Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02513 and BL02241
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence dna-align/BSNT_02513___murD.1.5803.seq
# -bsequence dna-align/BL02241___murD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02513___murD-BL02241___murD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02513___murD-BL02241___murD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02513___murD
# 2: BL02241___murD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1391
# Identity: 1001/1391 (72.0%)
# Similarity: 1001/1391 (72.0%)
# Gaps: 70/1391 ( 5.0%)
# Score: 3471.5
#
#
#=======================================
BSNT_02513___ 1 GTGGAAAATGATCAATTTTTACAGAAACAGCATTTTTTAATCCTTGGGCT 50
|||||.|.|.|..|.||.||.||.||.||..||.|..|..|.||.|||||
BL02241___mur 1 GTGGATACTCAAGATTTATTGCAAAATCAAAATGTGCTCGTACTGGGGCT 50
BSNT_02513___ 51 TGCGAAAAGCGGATATGCGGCGGCCTCCATTCTTCATGAAAAAGGCATTT 100
.|||||||||||||||||.||.||.||.||.||||||||.||||||.|..
BL02241___mur 51 GGCGAAAAGCGGATATGCTGCCGCTTCGATCCTTCATGAGAAAGGCGTAA 100
BSNT_02513___ 101 ATGTTGCAGTCAATGACCAAAAGCCTTTTGAAGAAAATGAACCGGCACAA 150
|.||||..||.||||||||...|||||||||.|||||||||||.||.|
BL02241___mur 101 AGGTTGTCGTGAATGACCAGCTGCCTTTTGAGGAAAATGAACCTGCGC-- 148
BSNT_02513___ 151 AAGCTTTCT----GAAAAAGGAATCGAAGTTGTTTGCGGAGAGCATCC-- 194
|..|||| ||||||||..|.|||||.||.|||||....|||||
BL02241___mur 149 --GGATTCTCGCGGAAAAAGGGGTGGAAGTCGTCTGCGGCTCTCATCCGA 196
BSNT_02513___ 195 ----AGTTTCTCTGTTCGATCAGCATCAAATC-ACGATTCTGATCAAAAA 239
| |||||.||||..|||...||| || ||||||||.|||||
BL02241___mur 197 CGGAA------CTGTTTGATCTTCATTCGATCGAC-ATTCTGATTAAAAA 239
BSNT_02513___ 240 CCCGGGAATTCCTTATGAAAATATTATGGTTCAGGAAGCGGAGAAAAGAG 289
.|||||.||.|..||||||||..|.|||||..|.||||||..|||..|.|
BL02241___mur 240 TCCGGGCATCCGCTATGAAAACGTGATGGTCGAAGAAGCGCTGAAGCGGG 289
BSNT_02513___ 290 GTATTCCGGTTTGGACGGAAATTGAGCTCGCTTACTACCTGACCA---GC 336
||||.|||||.||||||||..||||.|||||.||..|.|||| || ||
BL02241___mur 290 GTATCCCGGTCTGGACGGAGGTTGAACTCGCCTATCATCTGA-CAGATGC 338
BSNT_02513___ 337 GCCAAGTTTATCGGGATTACCGGATCGAACGGTAAAACGACCACGACAAC 386
.|| |||.|||||.||||||||.||.|||||.||.|||||.||||||||
BL02241___mur 339 TCC--GTTCATCGGCATTACCGGTTCAAACGGAAAGACGACAACGACAAC 386
BSNT_02513___ 387 GCTAATTTACGAAATGCTCAAAGCTGACTCGCAAAAAGCACTGATTGCCG 436
|||..||||.||||||||.||.||.||.|||.|||||||.||..||||.|
BL02241___mur 387 GCTTGTTTATGAAATGCTGAAGGCCGATTCGAAAAAAGCGCTCGTTGCTG 436
BSNT_02513___ 437 GAAACATCGGCACAGTCGCAAGTGAGGTTGCCTATCATGCTGATGGAGAT 486
|.||.|||||.||.|..|||||.||.||.|||.||||.||....|||||.
BL02241___mur 437 GGAATATCGGTACGGCGGCAAGCGAAGTGGCCAATCAGGCCAGCGGAGAC 486
BSNT_02513___ 487 GAATGGATCGTTACCGAACTGTCTTCGTTTCAGCTGATGGGAACACACGC 536
|||||||||||.||.||.|||||....||||||||.|||||.||..|...
BL02241___mur 487 GAATGGATCGTGACAGAGCTGTCGAGTTTTCAGCTCATGGGGACTTATCA 536
BSNT_02513___ 537 TTTCAGACCGGAAATCAGCCTG----ATT-TTAAATGTATTTGACGCCCA 581
.|||||||||.|.|| || ||| |||||.||||||||.|||||
BL02241___mur 537 ATTCAGACCGAAGAT-----TGGATTATTATTAAACGTATTTGATGCCCA 581
BSNT_02513___ 582 TCTGGATTATCACCATACGCGCGAAAACTATGAAAAAGCGAAACAGAAAG 631
|||.||||||||||||.|||||.||||.|||||....||.||||||.|.|
BL02241___mur 582 TCTCGATTATCACCATTCGCGCAAAAATTATGAGCTTGCCAAACAGCAGG 631
BSNT_02513___ 632 TGTACCTTCATCAGACTGCTTCAGATAAAGCCATTGTCAACCAGGATGAT 681
|.||.|...||||..|.|...||||....|||.|||||||...|||.|||
BL02241___mur 632 TCTATCGAAATCAATCGGAAACAGACGTTGCCGTTGTCAATTTGGACGAT 681
BSNT_02513___ 682 GAAACCGTCGTGCGTCTTGCTGAAGCCGG-----AAAAGCCGAAATCGTC 726
||.||.|||||.||.||.||.|| | ||||||.||.|..||.
BL02241___mur 682 GAGACAGTCGTCCGGCTCGCGGA-----GTGTTCAAAAGCGGAGAAGGTG 726
BSNT_02513___ 727 CCATTTTCAGTCAGCAAAACGCTTGAACAGGGCGCATATGTAAAAGACAG 776
...|||||.|||.||...||.|||||.|..||.||.|..||.||||||.|
BL02241___mur 727 TATTTTTCGGTCCGCCGGACACTTGAGCGCGGAGCGTGCGTGAAAGACGG 776
BSNT_02513___ 777 TATGATTATGTTTAACGGCGAAGCCATTC-TTCCTCTGGAAGAGGTTGTG 825
....||.||||||||||||||| ||..|| |.||.||||||||.||.||.
BL02241___mur 777 CGCAATCATGTTTAACGGCGAA-CCGGTCATGCCGCTGGAAGACGTCGTT 825
BSNT_02513___ 826 CTGCCCGGTGCTCATAACCTGGAGAACATTTTAGCAG--CTATTGCAGTT 873
.||||.||.|..||.||..|||||||||||||.||.| || ||||| |.
BL02241___mur 826 TTGCCGGGAGAGCACAATTTGGAGAACATTTTGGCCGCCCT-TTGCA-TC 873
BSNT_02513___ 874 GTGAAAACGGCAGGAGCATCCAATGAGGCGGTTAAAAAGGTGCTGACAAG 923
||.|||||.|||||.|..|||.|.|.|||.||....|||||||||||.||
BL02241___mur 874 GTTAAAACAGCAGGCGTTTCCGACGCGGCCGTCCGTAAGGTGCTGACGAG 923
BSNT_02513___ 924 CTTTACTGGTGTGAAGCACCGCCTCCAATATGTCACAACTGTGAATGGCC 973
||||||.|||||.||||||.|..|.|||||.|||.|.||..|.||
BL02241___mur 924 CTTTACAGGTGTTAAGCACAGGATGCAATACGTCGCGACGATCAA----- 968
BSNT_02513___ 974 GCAAA-------TTTTATAACGACAGTAAAGCAACAAACATTCTGGCGAC 1016
||| |||||.||.|||||.|||||.|||||||||||.|||||
BL02241___mur 969 --AAACAGACTGTTTTACAATGACAGCAAAGCGACAAACATTCTTGCGAC 1016
BSNT_02513___ 1017 AAGCAAGGCGCTTTCAGCTTTTGATAAGCCGGTCATTCTGCTTGCGGGCG 1066
.|..||.|||||.||.||.|||.|.||||||||||||.||||.||.||.|
BL02241___mur 1017 GAAAAAAGCGCTGTCCGCCTTTCAAAAGCCGGTCATTTTGCTGGCAGGGG 1066
BSNT_02513___ 1067 GACTGGATCGCGGAAATGGTTTTGATGACTTGAAACCTTATATGAAGCAT 1116
|.||.||.||||||||||..||||||||..|.||.||..|||||.....|
BL02241___mur 1067 GGCTTGACCGCGGAAATGAATTTGATGAACTAAAGCCGCATATGTCTTTT 1116
BSNT_02513___ 1117 GTCAAAGCAGTGCTTACATTTGGCCAGACGGCGCCAAAACTCGAGAAACT 1166
||.|||||.|||.|.||.||.|||.||||.|||||.||..|.|||||.||
BL02241___mur 1117 GTAAAAGCGGTGATCACTTTCGGCGAGACCGCGCCGAAGTTTGAGAAGCT 1166
BSNT_02513___ 1167 CGGCAATGAACTGGGAATACAACATGTCAAACGTGTCGATAATGTTGAAC 1216
.|.|.|.|||.|||||||||||||.||.||||||||||||||||||||||
BL02241___mur 1167 GGCCGAAGAAATGGGAATACAACAGGTTAAACGTGTCGATAATGTTGAAC 1216
BSNT_02513___ 1217 AAGCAGTATCTGCGGCGTT-TGCGCTCTCAAATGAAGGAGATGTCATCCT 1265
||||||.|.|||||||||| .|| ||.|||.|.||||||||||||||.||
BL02241___mur 1217 AAGCAGCAACTGCGGCGTTCAGC-CTGTCAGACGAAGGAGATGTCATTCT 1265
BSNT_02513___ 1266 GCTGTCACCCGCGTGTGCGAGCTGGGATCAATTCAAAACATTTGAAGAAC 1315
.|||||.||.||.||.||.|||||||||||.|.|||||||||||||||||
BL02241___mur 1266 TCTGTCCCCGGCCTGCGCAAGCTGGGATCAGTACAAAACATTTGAAGAAC 1315
BSNT_02513___ 1316 GCGGTGACATGTTTATAGATGCCGTGCATATGCTTAAGTAA 1356
|.||||||||||||.||.|.|||||||||||||||||.|||
BL02241___mur 1316 GTGGTGACATGTTTGTAAACGCCGTGCATATGCTTAAATAA 1356
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