Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02522 and BL02248
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence dna-align/BSNT_02522___ylxX.1.5803.seq
# -bsequence dna-align/BL02248___ylxX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02522___ylxX-BL02248___ylxX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02522___ylxX-BL02248___ylxX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02522___ylxX
# 2: BL02248___ylxX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity: 461/768 (60.0%)
# Similarity: 461/768 (60.0%)
# Gaps: 141/768 (18.4%)
# Score: 1371.0
#
#
#=======================================
BSNT_02522___ 1 ---------------------------------------ATGGTCATCTT 11
|||.||||.||
BL02248___ylx 1 TTGAAGAAAAATAATCGTTTCATCAGTTTGAGCATCTTGATGCTCATTTT 50
BSNT_02522___ 12 CGGCCTGATGATATCTGTTCAGTTTAATTCGTTAAAGCACCCCAAAGTCC 61
||||.|.|||.|.||.||.|||||.||||||.|.|||...||.||.||||
BL02248___ylx 51 CGGCATTATGCTGTCCGTGCAGTTCAATTCGCTGAAGGCGCCGAAGGTCC 100
BSNT_02522___ 62 GGGATACAAGAGATATGTGGGATATTAGGGAAGAGCTGACATCAGAGCAG 111
|.|||||..|.||.||.|||||..|.|||||.||..||| || |
BL02248___ylx 101 GCGATACGCGGGACATTTGGGACCTCAGGGAGGACTTGA------AG--G 142
BSNT_02522___ 112 AAGAAGCAGGAAAAGCTGCTGGCT---------GAAATAAACAAATATGA 152
||||| |||.||||.|.|||.|.| |||||..||||.|||||
BL02248___ylx 143 AAGAA-CAGAAAAAACAGCTTGATCTGATCAGCGAAATTGACAAGTATGA 191
BSNT_02522___ 153 CAAATTGCTGAATAGCTATTCGCAAACGAAAGAAATGACAA-AAGAAACC 201
.|||.||||||| |.||.|| ||..|| ||| ||||||||
BL02248___ylx 192 AAAAATGCTGAA--------CACATAC---AGTCAT--CAAGAAGAAACC 228
BSNT_02522___ 202 ------------GCGCTAAATAATAC-CTTGCAATCCTTAAAAAAAACA- 237
|||.|.|||.|.|| ||| |||..||| |||||||||
BL02248___ylx 229 TCGCGGACAAAAGCGTTGAATGAAACGCTT-CAAAACTT-AAAAAAACAG 276
BSNT_02522___ 238 GCCGGCATGACCGATATAACAGGTAGCGGAATTGTCATTACGATTTCCCC 287
||||||.|.||.|||.|.|||||.|.||||||..||||.||.|||||.|.
BL02248___ylx 277 GCCGGCTTCACAGATGTCACAGGGAACGGAATCATCATCACCATTTCTCA 326
BSNT_02522___ 288 GCTTTTTTCTGAAAGCTTAACAGGAGAGCCGATCGAAAATCCGCCTCCGG 337
|||.||.||.|||...||.|||||.||..||||..|||||||.|||||.|
BL02248___ylx 327 GCTCTTCTCGGAAGAATTGACAGGGGAATCGATTCAAAATCCCCCTCCCG 376
BSNT_02522___ 338 ATTTGCTGAAAAAGCTGATAAATGAACTCAACTCCTACGGTGCAGAGCAT 387
|..|.||||||||||||||.||||||||.||....||.|..||.||..|.
BL02248___ylx 377 ACCTTCTGAAAAAGCTGATTAATGAACTGAATATGTATGAAGCGGAAGAA 426
BSNT_02522___ 388 ATCTCGATTAATGAGCGAAGAGTTGTGAATCA-TACAGTCATCAGAGATA 436
||.||.||.||.||..||||.|||||.|| || .||.||.|||.|.||||
BL02248___ylx 427 ATATCCATCAACGACAGAAGGGTTGTCAA-CACGACGGTGATCCGCGATA 475
BSNT_02522___ 437 TAAACGGCACTACAAAAATAGACGGATACGCCCTT--GACGATTATCCTT 484
|.|||||.||.||.|||||||||||.|| .|||| |||.|.|||||..
BL02248___ylx 476 TCAACGGAACAACCAAAATAGACGGTTA--TCCTTTGGACAACTATCCGA 523
BSNT_02522___ 485 TAACAGTAAAAGTGCTTGCCAAAGATCCGGACATGTTACACAGCAGAGTG 534
||||.||||||||..|.|.||||.|..|.||.|...||.|.|||.||.||
BL02248___ylx 524 TAACGGTAAAAGTCATCGGCAAAAACGCCGATAAACTATATAGCCGAATG 573
BSNT_02522___ 535 AAGGGGTCAGGCCTTGAGGATCTTTTTGCATCTGAAAAT-----TTAGC- 578
||.|..|||..|||..|||||||.||.||....|||||| ||.||
BL02248___ylx 574 AATGCTTCATCCCTGCAGGATCTGTTCGCGGGAGAAAATCTGGATTTGCA 623
BSNT_02522___ 579 -ATTAAAAGCCGGTAAATCTGAAAGCAAACTAAT---ATTAAAAGCATAT 624
||.|||||.| ||||| ||||.||| |.|.|||||.||.
BL02248___ylx 624 AATCAAAAGGC-------CTGAA---AAACAAATCAAAATCAAAGCTTAC 663
BSNT_02522___ 625 GACAGACCACTGGACGTACAACAGC-----TGAAACTGCTTAAAGACTGA 669
||..|..||.||.|.|| .|| ||||||.|||..||.|.|.|
BL02248___ylx 664 GAAGGTTCAATGCAAGT-----TGCGCCATTGAAACCGCTCGAAAAATCA 708
BSNT_02522___ 669 ------------------ 669
BL02248___ylx 709 AAAGGAGAGAATTCCTAA 726
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