Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02558 and BL02275
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence dna-align/BSNT_02558___pyrAA.1.5803.seq
# -bsequence dna-align/BL02275___pyrAA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02558___pyrAA-BL02275___pyrAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02558___pyrAA-BL02275___pyrAA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02558___pyrAA
# 2: BL02275___pyrAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1121
# Identity: 841/1121 (75.0%)
# Similarity: 841/1121 (75.0%)
# Gaps: 52/1121 ( 4.6%)
# Score: 3096.0
#
#
#=======================================
BSNT_02558___ 1 ATGAAGAGACG-ATTAGTACTGGAAAACGGAGCGGTATTCGAGGGAGAAG 49
|||||.||||| .||| ||.|.|||||||||.||.|.||.||.||.||||
BL02275___pyr 1 ATGAAAAGACGTCTTA-TATTAGAAAACGGAACGATTTTTGAAGGGGAAG 49
BSNT_02558___ 50 CCTTCGGAAGCTTAGAACACAACATGGGAGAAGTCGTTTTTAATACTGGG 99
|.|||||.|||.|.|||.|||.|||||||||||||||.||.||.||.|||
BL02275___pyr 50 CATTCGGCAGCCTGGAAAACACCATGGGAGAAGTCGTCTTCAACACGGGG 99
BSNT_02558___ 100 ATGACAGGCTATCAGGAAATTTTATCTGATCCTTCTTACTGCGGACAAAT 149
||||||||||||||||||||..|.||.||.||.||.||||||||||||||
BL02275___pyr 100 ATGACAGGCTATCAGGAAATCCTCTCAGACCCGTCATACTGCGGACAAAT 149
BSNT_02558___ 150 CGTAACATTAACATACCCGCTTATCGGAAATTACGGCATTAACCGTGATG 199
.||.||..|.||.|||||..|.|||||.||.|||||.||.|||.|.||.|
BL02275___pyr 150 TGTCACCCTGACCTACCCTTTGATCGGGAACTACGGGATCAACAGAGACG 199
BSNT_02558___ 200 ATTTTGAATCCATTACCCCTTTTGTCAAAGGGCTGATCATCAAAGAATTA 249
|.|||||||||||.|||||||.|||.||||||.|.|||.|.||.||||||
BL02275___pyr 200 ACTTTGAATCCATCACCCCTTATGTAAAAGGGTTTATCGTAAAGGAATTA 249
BSNT_02558___ 250 TGTGAGCTGCCTTCCAACTGGCGTTCAGC--ATACACCTTAGACGAGTAT 297
|||.|.||.||.||.||||||||.||.|| |||||| |.||.||.|||
BL02275___pyr 250 TGTCAACTTCCATCAAACTGGCGCTCTGCTTATACAC--TTGATGAATAT 297
BSNT_02558___ 298 TTAAAAATGAAAAACATTCCCGGACTC-CAGGGGATTGATACAAGGAAGC 346
|||||||||||||||||.||.|||||| || |||||.||.||.||.||||
BL02275___pyr 298 TTAAAAATGAAAAACATCCCGGGACTCTCA-GGGATAGACACGAGAAAGC 346
BSNT_02558___ 347 TGACAAGAATGATCCGCACGGCAGGCGCGCTAAAAGGAACATTCGCTTCA 396
||||||||||||||.|.||||||||..||||.|||||...|||.||....
BL02275___pyr 347 TGACAAGAATGATCAGAACGGCAGGTACGCTGAAAGGGGTATTTGCCGGC 396
BSNT_02558___ 397 TCTGATGAAGATATCGAAGCAGTGCTG------------AAAAGACTGAA 434
.||||.||||| ||||| ||||| |||||
BL02275___pyr 397 CCTGAAGAAGA-----------TGCTGGGGCTTTGGTTCAAAAG-CTGAA 434
BSNT_02558___ 435 CGAAACGGAATTGCCAAGAAATCAAGTATCCCAAGTATCAGCAAAAACAG 484
.||||||.|..|.||.|...||||.||...||||||||||.|||||||.|
BL02275___pyr 435 AGAAACGAACCTTCCGACCGATCAGGTCAGCCAAGTATCAACAAAAACGG 484
BSNT_02558___ 485 CATATCCGAGCCCGGGAAGAGGCAAACGCATCGTCTTGGTTGACTTCGGC 534
|||||||||||||.||.|||||.||.||.|||||..|.||.||.|||||.
BL02275___pyr 485 CATATCCGAGCCCTGGGAGAGGGAAGCGAATCGTGCTCGTCGATTTCGGA 534
BSNT_02558___ 535 ATGAAACACGGGATTCTAAGAGAGCTGAACAAACGGAAATGTGACGTCAT 584
|||||||||||.||..||||.|||||||||||.||.|||||.||.||.||
BL02275___pyr 535 ATGAAACACGGCATCTTAAGGGAGCTGAACAAGCGCAAATGCGATGTGAT 584
BSNT_02558___ 585 CGTTGTGCCTTACAACATTACAGCGGAAGAGGTGCTTCAGCTGAAACCGG 634
|||.||.||..||||.||.||.||.|||||.|||.|.||||||||.||.|
BL02275___pyr 585 CGTCGTTCCCCACAATATAACGGCAGAAGAAGTGATGCAGCTGAAGCCTG 634
BSNT_02558___ 635 ACGGTATCATGCTTTCTAACGGACCTGGAGACCCGAAGGATGTGCCTGAA 684
||||..|.|||||.||.||||||||.|||||.||.|.|||.||.||.|||
BL02275___pyr 635 ACGGCGTAATGCTGTCAAACGGACCCGGAGATCCAACGGACGTACCGGAA 684
BSNT_02558___ 685 GCGATTGAAATGATTAAAGGTGTTCTTGGAAAAGTGCCATTATTCGGAAT 734
|||||||..|||||..||....||||.||.||.||.||..|.|||||.||
BL02275___pyr 685 GCGATTGCGATGATCCAAAACATTCTCGGCAAGGTTCCGCTGTTCGGCAT 734
BSNT_02558___ 735 ATGTCTCGGCCACCAATTATTCGCGCTGGCGTGCGGGGCGAATACTGAAA 784
.|||||||||||.||..|.||.||.||.||.||.||.||.||.||.||.|
BL02275___pyr 735 CTGTCTCGGCCATCAGCTGTTTGCCCTCGCCTGTGGAGCAAAGACGGAGA 784
BSNT_02558___ 785 AAATGAAATTCGGCCACAGGGGCTCAAACCACCCGGTAAAAGAGCTGGCT 834
|||||||.|||||.|||.|.||.||.|||||.|||||.||||||||.|..
BL02275___pyr 785 AAATGAAGTTCGGACACCGCGGTTCCAACCATCCGGTTAAAGAGCTTGAA 834
BSNT_02558___ 835 ACAGGAAAAGTTGCCTTAACATCTCAAAACCATGGATATACAGTTTCGTC 884
||.||.|.|||..|..|.||..||||||||||.||.|||||.||.|||||
BL02275___pyr 835 ACCGGCAGAGTATCAATTACGGCTCAAAACCACGGCTATACCGTATCGTC 884
BSNT_02558___ 885 TATCAGT--AAAACA----GAACTGGAAGTGACGCATATCGCAATTAACG 928
| || |||||| | ||.||||||||.|||.|.||.||.||||
BL02275___pyr 885 T----GTTGAAAACACGCCG--CTTGAAGTGACCCATGTGGCGATAAACG 928
BSNT_02558___ 929 ACGATACGATTGAAGGGCTGAAGCATAAA-ACATTG--CCGGCATTTACG 975
||||.||.||.||||||||.||.|||||| || | |||||.||||||
BL02275___pyr 929 ACGACACAATCGAAGGGCTTAAACATAAACAC---GAACCGGCTTTTACG 975
BSNT_02558___ 976 GTTCAATATCATCCCGAAGCCTCACCTGGTCCTGAGGATGCCAACCATCT 1025
||||||||.|||||.|||||.|||||.||.||.||.||.||.||||||.|
BL02275___pyr 976 GTTCAATACCATCCTGAAGCTTCACCGGGGCCGGAAGACGCAAACCATTT 1025
BSNT_02558___ 1026 ATTTGA-CAGATTCATCGAAATGATCGAAACAACAGAGAAAGAAGGGGAA 1074
|||||| || |||..|.||.|||||.|||||.||||||||||||||||||
BL02275___pyr 1026 ATTTGATCA-ATTTTTAGACATGATTGAAACCACAGAGAAAGAAGGGGAA 1074
BSNT_02558___ 1075 GCGGTATGCCAAAACGCGTAG 1095
||||||||||.||||||||||
BL02275___pyr 1075 GCGGTATGCCTAAACGCGTAG 1095
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