Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02514 and BL02242
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:07
# Commandline: needle
# -asequence dna-align/BSNT_02514___spoVE.1.5803.seq
# -bsequence dna-align/BL02242___spoVE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02514___spoVE-BL02242___spoVE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02514___spoVE-BL02242___spoVE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02514___spoVE
# 2: BL02242___spoVE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1125
# Identity: 864/1125 (76.8%)
# Similarity: 864/1125 (76.8%)
# Gaps: 36/1125 ( 3.2%)
# Score: 3341.5
#
#
#=======================================
BSNT_02514___ 1 GTGTCGATTGCTTTGACTACTAAAAAAACATCGCCTGATTTGTTATTGGT 50
|||...||.||||||||.||.||.|||||.||..||||
BL02242___spo 1 ------------TTGCAAACAAAAAAAACGTCACCGGATTTTTTGCTGGT 38
BSNT_02514___ 51 CATCATTACGTTATTATTATTAACAATCGGATTAATTATGGTGTACAGTG 100
.|||||||||.||||..|.||||||||||||.|.||||||||.|||||.|
BL02242___spo 39 TATCATTACGCTATTGCTTTTAACAATCGGACTGATTATGGTATACAGCG 88
BSNT_02514___ 101 CGAGTGCGGTATGGGCGGATTATAAATTTGACGACTCATTCTTTTTCGCG 150
|.|||||.|||||||||..|||.||||..||||||||.||.||.||.|||
BL02242___spo 89 CCAGTGCAGTATGGGCGACTTACAAATACGACGACTCCTTTTTCTTTGCG 138
BSNT_02514___ 151 AAACGGCAGCTTTTGTTTGCGGGAATCGGCGTCATTGCTATGTTTTTTAT 200
||||||||||||||||||||.||.|||||.|||||.||.||||||||.||
BL02242___spo 139 AAACGGCAGCTTTTGTTTGCCGGCATCGGGGTCATCGCCATGTTTTTCAT 188
BSNT_02514___ 201 CATGAATGTCGATTATTGGACTTGGAGGAC--ATGGTCCAAATTGCTGAT 248
||||||.|||||.||.|||||.|||||||| ||| |.|||.|.|||||
BL02242___spo 189 CATGAACGTCGACTACTGGACGTGGAGGACTTATG--CGAAAATACTGAT 236
BSNT_02514___ 249 GGTTATCTGCTTTTTCCTTCTG---------GTGCTTGTTTTGATACCGG 289
..||.|.|| ||||.||||| ||.||.||| ||.|
BL02242___spo 237 CATTGTATG---TTTCTTTCTGCTCATCATCGTCCTGGTT------CCCG 277
BSNT_02514___ 290 GCGTCGGAATGGTGCGGAACGGTTCAAGAAGCTGGATCGGAGTCGGAGCA 339
|..||||.||||..||||||||.||.||.|||||||||||||||||.||.
BL02242___spo 278 GGATCGGCATGGAACGGAACGGGTCGAGGAGCTGGATCGGAGTCGGCGCT 327
BSNT_02514___ 340 TTCAGCATACAGCCTTCAGAGTTTATGAAGCTTGCGATGATTGCATTCCT 389
||||||||.|||||.||.|||||||||||.||.||||||||.|||||..|
BL02242___spo 328 TTCAGCATTCAGCCGTCCGAGTTTATGAAACTCGCGATGATCGCATTTTT 377
BSNT_02514___ 390 TGCTAAATTTCTCTCTGAAAAACAAAAAAACATCACATCGTTCAGACGGG 439
.||.||.|||.|.||||||||.|||||.||.||.||.|||||.|||...|
BL02242___spo 378 GGCCAAGTTTTTATCTGAAAAGCAAAAGAATATTACGTCGTTTAGAAAAG 427
BSNT_02514___ 440 GGTTCGTCCCTGCACTTGGCATCGTGTTTTCAGCATTTTTGATTATCATG 489
|.||.||.||.||.||.|||||.||.||||||||.|||.||||.||||||
BL02242___spo 428 GCTTTGTGCCGGCGCTGGGCATTGTCTTTTCAGCTTTTCTGATCATCATG 477
BSNT_02514___ 490 -TGCCAGCCTGACCTCGGAACGGGGACAGTAATGGTCGGAACTTGTATTG 538
|| |||||||||||||||||.||.||.||.||||||||.||.||.||..
BL02242___spo 478 ATG-CAGCCTGACCTCGGAACAGGAACCGTGATGGTCGGCACATGCATCA 526
BSNT_02514___ 539 TCATGATTTTTGTAGCCGGCGCGCGGATCGCCCATTTCGTCTTTCTCGGA 588
|.|||||.|||||.||.||.|||.|.||..|.||.|||||.||||||||.
BL02242___spo 527 TTATGATCTTTGTCGCGGGGGCGAGAATTTCGCACTTCGTTTTTCTCGGC 576
BSNT_02514___ 589 CTGATCGGCCTCAGCGGATTTGTCGGGCTCGTACTATCAGCTCCATATCG 638
||||||||.||.|||||.||||||||.||.||.||.||.||.||.||.||
BL02242___spo 577 CTGATCGGACTGAGCGGTTTTGTCGGCCTTGTGCTGTCGGCGCCGTACCG 626
BSNT_02514___ 639 GATTAAGCGGATTACCTCATACTTAAATCCATGGGAAGACCCGCTCGGAA 688
|||.||..||||.||.||||||||.||.||.|||||.|||||..|.||||
BL02242___spo 627 GATCAAAAGGATCACTTCATACTTGAACCCTTGGGAGGACCCTTTAGGAA 676
BSNT_02514___ 689 GCGGATTTCAGATCATTCAATCGCTTTATGCAGTGGGGCCCGGCGGGTTG 738
||||.|||||.||||||||.||.||||||||.|||||||||||||||.||
BL02242___spo 677 GCGGCTTTCAAATCATTCAGTCTCTTTATGCGGTGGGGCCCGGCGGGCTG 726
BSNT_02514___ 739 TTTGGAATGGGGCTCGGACAAAGCAGACAGAAATTCTTTTATCTGCCTGA 788
||.||..|.||.|||||.||.|||||.||.||.||.||.|||||||||||
BL02242___spo 727 TTCGGCCTCGGCCTCGGCCAGAGCAGGCAAAAGTTTTTCTATCTGCCTGA 776
BSNT_02514___ 789 GCCGCAAACAGACTTTATTTTCGCCATCTTGTCAGAGGAGCTGGGCTTTA 838
||||||.|||||.||||||||.||.||.||.|||||||||||.|||||||
BL02242___spo 777 GCCGCAGACAGATTTTATTTTTGCGATTTTATCAGAGGAGCTCGGCTTTA 826
BSNT_02514___ 839 TCGGGGGAACACTTATTTTGCTCCTCTTCAGCGTCCTGCTGTGGAGAGGA 888
||||.|||.|.||.|||.|..|.|||||||||||.||..|.||||||||.
BL02242___spo 827 TCGGCGGATCGCTGATTCTTTTGCTCTTCAGCGTTCTATTATGGAGAGGC 876
BSNT_02514___ 889 ATCAGAATTGCGCTTGGTGCCCCTGATCTGTACGGAAGCTTTGTCGCAGT 938
||||||||.|||||.|||||.||.|||.|.|||||.||.||||||||.||
BL02242___spo 877 ATCAGAATCGCGCTCGGTGCGCCCGATTTATACGGCAGTTTTGTCGCCGT 926
BSNT_02514___ 939 CGGTATTATTTCAATGATTGCCATTCAAGTCATGATCAATATCGGCGTAG 988
|||..|.|||||.|||||.||.|||||.||.||||||||||||||.||.|
BL02242___spo 927 CGGCGTCATTTCGATGATAGCGATTCAGGTTATGATCAATATCGGAGTCG 976
BSNT_02514___ 989 TCACGGGCCTGATTCCTGTAACAGGCATCACGCTCCCGTTTCTGAGCTAC 1038
|.||.||..||||||||||.||||||||.|||||.||||||.|.|||||.
BL02242___spo 977 TGACTGGTTTGATTCCTGTTACAGGCATTACGCTTCCGTTTTTAAGCTAT 1026
BSNT_02514___ 1039 GGAGGCTCTTCATTGACTCTAATGCTGATGGCAGTTGGTGTGCTGCTGAA 1088
||.||.||.|||.||||..|.|||||.|||||.||.||.|||||||||||
BL02242___spo 1027 GGCGGTTCATCACTGACCTTGATGCTCATGGCGGTCGGCGTGCTGCTGAA 1076
BSNT_02514___ 1089 TGTAAGCCGCTACTCGAGGTATTAA 1113
|||.|||.|.||.||.||.||.||.
BL02242___spo 1077 TGTCAGCAGGTATTCTAGATACTAG 1101
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