Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02514 and BL02242

See Amino acid alignment / Visit BSNT_02514 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence dna-align/BSNT_02514___spoVE.1.5803.seq
#    -bsequence dna-align/BL02242___spoVE.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02514___spoVE-BL02242___spoVE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02514___spoVE-BL02242___spoVE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02514___spoVE
# 2: BL02242___spoVE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1125
# Identity:     864/1125 (76.8%)
# Similarity:   864/1125 (76.8%)
# Gaps:          36/1125 ( 3.2%)
# Score: 3341.5
# 
#
#=======================================

BSNT_02514___      1 GTGTCGATTGCTTTGACTACTAAAAAAACATCGCCTGATTTGTTATTGGT     50
                                 |||...||.||||||||.||.||.|||||.||..||||
BL02242___spo      1 ------------TTGCAAACAAAAAAAACGTCACCGGATTTTTTGCTGGT     38

BSNT_02514___     51 CATCATTACGTTATTATTATTAACAATCGGATTAATTATGGTGTACAGTG    100
                     .|||||||||.||||..|.||||||||||||.|.||||||||.|||||.|
BL02242___spo     39 TATCATTACGCTATTGCTTTTAACAATCGGACTGATTATGGTATACAGCG     88

BSNT_02514___    101 CGAGTGCGGTATGGGCGGATTATAAATTTGACGACTCATTCTTTTTCGCG    150
                     |.|||||.|||||||||..|||.||||..||||||||.||.||.||.|||
BL02242___spo     89 CCAGTGCAGTATGGGCGACTTACAAATACGACGACTCCTTTTTCTTTGCG    138

BSNT_02514___    151 AAACGGCAGCTTTTGTTTGCGGGAATCGGCGTCATTGCTATGTTTTTTAT    200
                     ||||||||||||||||||||.||.|||||.|||||.||.||||||||.||
BL02242___spo    139 AAACGGCAGCTTTTGTTTGCCGGCATCGGGGTCATCGCCATGTTTTTCAT    188

BSNT_02514___    201 CATGAATGTCGATTATTGGACTTGGAGGAC--ATGGTCCAAATTGCTGAT    248
                     ||||||.|||||.||.|||||.||||||||  |||  |.|||.|.|||||
BL02242___spo    189 CATGAACGTCGACTACTGGACGTGGAGGACTTATG--CGAAAATACTGAT    236

BSNT_02514___    249 GGTTATCTGCTTTTTCCTTCTG---------GTGCTTGTTTTGATACCGG    289
                     ..||.|.||   ||||.|||||         ||.||.|||      ||.|
BL02242___spo    237 CATTGTATG---TTTCTTTCTGCTCATCATCGTCCTGGTT------CCCG    277

BSNT_02514___    290 GCGTCGGAATGGTGCGGAACGGTTCAAGAAGCTGGATCGGAGTCGGAGCA    339
                     |..||||.||||..||||||||.||.||.|||||||||||||||||.||.
BL02242___spo    278 GGATCGGCATGGAACGGAACGGGTCGAGGAGCTGGATCGGAGTCGGCGCT    327

BSNT_02514___    340 TTCAGCATACAGCCTTCAGAGTTTATGAAGCTTGCGATGATTGCATTCCT    389
                     ||||||||.|||||.||.|||||||||||.||.||||||||.|||||..|
BL02242___spo    328 TTCAGCATTCAGCCGTCCGAGTTTATGAAACTCGCGATGATCGCATTTTT    377

BSNT_02514___    390 TGCTAAATTTCTCTCTGAAAAACAAAAAAACATCACATCGTTCAGACGGG    439
                     .||.||.|||.|.||||||||.|||||.||.||.||.|||||.|||...|
BL02242___spo    378 GGCCAAGTTTTTATCTGAAAAGCAAAAGAATATTACGTCGTTTAGAAAAG    427

BSNT_02514___    440 GGTTCGTCCCTGCACTTGGCATCGTGTTTTCAGCATTTTTGATTATCATG    489
                     |.||.||.||.||.||.|||||.||.||||||||.|||.||||.||||||
BL02242___spo    428 GCTTTGTGCCGGCGCTGGGCATTGTCTTTTCAGCTTTTCTGATCATCATG    477

BSNT_02514___    490 -TGCCAGCCTGACCTCGGAACGGGGACAGTAATGGTCGGAACTTGTATTG    538
                      || |||||||||||||||||.||.||.||.||||||||.||.||.||..
BL02242___spo    478 ATG-CAGCCTGACCTCGGAACAGGAACCGTGATGGTCGGCACATGCATCA    526

BSNT_02514___    539 TCATGATTTTTGTAGCCGGCGCGCGGATCGCCCATTTCGTCTTTCTCGGA    588
                     |.|||||.|||||.||.||.|||.|.||..|.||.|||||.||||||||.
BL02242___spo    527 TTATGATCTTTGTCGCGGGGGCGAGAATTTCGCACTTCGTTTTTCTCGGC    576

BSNT_02514___    589 CTGATCGGCCTCAGCGGATTTGTCGGGCTCGTACTATCAGCTCCATATCG    638
                     ||||||||.||.|||||.||||||||.||.||.||.||.||.||.||.||
BL02242___spo    577 CTGATCGGACTGAGCGGTTTTGTCGGCCTTGTGCTGTCGGCGCCGTACCG    626

BSNT_02514___    639 GATTAAGCGGATTACCTCATACTTAAATCCATGGGAAGACCCGCTCGGAA    688
                     |||.||..||||.||.||||||||.||.||.|||||.|||||..|.||||
BL02242___spo    627 GATCAAAAGGATCACTTCATACTTGAACCCTTGGGAGGACCCTTTAGGAA    676

BSNT_02514___    689 GCGGATTTCAGATCATTCAATCGCTTTATGCAGTGGGGCCCGGCGGGTTG    738
                     ||||.|||||.||||||||.||.||||||||.|||||||||||||||.||
BL02242___spo    677 GCGGCTTTCAAATCATTCAGTCTCTTTATGCGGTGGGGCCCGGCGGGCTG    726

BSNT_02514___    739 TTTGGAATGGGGCTCGGACAAAGCAGACAGAAATTCTTTTATCTGCCTGA    788
                     ||.||..|.||.|||||.||.|||||.||.||.||.||.|||||||||||
BL02242___spo    727 TTCGGCCTCGGCCTCGGCCAGAGCAGGCAAAAGTTTTTCTATCTGCCTGA    776

BSNT_02514___    789 GCCGCAAACAGACTTTATTTTCGCCATCTTGTCAGAGGAGCTGGGCTTTA    838
                     ||||||.|||||.||||||||.||.||.||.|||||||||||.|||||||
BL02242___spo    777 GCCGCAGACAGATTTTATTTTTGCGATTTTATCAGAGGAGCTCGGCTTTA    826

BSNT_02514___    839 TCGGGGGAACACTTATTTTGCTCCTCTTCAGCGTCCTGCTGTGGAGAGGA    888
                     ||||.|||.|.||.|||.|..|.|||||||||||.||..|.||||||||.
BL02242___spo    827 TCGGCGGATCGCTGATTCTTTTGCTCTTCAGCGTTCTATTATGGAGAGGC    876

BSNT_02514___    889 ATCAGAATTGCGCTTGGTGCCCCTGATCTGTACGGAAGCTTTGTCGCAGT    938
                     ||||||||.|||||.|||||.||.|||.|.|||||.||.||||||||.||
BL02242___spo    877 ATCAGAATCGCGCTCGGTGCGCCCGATTTATACGGCAGTTTTGTCGCCGT    926

BSNT_02514___    939 CGGTATTATTTCAATGATTGCCATTCAAGTCATGATCAATATCGGCGTAG    988
                     |||..|.|||||.|||||.||.|||||.||.||||||||||||||.||.|
BL02242___spo    927 CGGCGTCATTTCGATGATAGCGATTCAGGTTATGATCAATATCGGAGTCG    976

BSNT_02514___    989 TCACGGGCCTGATTCCTGTAACAGGCATCACGCTCCCGTTTCTGAGCTAC   1038
                     |.||.||..||||||||||.||||||||.|||||.||||||.|.|||||.
BL02242___spo    977 TGACTGGTTTGATTCCTGTTACAGGCATTACGCTTCCGTTTTTAAGCTAT   1026

BSNT_02514___   1039 GGAGGCTCTTCATTGACTCTAATGCTGATGGCAGTTGGTGTGCTGCTGAA   1088
                     ||.||.||.|||.||||..|.|||||.|||||.||.||.|||||||||||
BL02242___spo   1027 GGCGGTTCATCACTGACCTTGATGCTCATGGCGGTCGGCGTGCTGCTGAA   1076

BSNT_02514___   1089 TGTAAGCCGCTACTCGAGGTATTAA   1113
                     |||.|||.|.||.||.||.||.||.
BL02242___spo   1077 TGTCAGCAGGTATTCTAGATACTAG   1101


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