Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02521 and BL02246
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence dna-align/BSNT_02521___ylxW.1.5803.seq
# -bsequence dna-align/BL02246___ylxW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02521___ylxW-BL02246___ylxW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02521___ylxW-BL02246___ylxW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02521___ylxW
# 2: BL02246___ylxW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 745
# Identity: 477/745 (64.0%)
# Similarity: 477/745 (64.0%)
# Gaps: 101/745 (13.6%)
# Score: 1353.0
#
#
#=======================================
BSNT_02521___ 1 TTG-AGGGGCAAATCAGCAGTCCTTCTTTC-CTTGATTATGCTTATCGCA 48
||| ||.||||.| |||||..|||||| ||.| ..||||||.||...
BL02246___ylx 1 TTGAAGAGGCACA----CAGTCAATCTTTCACTCG-CCATGCTTGTCCTC 45
BSNT_02521___ 49 GGTTTTTTGATTTCATTTTCTTTTCAAATGACAAAAGAAAACAA----CA 94
||.||..||.|.||.||.||.|.||||.|..|.|..|||||||| ||
BL02246___ylx 46 GGCTTCCTGCTGTCTTTCTCCTATCAATTCGCCAGGGAAAACAAAGACCA 95
BSNT_02521___ 95 -----AAAGCGCGGCTGAGACGGAAGAGTGGAAAAAAGAATATGCGCTGA 139
||| ||| |.|||.|.||||||.|.||||||.|.|||.
BL02246___ylx 96 TGAAGAAA------CTG---CTGAAAATTGGAAAGAGGAATATTCCCTGC 136
BSNT_02521___ 140 GAGATGAACTGCTGA---AACAAGAGAAAG-AAAATAAGAAGTTTGAAAA 185
| .||.|.||||| ..||||| |||| |||||||||||.|.|||.|
BL02246___ylx 137 G---CGACCGGCTGATTTCCCAAGA-AAAGCAAAATAAGAAGCTGGAACA 182
BSNT_02521___ 186 AGAATTATATCAAA----AGC-----------AAAACAAAGTCCGCCAGG 220
.||..|.|| |||| ||| ||||||.||.| ||
BL02246___ylx 183 GGAGCTTTA-CAAAAAACAGCAGGAAGTACAGAAAACAGAGAC-----GG 226
BSNT_02521___ 221 C--GGAAAATAAGCTGAAGAAAGAGAAGTCGGAATACTATAATGTCCTCG 268
| .||||| |.||||.|.|| ||.|||||.|||.|..|.|
BL02246___ylx 227 CTTTGAAAA-------AGGAAAAAAAA----GAGTACTACAATATTGTGG 265
BSNT_02521___ 269 AAGATACAGAAAAATACAGGATGTATATTGGGGAAGTCGGTGTGCAGGGA 318
|||||...||.|..|||||.||||...|.||||||.||||.||.|||||.
BL02246___ylx 266 AAGATGTTGAGAGGTACAGAATGTTCGTCGGGGAAATCGGCGTTCAGGGC 315
BSNT_02521___ 319 GAAGGCGTTGAGGTGACATTGGAAGATGCGTCATACATACCGGAAGGGGA 368
|||||..|..|.|||||..||.||||.||.||.|||||.||.||.||.||
BL02246___ylx 316 GAAGGGATCAAAGTGACGCTGAAAGACGCTTCGTACATCCCAGAGGGTGA 365
BSNT_02521___ 369 GAATGTGAATAGTTACATCGTTCACGAAAGCCATATCTTCCAAGTAGTAA 418
||||||.||.|..||.|||||.||.||||||||.||.||||...|..|.|
BL02246___ylx 366 GAATGTCAACAACTATATCGTCCATGAAAGCCACATTTTCCGCCTGCTCA 415
BSNT_02521___ 419 ACGAACTGTATATCTCAGGAGCGGCAGC--TGTCGCCGTTAATGGACAGC 466
|.||.||||..||.||.||.|||||.|| ||||| .|.||.|||||||
BL02246___ylx 416 ATGAGCTGTGGATTTCCGGGGCGGCCGCGGTGTCG--ATCAACGGACAGC 463
BSNT_02521___ 467 GTTTGACGCATGATTCGT--ATATCAAATGCAATGGTCCTGTGGTAACGG 514
|..||||.|||.||||.| ||||| .|||||.||.|||||..|.||||
BL02246___ylx 464 GCGTGACACATCATTCCTACATATC--GTGCAACGGCCCTGTCATCACGG 511
BSNT_02521___ 515 TAGACGGGGTGCAGCATCCCGCTCCGTTTACGGTA--TCCGCTATTGGAG 562
|.|||||....|||.||||.||.|||||| |.|| ||.||.||.||.|
BL02246___ylx 512 TTGACGGCAACCAGTATCCGGCGCCGTTT--GTTATTTCGGCCATCGGGG 559
BSNT_02521___ 563 ATCCAGATGTCCTGCTGCCCTCGTTAAATATCGCTGGAGGCCTAATTGAT 612
||.|.|||||.|||.||||..||.|.||.||.||.|||||.||..|.||.
BL02246___ylx 560 ATGCGGATGTGCTGATGCCGGCGCTGAACATTGCAGGAGGGCTTGTGGAC 609
BSNT_02521___ 613 CAGCTGTCAATG----GATCATATTTCTGTGTCGGCA--GAAA---AAGA 653
|||||| .| ||||||||||| .|||.||| |||| ||||
BL02246___ylx 610 CAGCTG----AGCCGCGATCATATTTC--AGTCAGCATCGAAAAACAAGA 653
BSNT_02521___ 654 GAAAAACGTACAAATGAAACCGATTCTGAA--AACGAAGGAATGA 696
.||.|.|| |.|||.|.||..||.|||| ||.| |||||||
BL02246___ylx 654 TAATATCG---AGATGGAGCCCCTTTTGAAGCAAGG--GGAATGA 693
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