Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02550 and BL02269
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:10
# Commandline: needle
# -asequence dna-align/BSNT_02550___lspA.1.5803.seq
# -bsequence dna-align/BL02269___lspA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02550___lspA-BL02269___lspA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02550___lspA-BL02269___lspA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02550___lspA
# 2: BL02269___lspA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 475
# Identity: 343/475 (72.2%)
# Similarity: 343/475 (72.2%)
# Gaps: 29/475 ( 6.1%)
# Score: 1195.0
#
#
#=======================================
BSNT_02550___ 1 GTGCTGTATTATATGATTGCACTACTTATTATTGCAGCCGATCAATTGAC 50
||||..|||||.||.|||||.||.||.|||||.|....|||||||||.||
BL02269___lsp 1 GTGCCTTATTACATAATTGCGCTGCTCATTATCGGTATCGATCAATTTAC 50
BSNT_02550___ 51 AAAATGGCTAGTTGTTAAGAACATGGA--ACTTGGCCAAAGCATTCCGAT 98
|||||||||.||.||.|..||.||||| || ||..|||||||.||..|
BL02269___lsp 51 AAAATGGCTGGTCGTCAGCAAAATGGAGTAC--GGTGAAAGCATCCCCGT 98
BSNT_02550___ 99 CATTGATCAGGTATTCT---ATATCACCTCCCATCGCAATACGGGTGCTG 145
|||.||| |..|||| |.||.||.||.||..|.|||||.|||||.|
BL02269___lsp 99 CATCGAT---GGCTTCTTTCAGATTACGTCGCACAGGAATACAGGTGCGG 145
BSNT_02550___ 146 CATGGGGGATATTAGCGGGTCAAATGTGGTTTTTCTACCTCATAACAACC 195
|||||||.||.||.||.||.||.|||||||||||.|||.||||.||.||.
BL02269___lsp 146 CATGGGGCATTTTGGCCGGGCAGATGTGGTTTTTTTACATCATTACGACG 195
BSNT_02550___ 196 GCTGTTATTATTGGTATTGTTTATTACATACAGCGTTATACAAAGGGACA 245
|..||.||.||.||.|||||.||.|||||.||.....||.||||.|||||
BL02269___lsp 196 GTGGTGATCATCGGCATTGTATACTACATTCAAAAACATGCAAAAGGACA 245
BSNT_02550___ 246 AAGGTTTCTTGGCGTTGCCCTCGGACTTATGCTTGGCGGTGCCATCGGCA 295
||...|.||.||..|.||.|||||..|.||||||||||||||..||||||
BL02269___lsp 246 AATCCTGCTCGGAATCGCTCTCGGTTTGATGCTTGGCGGTGCTGTCGGCA 295
BSNT_02550___ 296 ACTTTATCGATCGGGCTG-TCAGACAGGAAGTTGTGGATTTTATCCATGT 344
|.||.|||||.||.| || |||||||.||||||||.|||||||||||.||
BL02269___lsp 296 ATTTCATCGACCGCG-TGTTCAGACAAGAAGTTGTCGATTTTATCCACGT 344
BSNT_02550___ 345 TATTATTGTCAAT------TACCCGATATTTAACATCGCGGACTCTTCAT 388
.|..||.|||||| ||.|||||.||.|||||.||.||.||.||.|
BL02269___lsp 345 GACGATCGTCAATTATCACTATCCGATTTTCAACATTGCCGATTCATCTT 394
BSNT_02550___ 389 TATGTGTCGGCGTAATGCTTTTATTTATACAAATGCTGTTGGACAGCGGG 438
|||||.||||.||..||||.||||||||||||||||||||.||| ||
BL02269___lsp 395 TATGTATCGGAGTCCTGCTCTTATTTATACAAATGCTGTTAGAC----GG 440
BSNT_02550___ 439 AAA-AAGAAAAAGGAGC---AATAG 459
||| |||||.||||||| ||
BL02269___lsp 441 AAAGAAGAAGAAGGAGCTGTAA--- 462
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