Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02554 and BL02272

See Amino acid alignment / Visit BSNT_02554 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:11
# Commandline: needle
#    -asequence dna-align/BSNT_02554___pyrP.1.5803.seq
#    -bsequence dna-align/BL02272___pyrP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02554___pyrP-BL02272___pyrP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02554___pyrP-BL02272___pyrP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02554___pyrP
# 2: BL02272___pyrP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1421
# Identity:    1005/1421 (70.7%)
# Similarity:  1005/1421 (70.7%)
# Gaps:         142/1421 (10.0%)
# Score: 3694.0
# 
#
#=======================================

BSNT_02554___      1 ATGCCTCTTTGCGTAAAAAAGCAAAGAGGTTTTTTTATACAGTCATTGAG     50
                                                                       
BL02272___pyr      0 --------------------------------------------------      0

BSNT_02554___     51 TCATCCTAAAATGAAAGTCAACAATCAGGGGGAAATCATCATGAGTAAGA    100
                                                             ||||||.|||
BL02272___pyr      1 ----------------------------------------ATGAGTCAGA     10

BSNT_02554___    101 AAAAAGTAAATTTAGGGGTCAGGGATGTCCCGACACCTTTCTCTTGGGTT    150
                     |||||||.||..|.||.|||||.||.||.||.|.||||||...||||.|.
BL02272___pyr     11 AAAAAGTGAACCTTGGTGTCAGAGAAGTACCAAAACCTTTGAATTGGATA     60

BSNT_02554___    151 TCATTCAGCCTTCAGCATTTGTTTGCCATGTTTGGCTCAACCATTTTGGT    200
                     ||.||||||||.||||||.|||||||||||||.||..|.||.||..|.||
BL02272___pyr     61 TCTTTCAGCCTGCAGCATCTGTTTGCCATGTTCGGAGCGACGATCCTTGT    110

BSNT_02554___    201 TCCGAAGCTCGTCGGAATGAGTCCTGCTGTGGCGTTGGTGACAAGCGGCA    250
                     .||||||||.||.||..|.||.||.|..|||||..|..|.||||||||..
BL02272___pyr    111 GCCGAAGCTTGTAGGCTTAAGCCCGGGCGTGGCCCTCATTACAAGCGGGC    160

BSNT_02554___    251 TCGGAACACTGGCGTACCTTCTT-ATTACGAAAGGGCAAATTCCGGCGTA    299
                     |.|||||.||.|||||.| |||| |||||.|||||.||.||.|||||.||
BL02272___pyr    161 TTGGAACGCTTGCGTATC-TCTTGATTACAAAAGGACAGATCCCGGCTTA    209

BSNT_02554___    300 TCTCGGTTCATCCTTCGCCTTTATTTCTCCGATCATTCTGGTAAAAGCGA    349
                     ..|.|||||||||||.||.||||||.|.|||||.||...||.||||||..
BL02272___pyr    210 CTTAGGTTCATCCTTTGCATTTATTGCCCCGATTATCGCGGCAAAAGCCG    259

BSNT_02554___    350 CCGGCGGGCCAGGAGCGGCAATGGTTGGAGCGTTTCTTGCAGGGCTGGTG    399
                     ||||.||.||.||.|||||.|||.|.||.||.|||.|.|||||..|.|..
BL02272___pyr    260 CCGGAGGCCCTGGCGCGGCCATGATCGGCGCATTTATGGCAGGCATCGCC    309

BSNT_02554___    400 TACGGGCTGATTGCCTTATTGATCAGGCAGCTTGGAACAGGA-TGGCTGA    448
                     |||||||||||.|||.|..|.|||..|||||||||||| ||| |||||||
BL02272___pyr    310 TACGGGCTGATCGCCCTTCTCATCCAGCAGCTTGGAAC-GGACTGGCTGA    358

BSNT_02554___    449 TCAAGATTCTCCCGCCTGTAGTCGTAGGGCCTGTTATTATCGTCATCGGG    498
                     |.|.|.||||.||||||||.|||||.||.||.||.||||||||||||||.
BL02272___pyr    359 TGAGGCTTCTGCCGCCTGTTGTCGTCGGTCCGGTCATTATCGTCATCGGA    408

BSNT_02554___    499 CTGGGACTGGCAAGCACTGCGGTAAACATGGCGATGTATGCTGAT-----    543
                     ||.||.|||||||||||.||.||.||.|||||.|||||||..|||     
BL02272___pyr    409 CTCGGGCTGGCAAGCACGGCTGTCAATATGGCCATGTATGAAGATTCGGG    458

BSNT_02554___    544 -CCAAACGCGAGTGAGTTGGTCTACAGCTTAAAGCACTTTAGTGTCGCAG    592
                      .||||    |||  |.|.|||||||||...|||||.|||.|.|||||||
BL02272___pyr    459 AGCAAA----AGT--GCTCGTCTACAGCGCCAAGCATTTTGGCGTCGCAG    502

BSNT_02554___    593 GAGTTACGCTGGCAATTACGATTATTTGTGCGATTTTCTTACGAGGATTT    642
                     ||.|.||.||.||..|.||.||.||.||.|||||||||||..||||||||
BL02272___pyr    503 GATTCACACTCGCGCTCACCATAATCTGCGCGATTTTCTTGAGAGGATTT    552

BSNT_02554___    643 TTAAGCCTGATTCCGGTTCTGATCGGAATCATCGGCGGATACTTGTTCGC    692
                     ||.|||||||||||.||..||||||||||.||||||||||||||||||||
BL02272___pyr    553 TTCAGCCTGATTCCTGTCTTGATCGGAATTATCGGCGGATACTTGTTCGC    602

BSNT_02554___    693 CCTTACTCAAGGGATTGTCAACTTCCAGCCGGTGCTTGACGCGAAATGGT    742
                     |||.||.||.||.||.|||.||||||||..|||.||||||||.|||||||
BL02272___pyr    603 CCTGACCCAGGGAATCGTCGACTTCCAGATGGTTCTTGACGCCAAATGGT    652

BSNT_02554___    743 TTGCAGTGCCTGAATTTATCATTCCGTTCAAAGATTATTCACCGTCAGTT    792
                     ||||.||.||.||.||..|..|||||||....||.|||.|.|||  ||  
BL02272___pyr    653 TTGCTGTTCCGGACTTCGTGCTTCCGTTTGTCGACTATACGCCG--AG--    698

BSNT_02554___    793 ACAC--------TCGGCATCGCAGCCGCAATGGTTCCTGTCGCATTTGTC    834
                      |.|        ||||.||||.|..|||.|||||.||.|||||.||.||.
BL02272___pyr    699 -CGCGGCGGCTGTCGGAATCGGAATCGCCATGGTGCCCGTCGCTTTCGTG    747

BSNT_02554___    835 ACAATGTCAGAGCATATCGGCCACCAAATGGTGCTGAGCAAGGTTGTCGG    884
                     |||||||||||.||||||||.|||||||||||..|.||||||||.|||||
BL02272___pyr    748 ACAATGTCAGAACATATCGGACACCAAATGGTATTAAGCAAGGTCGTCGG    797

BSNT_02554___    885 ACAAGATTTCATTAAAAAGCCAGGTCTTCATCGCTCTATTATGGGTGACA    934
                     .||.|||||.|||||.|||||.||.|||||.|||||.|||.|.||.||||
BL02272___pyr    798 CCAGGATTTTATTAAGAAGCCCGGGCTTCACCGCTCGATTTTCGGCGACA    847

BSNT_02554___    935 GTGTGGCGACAATCCTCGCTTCCCTG-ATCGGCGGTCCGCCGACAACGAC    983
                     |.||.||.||.||.||.||.| |.|| ||||||||.||.|||||||||||
BL02272___pyr    848 GCGTCGCAACGATGCTTGCAT-CATGCATCGGCGGACCCCCGACAACGAC    896

BSNT_02554___    984 ATACGGAGAAAACATTGGCGTACTGGCCATCACAAGAGTATTCAGCGTCT   1033
                     .||||||||||||||.||||||||.|||||||||||||||||||||||.|
BL02272___pyr    897 TTACGGAGAAAACATCGGCGTACTCGCCATCACAAGAGTATTCAGCGTAT    946

BSNT_02554___   1034 TTGTCATCGGAGGAGCGGCAGTGATTGC-TTGTTGCTTCGGCTTTATAGG   1082
                     ||||||||||.||||||||.||.||||| .|| ||||||||.|||||.||
BL02272___pyr    947 TTGTCATCGGCGGAGCGGCTGTCATTGCACTG-TGCTTCGGATTTATCGG    995

BSNT_02554___   1083 CAAAATTTCAGCGCTGATCAGTTCAGTGCCATCAGCGGTCATGGGAGGCG   1132
                     |||||||||.||.||||||||.||.||.||.||.||.|||||||||||||
BL02272___pyr    996 CAAAATTTCGGCCCTGATCAGCTCTGTCCCTTCCGCAGTCATGGGAGGCG   1045

BSNT_02554___   1133 TCTCCTTCCTGCTGTTCGGAATCATTGCTTCAAGCGGCCTGAGAATGCTG   1182
                     |.|||||||||||||||||.|||||.||.||.|||||.|||.|.||||||
BL02272___pyr   1046 TTTCCTTCCTGCTGTTCGGTATCATCGCATCCAGCGGACTGCGCATGCTG   1095

BSNT_02554___   1183 ATTGACAACAAAATTGATTATGAAAACAACAGAAACCTCATTATTACATC   1232
                     ||.||.||.||||||||.|..||||||||..|||||||.||.||..||||
BL02272___pyr   1096 ATCGATAATAAAATTGACTTGGAAAACAAGCGAAACCTGATCATCTCATC   1145

BSNT_02554___   1233 AGTTATCCTTGTCATCGGTGTAGGAGGAGCTTTTATCCAAGTGTCTCAAG   1282
                     .||.||.||.||||||||.||.||.||.||.||||| |||| .|||||  
BL02272___pyr   1146 CGTCATTCTCGTCATCGGAGTGGGCGGCGCATTTAT-CAAG-ATCTCA--   1191

BSNT_02554___   1283 GCGGATTCCAAGTGTCAGGAATGGCGCTTGCCGCAATTGTCGGTGTCATC   1332
                       ||.||..|..|||||.|.|||||||||||.||.||.|||||.||..|.
BL02272___pyr   1192 --GGGTTTGAGCTGTCAAGCATGGCGCTTGCGGCGATCGTCGGAGTGGTT   1239

BSNT_02554___   1333 TTAAACCTGATTCTTCCGCAGGCGAAGGAAGAGCA-GACAGACACATCTG   1381
                     ||||||||..|.||.||..|..|.||||.|||.|| |||.||   || ||
BL02272___pyr   1240 TTAAACCTTGTCCTGCCTGAATCAAAGGGAGATCAGGACGGA---AT-TG   1285

BSNT_02554___   1382 AACAT-------CATATCTAA   1395
                     || ||       |||||.|||
BL02272___pyr   1286 AA-ATAGAAGAGCATATTTAA   1305


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