Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02557 and BL02274
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence dna-align/BSNT_02557___pyrC.1.5803.seq
# -bsequence dna-align/BL02274___pyrC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02557___pyrC-BL02274___pyrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02557___pyrC-BL02274___pyrC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02557___pyrC
# 2: BL02274___pyrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1315
# Identity: 982/1315 (74.7%)
# Similarity: 982/1315 (74.7%)
# Gaps: 56/1315 ( 4.3%)
# Score: 3508.0
#
#
#=======================================
BSNT_02557___ 1 ATGTCATATCTCATTAAAAACGGCTGGATACTAAACGAAAATGGTGAAAA 50
|||||.|||.|.|||||||||||||..||.||..|||||||.||.|||||
BL02274___pyr 1 ATGTCTTATTTAATTAAAAACGGCTTCATGCTCGACGAAAAAGGCGAAAA 50
BSNT_02557___ 51 A--ACAGAAGCG-GATATCCGAG-TGACTGGAGAAACCATCACCGCAATC 96
| || |||| ||||||.|.| ||| .||.||..|.||||.||..|||
BL02274___pyr 51 AGTAC---AGCGCGATATCAGGGTTGA-AGGCGATGCAATCAGCGAGATC 96
BSNT_02557___ 97 GGCAAG-CTTGATGCAAC-----GGATAATGAAACGGTAATTGATGCAAA 140
|| ||| |||||.||..| || ||||||||.||.|||||..|
BL02274___pyr 97 GG-AAGCCTTGAGGCCGCTTCGGGG-----GAAACGGTCATCGATGCGGA 140
BSNT_02557___ 141 AGG--TTTGCTCGTTTCACCTGGGTTTGTTGATCTCCACGTGCATTTCAG 188
.|| ||| ||||.||.||.|||.|||||||.||.|||||.||.|||||
BL02274___pyr 141 TGGACTTT--TCGTCTCGCCAGGGCTTGTTGACCTTCACGTTCACTTCAG 188
BSNT_02557___ 189 AGAGCCGGGCGGAGAGAAAAAAGAAACTATTGAAACCGGGGCCAAAGCGG 238
||||||||||||.|||||.||||||||.||.|||||.||.||.|||||.|
BL02274___pyr 189 AGAGCCGGGCGGCGAGAAGAAAGAAACGATCGAAACAGGTGCAAAAGCCG 238
BSNT_02557___ 239 CGGCACGCGGCGGCTATACTACAGTAGCAGCAATGCCGAATACGCGGCCG 288
|.||..|.|||||.|.|||.||.||.||.||||||||||||||.|||||.
BL02274___pyr 239 CAGCGAGAGGCGGGTTTACAACTGTCGCCGCAATGCCGAATACCCGGCCT 288
BSNT_02557___ 289 GTTCCTGATACAAAGGAGCAGATGGAATGGGTGCAAAACAGAATTAAAGA 338
||.||.|||||.||.|||||||||||.|||.|....|||.|.|||.|.||
BL02274___pyr 289 GTCCCCGATACGAAAGAGCAGATGGAGTGGCTTGTCAACCGCATTGACGA 338
BSNT_02557___ 339 AACATCATGCGTCAGAGTTCTTCCATATGCATCCATTACGATCAGACAAA 388
|||..|||..||.|||||.||.||.|||||.||.||.||.|||||.||||
BL02274___pyr 339 AACGGCATCAGTGAGAGTGCTGCCGTATGCTTCAATCACCATCAGGCAAA 388
BSNT_02557___ 389 ----TCGGCGATGAAATGACAAACTTTGAAGCGTTAAAAGAAGCCGGGGC 434
|||| ||||||||..|.||.||||.|.|.|||||.|||||.||
BL02274___pyr 389 CAGGTCGG----GAAATGACCGATTTCGAAGGGCTGAAAGACGCCGGCGC 434
BSNT_02557___ 435 ATTTGCTTTTACAGATGACGGCGTTGGTATACAGACAGCAGGCATGATGT 484
.||.||.|||||.|||||||||||.||..|.||.||.||.||.|||||||
BL02274___pyr 435 GTTCGCGTTTACCGATGACGGCGTCGGCGTTCAAACGGCGGGGATGATGT 484
BSNT_02557___ 485 ATGAAGCGATGAAACGGGCAGCCGCAATTGACAAGGCGATTGTTGCACAT 534
||||||||||||||...||.||..|.|||.|.||.|||||.||.||.||.
BL02274___pyr 485 ATGAAGCGATGAAAAAAGCGGCTTCGATTAATAAAGCGATCGTCGCTCAC 534
BSNT_02557___ 535 TGCGAGGACAACTCCTTAATTTACGGAGGAAGCGTACATGA-GGGGACAT 583
||.||.|||||.||..|.||.|||||.||.||.|||||.|| ||||| ||
BL02274___pyr 535 TGTGAAGACAATTCACTGATCTACGGCGGCAGTGTACACGATGGGGA-AT 583
BSNT_02557___ 584 TCTCCAAAGCGAACGGGCTAAACGGCATACCTTCTGTGTGTGAATCGGTT 633
|..|||||||.|||||..|||||||.||.|||||.|||||.|||.|||||
BL02274___pyr 584 TTGCCAAAGCCAACGGTTTAAACGGGATTCCTTCGGTGTGCGAAGCGGTT 633
BSNT_02557___ 634 CATATTGCCCGCGATGTGCTGCTGGCTGAGGCGGCAAACTGCCATTACCA 683
||.||.||..|.||||||||.||.||.||.||||||..||||||||||||
BL02274___pyr 634 CACATCGCAAGGGATGTGCTTCTTGCCGAAGCGGCAGGCTGCCATTACCA 683
BSNT_02557___ 684 TGTATGCCATATCAGTACAAAAGAATCTGTCAGGGTCGTACGCGATGCGA 733
.||.||.||||||||.||.||.|||||.|||||||||||.|||||.||.|
BL02274___pyr 684 CGTCTGTCATATCAGCACGAAGGAATCGGTCAGGGTCGTCCGCGACGCCA 733
BSNT_02557___ 734 AAAAAGCGGGAATCAGAGTGACAGCAGAAGTGTCGCCGCATCATTTGCTG 783
||||||||||||||.|.|||||.||.||||||.|||||||.|||.||||.
BL02274___pyr 734 AAAAAGCGGGAATCCGCGTGACGGCGGAAGTGACGCCGCACCATCTGCTC 783
BSNT_02557___ 784 CTTTGTGATGAG-GACATCCCGGGGCTGGACACAAACTATAAAATGAATC 832
||||..|| .|| |||||.||.||.||.||.||.||.|||||||||||||
BL02274___pyr 784 CTTTCAGA-CAGCGACATTCCCGGCCTTGATACGAATTATAAAATGAATC 832
BSNT_02557___ 833 CTCCGCTCCGCAGCGCAGAAGACAGAGCTGCTTTAATTGAAGGTCTTTTA 882
|.|||||..|.||..|.||||||||.|..||..|..||||.||.|||..|
BL02274___pyr 833 CGCCGCTTAGAAGTCCGGAAGACAGGGAAGCGCTCCTTGAGGGGCTTAGA 882
BSNT_02557___ 883 GACGGAACAATTGATTTTATTGCAACAGACCATGCACCGCATACGGAAGA 932
||||||||||||||||||||.|||||.||.|||||.||||||||.|||||
BL02274___pyr 883 GACGGAACAATTGATTTTATCGCAACGGATCATGCCCCGCATACAGAAGA 932
BSNT_02557___ 933 AGAGAAAAAC-ACAGA-AATGAAACTGGCGCCATTCGGAATTGTCGGCTT 980
|||||||| ||||| |||||..||.|||||.||.||||||||||||||
BL02274___pyr 933 --AGAAAAACAACAGACAATGAGCCTTGCGCCTTTTGGAATTGTCGGCTT 980
BSNT_02557___ 981 AGAAACAGCATTCCCGCTTCTTTACACACACTTTGTCAAAAATGGCAGCT 1030
.||.||.||.||.|||||.||||||||.|||||||||||||..||||..|
BL02274___pyr 981 GGAGACGGCTTTTCCGCTCCTTTACACGCACTTTGTCAAAACAGGCAAAT 1030
BSNT_02557___ 1031 GGTCGCTGAAGCAGCTGATTGACTACATGACAATCAAGCCATGCGAAGCG 1080
||.|||||||.||||||...||.||.|||||..||||.||.|||||.|||
BL02274___pyr 1031 GGACGCTGAAACAGCTGCACGATTATATGACGGTCAAACCTTGCGAGGCG 1080
BSNT_02557___ 1081 TTCGGTCTCCCATA-TGGAACATTACAAACGGGGCAAGCTGCGGACATTA 1129
|||||.||.||.|| .||||..|| .||.|.||.|...|.|||||.||||
BL02274___pyr 1081 TTCGGGCTGCCGTACGGGAAGCTT-GAAGCCGGACGGTCCGCGGATATTA 1129
BSNT_02557___ 1130 CGTTAATCGATTTAGAAAAAGAAGCAGTTATAGACAAAGAG-ACATTTTT 1178
||.|.||.|||.|.|||...||||.|...||.||.||| || ||.|||.|
BL02274___pyr 1130 CGCTCATTGATCTTGAACGCGAAGAAAAAATTGATAAA-AGCACCTTTCT 1178
BSNT_02557___ 1179 ATCAAAAGGAAAAAATACACCATTCAACGGCATCAGCTGCACCGGCTGGC 1228
.||.|||||.|||||.||.||.||..||||||||||||||..||||||||
BL02274___pyr 1179 TTCTAAAGGGAAAAACACGCCGTTTGACGGCATCAGCTGCTTCGGCTGGC 1228
BSNT_02557___ 1229 CGGTCGCT---ACAATTGCGGCA---GGGAAGCTTGCTTATGAAGAGGGG 1272
|| ||| ||||| |||| ||.||.||.|.|||..||||||||
BL02274___pyr 1229 CG---GCTATGACAAT---GGCAAAGGGAAAACTCGTTTACCAAGAGGGG 1272
BSNT_02557___ 1273 AGACTTGTCAAATGA 1287
||||||||.||||||
BL02274___pyr 1273 AGACTTGTAAAATGA 1287
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