Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02512 and BL02240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence dna-align/BSNT_02512___mraY.1.5803.seq
# -bsequence dna-align/BL02240___mraY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02512___mraY-BL02240___mraY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02512___mraY-BL02240___mraY.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02512___mraY
# 2: BL02240___mraY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 994
# Identity: 773/994 (77.8%)
# Similarity: 773/994 (77.8%)
# Gaps: 38/994 ( 3.8%)
# Score: 3000.0
#
#
#=======================================
BSNT_02512___ 1 ATGCTTGAGCAAGTCATTCTGTTTACAATTTTAATGGGGTTTTTAATTAG 50
|||||.||.|||||.|||.|.|||||.|||.|.|||||.||||||||.||
BL02240___mra 1 ATGCTCGAACAAGTAATTTTATTTACCATTATCATGGGCTTTTTAATCAG 50
BSNT_02512___ 51 TGTTCTGCTCTCTCCGATTCTTATTCCGTTTTTAAGAAGATTAAAATTCG 100
.|||||..|.|||||||||.|.|||||||||||||||||..|.|||||||
BL02240___mra 51 CGTTCTTTTATCTCCGATTTTCATTCCGTTTTTAAGAAGGCTGAAATTCG 100
BSNT_02512___ 101 GCCAGAGTATTAGAGAAGAAGGACCGAAATCACATCAGAAAAAATCAGGG 150
|.|||||.||..|.||.|||||.||||||||.||||||||||||||.||.
BL02240___mra 101 GGCAGAGCATCCGTGAGGAAGGTCCGAAATCCCATCAGAAAAAATCGGGA 150
BSNT_02512___ 151 ACACCGACAATGGGCGGGGTCATGATCATACTTTCTATCATAGTGACAAC 200
||.|||||.||||||||.||||||||||||.|.||.||.||.|.|||.||
BL02240___mra 151 ACGCCGACGATGGGCGGCGTCATGATCATATTGTCGATTATCGCGACGAC 200
BSNT_02512___ 201 AATTGTTATGACACAGAAGTTTTCAGAAATAAGCCCCGAA-ATGGTGCTG 249
.|||||||||||...|||.|||||.|||.|.|| |..||| |||.|.||.
BL02240___mra 201 CATTGTTATGACGATGAAATTTTCCGAAGTCAG-CATGAACATGATCCTC 249
BSNT_02512___ 250 CTTCTGTTTGTTACGCTAGGCTACGGTTTGCTTGGCTTTTTAGATGATTA 299
||..|||||||||||.|.||.||||||.||||.||||||.|.||||||||
BL02240___mra 250 CTCTTGTTTGTTACGGTTGGATACGGTCTGCTCGGCTTTCTGGATGATTA 299
BSNT_02512___ 300 CATCAAGGTTGTCATGAAGCGCAATCTTGGATTGACATCAAAGCAAAAGC 349
.||.||.||.||.|||||||||||.||||||.|.|||||.||.|||||.|
BL02240___mra 300 TATTAAAGTCGTGATGAAGCGCAACCTTGGACTCACATCCAAACAAAAAC 349
BSNT_02512___ 350 TGATCGGACAAATTATTATTGCAGTTGTATTTTACGCCGTGTATCATTAC 399
|||||||.||.||..|.|||||..|.|||||.||.||||| |
BL02240___mra 350 TGATCGGTCAGATCGTGATTGCTCTCGTATTCTATGCCGT---------C 390
BSNT_02512___ 400 TACAATTT--------TG-CGACGGATATTCGCATTCCTGGAACTGACTT 440
|||.|.|| || ||||.||.||.||||||||.|||||.||..|
BL02240___mra 391 TACCACTTCCAAGGAATGCCGACTGACATCCGCATTCCGGGAACAGAGCT 440
BSNT_02512___ 441 ATCATTTGATCTT-GGCTGGGCTTACTTTATCCTTGTGC------TCTTT 483
.||.||||| ||| |||||| .||||||| .|||| |||||
BL02240___mra 441 GTCGTTTGA-CTTCGGCTGG-----ATTTATCC-AGTGCTCGTCATCTTT 483
BSNT_02512___ 484 ATGCTTGTCGGCGGATCAAACGCAGTTAACCTGACTGACGGCCTTGACGG 533
||||||||||||||.|||||.||.||.||||||||||||||.||||||||
BL02240___mra 484 ATGCTTGTCGGCGGTTCAAATGCCGTCAACCTGACTGACGGGCTTGACGG 533
BSNT_02512___ 534 GTTATTATCCGGTACTGCGGCGATTGCCTTTGGCGCCTTTGCCATTCTGG 583
..|.||.||.|||||.||.||.||.||.||.||.||.|||||.|||.|||
BL02240___mra 534 TCTGTTGTCGGGTACAGCTGCCATCGCGTTCGGTGCGTTTGCGATTTTGG 583
BSNT_02512___ 584 CATGGAATCAGTCTCAATATGACGTAGCGATTTTCTCAGTTGCCGTTGTC 633
|.|||||.|||||.|||||.||.||.||.||||||.|.||||||||||||
BL02240___mra 584 CGTGGAACCAGTCGCAATACGATGTCGCAATTTTCGCGGTTGCCGTTGTC 633
BSNT_02512___ 634 GGTGCAGTTCTGGGCTTCCTTGTATTTAATGCTCATCCGGCCAAAGTTTT 683
||.||.||..|.||.||.|||||.|||||.||.||.||.||.|||||.||
BL02240___mra 634 GGAGCGGTGTTAGGATTTCTTGTGTTTAACGCGCACCCCGCGAAAGTCTT 683
BSNT_02512___ 684 TATGGGAGATACGGGATCGCTTGCATTGGGAGGAGCCATCGTTACCATTG 733
||||||||||||.||.||||||||..|.||.||.||.||.||.||.||.|
BL02240___mra 684 TATGGGAGATACAGGGTCGCTTGCCCTCGGCGGCGCGATTGTGACGATCG 733
BSNT_02512___ 734 CCATTTTAACGAAATTAGAGATCCTGCTGGTTATCATCGGCGGTGTATTC 783
|.||||||||||||.|.||.||||||||.|||||||||||||||||||||
BL02240___mra 734 CGATTTTAACGAAACTGGAAATCCTGCTTGTTATCATCGGCGGTGTATTC 783
BSNT_02512___ 784 GTTATCGAGACATTATCTGTTATTTTGCAGGTCA--TCAGCTTTAAAACG 831
||.||.||.||..|.||.||.||||||||||||| ||| |||||||||
BL02240___mra 784 GTCATTGAAACGCTGTCCGTCATTTTGCAGGTCATTTCA--TTTAAAACG 831
BSNT_02512___ 832 ACAGGTAAACGAATCTTTAAAATGAGTCCGCTTCATCACCATTATGAGCT 881
||.||.||||||||.||.||||||||.||.|||||.||.||.||.|||||
BL02240___mra 832 ACCGGCAAACGAATTTTCAAAATGAGCCCTCTTCACCATCACTACGAGCT 881
BSNT_02512___ 882 TGTCGGCTGGTCTGAATGGAGAGTAGTCGTGACGTTTTGGGCTGCGGGAC 931
||||||.||||||||.||||||||.|||||.||.||||||.|.|||||.|
BL02240___mra 882 TGTCGGATGGTCTGAGTGGAGAGTTGTCGTCACTTTTTGGACAGCGGGGC 931
BSNT_02512___ 932 TTTTGCTTGCCGTTTTAGGAATTTACATCGAGGTGTGGTTATAA 975
||.||||||||||.||||||||||||||||||||||||||||||
BL02240___mra 932 TTCTGCTTGCCGTCTTAGGAATTTACATCGAGGTGTGGTTATAA 975
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