Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02554 and BL02272
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:11
# Commandline: needle
# -asequence dna-align/BSNT_02554___pyrP.1.5803.seq
# -bsequence dna-align/BL02272___pyrP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02554___pyrP-BL02272___pyrP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02554___pyrP-BL02272___pyrP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02554___pyrP
# 2: BL02272___pyrP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1421
# Identity: 1005/1421 (70.7%)
# Similarity: 1005/1421 (70.7%)
# Gaps: 142/1421 (10.0%)
# Score: 3694.0
#
#
#=======================================
BSNT_02554___ 1 ATGCCTCTTTGCGTAAAAAAGCAAAGAGGTTTTTTTATACAGTCATTGAG 50
BL02272___pyr 0 -------------------------------------------------- 0
BSNT_02554___ 51 TCATCCTAAAATGAAAGTCAACAATCAGGGGGAAATCATCATGAGTAAGA 100
||||||.|||
BL02272___pyr 1 ----------------------------------------ATGAGTCAGA 10
BSNT_02554___ 101 AAAAAGTAAATTTAGGGGTCAGGGATGTCCCGACACCTTTCTCTTGGGTT 150
|||||||.||..|.||.|||||.||.||.||.|.||||||...||||.|.
BL02272___pyr 11 AAAAAGTGAACCTTGGTGTCAGAGAAGTACCAAAACCTTTGAATTGGATA 60
BSNT_02554___ 151 TCATTCAGCCTTCAGCATTTGTTTGCCATGTTTGGCTCAACCATTTTGGT 200
||.||||||||.||||||.|||||||||||||.||..|.||.||..|.||
BL02272___pyr 61 TCTTTCAGCCTGCAGCATCTGTTTGCCATGTTCGGAGCGACGATCCTTGT 110
BSNT_02554___ 201 TCCGAAGCTCGTCGGAATGAGTCCTGCTGTGGCGTTGGTGACAAGCGGCA 250
.||||||||.||.||..|.||.||.|..|||||..|..|.||||||||..
BL02272___pyr 111 GCCGAAGCTTGTAGGCTTAAGCCCGGGCGTGGCCCTCATTACAAGCGGGC 160
BSNT_02554___ 251 TCGGAACACTGGCGTACCTTCTT-ATTACGAAAGGGCAAATTCCGGCGTA 299
|.|||||.||.|||||.| |||| |||||.|||||.||.||.|||||.||
BL02272___pyr 161 TTGGAACGCTTGCGTATC-TCTTGATTACAAAAGGACAGATCCCGGCTTA 209
BSNT_02554___ 300 TCTCGGTTCATCCTTCGCCTTTATTTCTCCGATCATTCTGGTAAAAGCGA 349
..|.|||||||||||.||.||||||.|.|||||.||...||.||||||..
BL02272___pyr 210 CTTAGGTTCATCCTTTGCATTTATTGCCCCGATTATCGCGGCAAAAGCCG 259
BSNT_02554___ 350 CCGGCGGGCCAGGAGCGGCAATGGTTGGAGCGTTTCTTGCAGGGCTGGTG 399
||||.||.||.||.|||||.|||.|.||.||.|||.|.|||||..|.|..
BL02272___pyr 260 CCGGAGGCCCTGGCGCGGCCATGATCGGCGCATTTATGGCAGGCATCGCC 309
BSNT_02554___ 400 TACGGGCTGATTGCCTTATTGATCAGGCAGCTTGGAACAGGA-TGGCTGA 448
|||||||||||.|||.|..|.|||..|||||||||||| ||| |||||||
BL02272___pyr 310 TACGGGCTGATCGCCCTTCTCATCCAGCAGCTTGGAAC-GGACTGGCTGA 358
BSNT_02554___ 449 TCAAGATTCTCCCGCCTGTAGTCGTAGGGCCTGTTATTATCGTCATCGGG 498
|.|.|.||||.||||||||.|||||.||.||.||.||||||||||||||.
BL02272___pyr 359 TGAGGCTTCTGCCGCCTGTTGTCGTCGGTCCGGTCATTATCGTCATCGGA 408
BSNT_02554___ 499 CTGGGACTGGCAAGCACTGCGGTAAACATGGCGATGTATGCTGAT----- 543
||.||.|||||||||||.||.||.||.|||||.|||||||..|||
BL02272___pyr 409 CTCGGGCTGGCAAGCACGGCTGTCAATATGGCCATGTATGAAGATTCGGG 458
BSNT_02554___ 544 -CCAAACGCGAGTGAGTTGGTCTACAGCTTAAAGCACTTTAGTGTCGCAG 592
.|||| ||| |.|.|||||||||...|||||.|||.|.|||||||
BL02272___pyr 459 AGCAAA----AGT--GCTCGTCTACAGCGCCAAGCATTTTGGCGTCGCAG 502
BSNT_02554___ 593 GAGTTACGCTGGCAATTACGATTATTTGTGCGATTTTCTTACGAGGATTT 642
||.|.||.||.||..|.||.||.||.||.|||||||||||..||||||||
BL02272___pyr 503 GATTCACACTCGCGCTCACCATAATCTGCGCGATTTTCTTGAGAGGATTT 552
BSNT_02554___ 643 TTAAGCCTGATTCCGGTTCTGATCGGAATCATCGGCGGATACTTGTTCGC 692
||.|||||||||||.||..||||||||||.||||||||||||||||||||
BL02272___pyr 553 TTCAGCCTGATTCCTGTCTTGATCGGAATTATCGGCGGATACTTGTTCGC 602
BSNT_02554___ 693 CCTTACTCAAGGGATTGTCAACTTCCAGCCGGTGCTTGACGCGAAATGGT 742
|||.||.||.||.||.|||.||||||||..|||.||||||||.|||||||
BL02272___pyr 603 CCTGACCCAGGGAATCGTCGACTTCCAGATGGTTCTTGACGCCAAATGGT 652
BSNT_02554___ 743 TTGCAGTGCCTGAATTTATCATTCCGTTCAAAGATTATTCACCGTCAGTT 792
||||.||.||.||.||..|..|||||||....||.|||.|.||| ||
BL02272___pyr 653 TTGCTGTTCCGGACTTCGTGCTTCCGTTTGTCGACTATACGCCG--AG-- 698
BSNT_02554___ 793 ACAC--------TCGGCATCGCAGCCGCAATGGTTCCTGTCGCATTTGTC 834
|.| ||||.||||.|..|||.|||||.||.|||||.||.||.
BL02272___pyr 699 -CGCGGCGGCTGTCGGAATCGGAATCGCCATGGTGCCCGTCGCTTTCGTG 747
BSNT_02554___ 835 ACAATGTCAGAGCATATCGGCCACCAAATGGTGCTGAGCAAGGTTGTCGG 884
|||||||||||.||||||||.|||||||||||..|.||||||||.|||||
BL02272___pyr 748 ACAATGTCAGAACATATCGGACACCAAATGGTATTAAGCAAGGTCGTCGG 797
BSNT_02554___ 885 ACAAGATTTCATTAAAAAGCCAGGTCTTCATCGCTCTATTATGGGTGACA 934
.||.|||||.|||||.|||||.||.|||||.|||||.|||.|.||.||||
BL02272___pyr 798 CCAGGATTTTATTAAGAAGCCCGGGCTTCACCGCTCGATTTTCGGCGACA 847
BSNT_02554___ 935 GTGTGGCGACAATCCTCGCTTCCCTG-ATCGGCGGTCCGCCGACAACGAC 983
|.||.||.||.||.||.||.| |.|| ||||||||.||.|||||||||||
BL02272___pyr 848 GCGTCGCAACGATGCTTGCAT-CATGCATCGGCGGACCCCCGACAACGAC 896
BSNT_02554___ 984 ATACGGAGAAAACATTGGCGTACTGGCCATCACAAGAGTATTCAGCGTCT 1033
.||||||||||||||.||||||||.|||||||||||||||||||||||.|
BL02272___pyr 897 TTACGGAGAAAACATCGGCGTACTCGCCATCACAAGAGTATTCAGCGTAT 946
BSNT_02554___ 1034 TTGTCATCGGAGGAGCGGCAGTGATTGC-TTGTTGCTTCGGCTTTATAGG 1082
||||||||||.||||||||.||.||||| .|| ||||||||.|||||.||
BL02272___pyr 947 TTGTCATCGGCGGAGCGGCTGTCATTGCACTG-TGCTTCGGATTTATCGG 995
BSNT_02554___ 1083 CAAAATTTCAGCGCTGATCAGTTCAGTGCCATCAGCGGTCATGGGAGGCG 1132
|||||||||.||.||||||||.||.||.||.||.||.|||||||||||||
BL02272___pyr 996 CAAAATTTCGGCCCTGATCAGCTCTGTCCCTTCCGCAGTCATGGGAGGCG 1045
BSNT_02554___ 1133 TCTCCTTCCTGCTGTTCGGAATCATTGCTTCAAGCGGCCTGAGAATGCTG 1182
|.|||||||||||||||||.|||||.||.||.|||||.|||.|.||||||
BL02272___pyr 1046 TTTCCTTCCTGCTGTTCGGTATCATCGCATCCAGCGGACTGCGCATGCTG 1095
BSNT_02554___ 1183 ATTGACAACAAAATTGATTATGAAAACAACAGAAACCTCATTATTACATC 1232
||.||.||.||||||||.|..||||||||..|||||||.||.||..||||
BL02272___pyr 1096 ATCGATAATAAAATTGACTTGGAAAACAAGCGAAACCTGATCATCTCATC 1145
BSNT_02554___ 1233 AGTTATCCTTGTCATCGGTGTAGGAGGAGCTTTTATCCAAGTGTCTCAAG 1282
.||.||.||.||||||||.||.||.||.||.||||| |||| .|||||
BL02272___pyr 1146 CGTCATTCTCGTCATCGGAGTGGGCGGCGCATTTAT-CAAG-ATCTCA-- 1191
BSNT_02554___ 1283 GCGGATTCCAAGTGTCAGGAATGGCGCTTGCCGCAATTGTCGGTGTCATC 1332
||.||..|..|||||.|.|||||||||||.||.||.|||||.||..|.
BL02272___pyr 1192 --GGGTTTGAGCTGTCAAGCATGGCGCTTGCGGCGATCGTCGGAGTGGTT 1239
BSNT_02554___ 1333 TTAAACCTGATTCTTCCGCAGGCGAAGGAAGAGCA-GACAGACACATCTG 1381
||||||||..|.||.||..|..|.||||.|||.|| |||.|| || ||
BL02272___pyr 1240 TTAAACCTTGTCCTGCCTGAATCAAAGGGAGATCAGGACGGA---AT-TG 1285
BSNT_02554___ 1382 AACAT-------CATATCTAA 1395
|| || |||||.|||
BL02272___pyr 1286 AA-ATAGAAGAGCATATTTAA 1305
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