||.|...||||.||...||||||||||.|||||||.|
BL02275___pyr    435 AGAAACGAACCTTCCGACCGATCAGGTCAGCCAAGTATCAACAAAAACGG    484

BSNT_02558___    485 CATATCCGAGCCCGGGAAGAGGCAAACGCATCGTCTTGGTTGACTTCGGC    534
                     |||||||||||||.||.|||||.||.||.|||||..|.||.||.|||||.
BL02275___pyr    485 CATATCCGAGCCCTGGGAGAGGGAAGCGAATCGTGCTCGTCGATTTCGGA    534

BSNT_02558___    535 ATGAAACACGGGATTCTAAGAGAGCTGAACAAACGGAAATGTGACGTCAT    584
                     |||||||||||.||..||||.|||||||||||.||.|||||.||.||.||
BL02275___pyr    535 ATGAAACACGGCATCTTAAGGGAGCTGAACAAGCGCAAATGCGATGTGAT    584

BSNT_02558___    585 CGTTGTGCCTTACAACATTACAGCGGAAGAGGTGCTTCAGCTGAAACCGG    634
                     |||.||.||..||||.||.||.||.|||||.|||.|.||||||||.||.|
BL02275___pyr    585 CGTCGTTCCCCACAATATAACGGCAGAAGAAGTGATGCAGCTGAAGCCTG    634

BSNT_02558___    635 ACGGTATCATGCTTTCTAACGGACCTGGAGACCCGAAGGATGTGCCTGAA    684
                     ||||..|.|||||.||.||||||||.|||||.||.|.|||.||.||.|||
BL02275___pyr    635 ACGGCGTAATGCTGTCAAACGGACCCGGAGATCCAACGGACGTACCGGAA    684

BSNT_02558___    685 GCGATTGAAATGATTAAAGGTGTTCTTGGAAAAGTGCCATTATTCGGAAT    734
                     |||||||..|||||..||....||||.||.||.||.||..|.|||||.||
BL02275___pyr    685 GCGATTGCGATGATCCAAAACATTCTCGGCAAGGTTCCGCTGTTCGGCAT    734

BSNT_02558___    735 ATGTCTCGGCCACCAATTATTCGCGCTGGCGTGCGGGGCGAATACTGAAA    784
                     .|||||||||||.||..|.||.||.||.||.||.||.||.||.||.||.|
BL02275___pyr    735 CTGTCTCGGCCATCAGCTGTTTGCCCTCGCCTGTGGAGCAAAGACGGAGA    784

BSNT_02558___    785 AAATGAAATTCGGCCACAGGGGCTCAAACCACCCGGTAAAAGAGCTGGCT    834
                     |||||||.|||||.|||.|.||.||.|||||.|||||.||||||||.|..
BL02275___pyr    785 AAATGAAGTTCGGACACCGCGGTTCCAACCATCCGGTTAAAGAGCTTGAA    834

BSNT_02558___    835 ACAGGAAAAGTTGCCTTAACATCTCAAAACCATGGATATACAGTTTCGTC    884
                     ||.||.|.|||..|..|.||..||||||||||.||.|||||.||.|||||
BL02275___pyr    835 ACCGGCAGAGTATCAATTACGGCTCAAAACCACGGCTATACCGTATCGTC    884

BSNT_02558___    885 TATCAGT--AAAACA----GAACTGGAAGTGACGCATATCGCAATTAACG    928
                     |    ||  ||||||    |  ||.||||||||.|||.|.||.||.||||
BL02275___pyr    885 T----GTTGAAAACACGCCG--CTTGAAGTGACCCATGTGGCGATAAACG    928

BSNT_02558___    929 ACGATACGATTGAAGGGCTGAAGCATAAA-ACATTG--CCGGCATTTACG    975
                     ||||.||.||.||||||||.||.|||||| ||   |  |||||.||||||
BL02275___pyr    929 ACGACACAATCGAAGGGCTTAAACATAAACAC---GAACCGGCTTTTACG    975

BSNT_02558___    976 GTTCAATATCATCCCGAAGCCTCACCTGGTCCTGAGGATGCCAACCATCT   1025
                     ||||||||.|||||.|||||.|||||.||.||.||.||.||.||||||.|
BL02275___pyr    976 GTTCAATACCATCCTGAAGCTTCACCGGGGCCGGAAGACGCAAACCATTT   1025

BSNT_02558___   1026 ATTTGA-CAGATTCATCGAAATGATCGAAACAACAGAGAAAGAAGGGGAA   1074
                     |||||| || |||..|.||.|||||.|||||.||||||||||||||||||
BL02275___pyr   1026 ATTTGATCA-ATTTTTAGACATGATTGAAACCACAGAGAAAGAAGGGGAA   1074

BSNT_02558___   1075 GCGGTATGCCAAAACGCGTAG   1095
                     ||||||||||.||||||||||
BL02275___pyr   1075 GCGGTATGCCTAAACGCGTAG   1095


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