Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02519 and BL02245

See Amino acid alignment / Visit BSNT_02519 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence dna-align/BSNT_02519___divIB.1.5803.seq
#    -bsequence dna-align/BL02245___divIB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02519___divIB-BL02245___divIB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02519___divIB-BL02245___divIB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02519___divIB
# 2: BL02245___divIB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 845
# Identity:     565/845 (66.9%)
# Similarity:   565/845 (66.9%)
# Gaps:         109/845 (12.9%)
# Score: 1782.5
# 
#
#=======================================

BSNT_02519___      1 ATGAACCCGGGTCAAGACCGAGAAAAAATCGTTAACATTGAAGAGCGGAT     50
                     .||||.||.|||...||...|||||||.|.||.||.||.|||||.||.||
BL02245___div      1 GTGAAACCCGGTATTGATAAAGAAAAAGTAGTGAATATAGAAGAACGTAT     50

BSNT_02519___     51 CCCTAAAATTAAAGAGCAGAGGAAACAAAAGGCAAACCGCCGTCTCATTT    100
                     .||.|||||||||||.|||.|.||.|||||||||||||||||.||.||..
BL02245___div     51 TCCCAAAATTAAAGAACAGCGAAAGCAAAAGGCAAACCGCCGGCTGATCA    100

BSNT_02519___    101 CATTTATTATGCTCTTTTTTATTATGGTGCTGATCATTGTGTACCTGCAA    150
                     |.||||||.||||||||||.|..|||.||||||||||..|.||||||||.
BL02245___div    101 CCTTTATTCTGCTCTTTTTCACGATGATGCTGATCATCATTTACCTGCAG    150

BSNT_02519___    151 ACACCAATCAGTAAAGTATC----------AACAATCTCTGTTACAGGGA    190
                     ||.||.|||||.|||||.||          |.|||          |||.|
BL02245___div    151 ACGCCGATCAGCAAAGTCTCGAAGGTAGAGATCAA----------AGGAA    190

BSNT_02519___    191 ATGAAAATGTATCAAAAAAGGAA---ATTATCGACCTTTC--CGAT--AT    233
                     |..||||.||.||   |||||||   ||.||...||||||  |.||  ||
BL02245___div    191 ACAAAAACGTTTC---AAAGGAACAGATCATTTCCCTTTCTTCAATCCAT    237

BSNT_02519___    234 TAACAGCGGAGATACTGAGTTTTGGAGTTTGGACAAGCAAAAA---ACAG    280
                     .||    |||.|.||.||.|||||||||.||..||||||||||   .|||
BL02245___div    238 AAA----GGACAGACGGAATTTTGGAGTCTGAGCAAGCAAAAAGCCGCAG    283

BSNT_02519___    281 AAAAGAAGATTC-AGCAAAATAAATTAGTGAAAAAAGCGGAGA----TCA    325
                     ||||||    || ||||.||||||.|..|.||||||||.||.|    |.|
BL02245___div    284 AAAAGA----TCGAGCAGAATAAACTGATCAAAAAAGCCGAAATTTCTAA    329

BSNT_02519___    326 GCAAATCGCTGCCTAATAAAATCAACATTGCAATCGAAGAATAT-AAAGC    374
                     .|||    |||||.||.||||||..|||..|.||||||||.||| |||||
BL02245___div    330 ACAA----CTGCCCAACAAAATCGCCATCTCCATCGAAGAGTATAAAAGC    375

BSNT_02519___    375 GATTGCTTATTTAGAAAAAGACGATGTGTACTATGAAGTGCTTGAAAACG    424
                      |||||.|.|||..|||||.|..||||||||||....|||||||||||||
BL02245___div    376 -ATTGCGTTTTTGCAAAAACATAATGTGTACTACTCCGTGCTTGAAAACG    424

BSNT_02519___    425 GCTCAGTTCTGCCAAACGAAGTAACGCCGGATGATGCCGGACCGA-TTTT    473
                     ||.|.||.||.||..|.||.||.||||||..|||...||||||.| ..||
BL02245___div    425 GCACGGTGCTTCCTGAAGAGGTGACGCCGACTGACATCGGACCAACCCTT    474

BSNT_02519___    474 AGTGAATTGGACAAACGCGAAGAAGCGGTC--TCAAATGGCCAAGCAGCT    521
                     |.|.|.|.|||..||..|||| ||||  ||  |||||||||.||.|||||
BL02245___div    475 AATAACTGGGAGGAAGACGAA-AAGC--TCGTTCAAATGGCAAAACAGCT    521

BSNT_02519___    522 ------------CGATGCGTTGTCAAAGTCGTTAAAACAGTCGATTTCAG    559
                                 ||||.|           |||.|||| |.||||||||.|
BL02245___div    522 GAACAAGCTTTCCGATTC-----------CGTGAAAA-AATCGATTTCCG    559

BSNT_02519___    560 AAATTTATTATACGCCTGTAAAAATGGATGAAAACCGT------ATTAAG    603
                     |.||..|.||||||||| .||||||     .|||||.|      ||.||.
BL02245___div    560 AGATCAACTATACGCCT-CAAAAAT-----CAAACCCTTGGCTGATCAAA    603

BSNT_02519___    604 TTGTACATGAACGACGGTTATGTTGTTACGGCATCTATTAAAACGTTTG-    652
                     .||||.|||||||||||.|||.|.||.||.||.||..|.||||||||.| 
BL02245___div    604 CTGTATATGAACGACGGCTATATCGTGACAGCTTCGCTGAAAACGTTCGG    653

BSNT_02519___    653 -CAGACCGAATGAAGACGTATCCTTCTATCATCTCACAGCTAAGCAGCAA    701
                      ||||  .||||||.|..|||||..|.|||.|...|.||||  ||.|.||
BL02245___div    654 ACAGA--AAATGAACAGCTATCCGGCGATCGTAAAAGAGCT--GCCGAAA    699

BSNT_02519___    702 --TAAAAAAGGAATCATTCATTTAGAAGTTGCCACCTATTTTGAAGAGTT    749
                       ..|||||||.||.||.|||.|.|||||.||.||.||||||||| ..|.
BL02245___div    700 GGGGAAAAAGGCATTATCCATATGGAAGTCGCGACTTATTTTGAA-CCTC    748

BSNT_02519___    750 TGGAAAAAAC-GAT-AAAGCTGCTAAAAAGGAAGATGAAAATTGA    792
                     ||.||||||| ||| |||||    |||||||.|||.|.|||||||
BL02245___div    749 TGAAAAAAACGGATGAAAGC----AAAAAGGGAGACGGAAATTGA    789


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02519 and BL02245

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
