Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02540 and BL02262
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:09
# Commandline: needle
# -asequence dna-align/BSNT_02540___ylmF.1.5803.seq
# -bsequence dna-align/BL02262___ylmF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02540___ylmF-BL02262___ylmF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02540___ylmF-BL02262___ylmF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02540___ylmF
# 2: BL02262___ylmF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 461
# Identity: 356/461 (77.2%)
# Similarity: 356/461 (77.2%)
# Gaps: 13/461 ( 2.8%)
# Score: 1358.0
#
#
#=======================================
BSNT_02540___ 1 ATGAGTATGAAGAATAAACTGAAAAACTTTTTCTCAATGGAAGATGAAGA 50
||||||.||||.||.|||.|.|||||||||||.||..||||.|||||.||
BL02262___ylm 1 ATGAGTTTGAAAAACAAATTTAAAAACTTTTTTTCCTTGGATGATGAGGA 50
BSNT_02540___ 51 ATACGAATATGAATATATTG----AGACAGAGCGGGAATCTCATGAGGAG 96
|||||||||.||.||||||| ||||||.|.||.|||| |.|||.|||
BL02262___ylm 51 ATACGAATACGAGTATATTGAAACAGACAGGGAGGAAATC-CCTGAAGAG 99
BSNT_02540___ 97 CATGAGCAAAAAGA-AAAGCCGGCTTATACGGGGAATAAACCTTCGGGCA 145
|||||...|||||| |.|.|||.||...| |..||||.|..|.||.|
BL02262___ylm 100 CATGAATCAAAAGACAGAACCGCCTACCA----GTCTAAAGCGGCTGGGA 145
BSNT_02540___ 146 AACAGAATGTAGTGAGCTTGCAAAGTGTTCAGAAATCCTCTAAAGTGGTG 195
|.||||||||.||.||.||||||||.|||||||||||.||||||||.|||
BL02262___ylm 146 AGCAGAATGTCGTAAGTTTGCAAAGCGTTCAGAAATCTTCTAAAGTAGTG 195
BSNT_02540___ 196 TTGAGTGAGCCGCGCGTTTATGCGGAGGCGCAGGAAATAGCCGACCATTT 245
||.||||||||.||.||.||.|||||.||.||||||||.||.||||||.|
BL02262___ylm 196 TTAAGTGAGCCTCGGGTGTACGCGGAAGCCCAGGAAATCGCAGACCATAT 245
BSNT_02540___ 246 GAAGAACCGGCGGGCAGTTGTCGTCAATCTTCAGCGGATACAGCATGACC 295
.||.|||||.||.||.||.|||||.||.||.|||||.||.|||||.||.|
BL02262___ylm 246 CAAAAACCGACGCGCCGTCGTCGTGAACCTGCAGCGCATCCAGCACGATC 295
BSNT_02540___ 296 AGGCGAAGCGGATTGTTGACTTTTTAAGCGGAACCGTTTATGCCATCGGC 345
|||||||..|.||.|||||.||.||.||||||||.||.|||||..|||||
BL02262___ylm 296 AGGCGAAAAGAATCGTTGATTTCTTGAGCGGAACTGTATATGCTCTCGGC 345
BSNT_02540___ 346 GGCGATATTCAAAGAATCGGCTCAGATATTTTCCTCTGCACGCCTGACAA 395
|||||||||||..|.|||||..|.||.||.||..|.|||||||||||.||
BL02262___ylm 346 GGCGATATTCAGCGGATCGGAGCGGACATCTTTTTATGCACGCCTGAGAA 395
BSNT_02540___ 396 CGTAGATGTATCAGGCACAATTTCTGAGCTCATATCTGAAGACGAACATC 445
|||.|||||.||.|||||.|||||.||||||||| |||||.|||||||
BL02262___ylm 396 CGTCGATGTTTCCGGCACGATTTCCGAGCTCATA---GAAGAAGAACATC 442
BSNT_02540___ 446 AGAGGTGGTAA 456
|||||||||||
BL02262___ylm 443 AGAGGTGGTAA 453
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