Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02523 and BL02249
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence dna-align/BSNT_02523___sbp.1.5803.seq
# -bsequence dna-align/BL02249___sbp.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02523___sbp-BL02249___sbp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02523___sbp-BL02249___sbp.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02523___sbp
# 2: BL02249___sbp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 370
# Identity: 260/370 (70.3%)
# Similarity: 260/370 (70.3%)
# Gaps: 20/370 ( 5.4%)
# Score: 928.5
#
#
#=======================================
BSNT_02523___ 1 ATGTGGCTGCCCGTGTTGGGACTGGTGCTCGGAATAGCGATTGGACTAAT 50
||||||||.||.||.||.||.||..||||||||||..|.||.||..|.|.
BL02249___sbp 1 ATGTGGCTTCCGGTTTTAGGGCTTTTGCTCGGAATTACAATCGGGTTCAG 50
BSNT_02523___ 51 GACAAACTTAACGATACCGAGTGAATACTCAAACTATTTATCGCTTGCGG 100
.||.||.||.||.||.|||..|||.||||||||.|||||.||.||.|||.
BL02249___sbp 51 CACGAATTTCACCATTCCGGATGAGTACTCAAATTATTTGTCCCTGGCGA 100
BSNT_02523___ 101 TGCTTGCCGCACTTGATACATTAATCGGCGGAATCAGGGCGCATTTACAA 150
|.||.||..|.||.|||||.||.|||||.|||||.|||||.|||||..||
BL02249___sbp 101 TTCTGGCATCGCTCGATACGTTGATCGGGGGAATAAGGGCCCATTTGGAA 150
BSNT_02523___ 151 GGTACATATGATGAAATGGTATTTGTTTCCGGTTTCTTTTTTAATATTAT 200
.||..|||.||||||.|.||.|||||..|.||.||.||.||.||||||||
BL02249___sbp 151 AGTGTATACGATGAACTAGTTTTTGTGACAGGCTTTTTCTTCAATATTAT 200
BSNT_02523___ 201 ATTGGCAATAAGTTTAGCTTTTCTGGGAGTCCATCTTGGTGTAGACTTGT 250
..|.||.||||||||.|||||||||||.||.|||||||||||||||||||
BL02249___sbp 201 TCTTGCCATAAGTTTGGCTTTTCTGGGCGTTCATCTTGGTGTAGACTTGT 250
BSNT_02523___ 251 ATTTAGCAGGTATATTCGCATTTGGAGTCAGATTATTTCAGAATATAGCC 300
||||||..|||||.||.||||||||.||.||..|.|||||.||.||.||.
BL02249___sbp 251 ATTTAGTCGGTATGTTTGCATTTGGCGTGAGGCTTTTTCAAAACATCGCG 300
BSNT_02523___ 301 GTTATCAGAAGAAATCTACTAACAAAGTGGACTCTTTCTA----AAAAAA 346
||.||||||||||..||.||..|.||.|||||....||.| ||||||
BL02249___sbp 301 GTCATCAGAAGAATACTGCTCGCCAAATGGACGGCATCGAGGAGAAAAAA 350
BSNT_02523___ 347 ATAAAAAAAATGTGATATAA 366
.|||
BL02249___sbp 351 TTAA---------------- 354
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