Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02510 and BL02239
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence dna-align/BSNT_02510___murE.1.5803.seq
# -bsequence dna-align/BL02239___murE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02510___murE-BL02239___murE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02510___murE-BL02239___murE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02510___murE
# 2: BL02239___murE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1525
# Identity: 1091/1525 (71.5%)
# Similarity: 1091/1525 (71.5%)
# Gaps: 98/1525 ( 6.4%)
# Score: 3812.0
#
#
#=======================================
BSNT_02510___ 1 ATGAAACTTACAAAGCTGCTTACATACTTAACAACCGAACCTTC---TGT 47
||||||.|.||||||||.||||||||.||||.||..|.|||||| ||
BL02239___mur 1 ATGAAATTGACAAAGCTTCTTACATATTTAAAAAATGTACCTTCCTATG- 49
BSNT_02510___ 48 AAACGACTCACAAGACCCTGAAATAACTTCAATTGAGATGGACTCCAGGG 97
.||.|..|.||||||||||.||||||||||||||||||||||||||||
BL02239___mur 50 --CCGGCCAAGAAGACCCTGATATAACTTCAATTGAGATGGACTCCAGGG 97
BSNT_02510___ 98 AAGTAAAGAAAGGGAGTCTTTTTGTATGTGTAAAAGGGTATACGGTGGAT 147
||||.||||.|||||||||||||||.|||.|||||||.|||||.||.||.
BL02239___mur 98 AAGTCAAGACAGGGAGTCTTTTTGTTTGTATAAAAGGCTATACAGTCGAC 147
BSNT_02510___ 148 GGCCACGATTTTGCGCAAAAAGCAGTAGAAAACGGTGCAGCGGCTATTGT 197
||.||.||.|..||.|...||||.|..|||||.||.||.||.||.|||||
BL02239___mur 148 GGGCATGACTACGCCCGCCAAGCCGCTGAAAAAGGGGCCGCCGCCATTGT 197
BSNT_02510___ 198 GGCAGAAAGAGAGGTCGATGTGAATGTTCCTGTTATTATTGTCCGGCAGT 247
|||.|||||.||.||.||.|...||||.||.||.|||||..||||.||
BL02239___mur 198 GGCGGAAAGGGAAGTGGACGCCGATGTGCCGGTGATTATCATCCGTCA-- 245
BSNT_02510___ 248 CACTTC-----GCGCGCTCAGCGTTTTGTCTGATGCGTTTTACGGACAGC 292
|.| |.|||||...|||..||||.||.||.||||||||.||||
BL02239___mur 246 ---TACGAAGAGAGCGCTTGCCGTGCTGTCGGACGCTTTTTACGGCCAGC 292
BSNT_02510___ 293 CGACGAAGAAGCTTCAGCTGATTGGGATAACAGGGACAAACGGCAAAACA 342
||||.|||.||||...||||||.||.||.|||||.||.||||||||.|||
BL02239___mur 293 CGACAAAGCAGCTGAGGCTGATCGGAATTACAGGCACGAACGGCAAGACA 342
BSNT_02510___ 343 TCAACGACCCACATGGTCGATGAGATTCTGAAAAAAGCGGGAAAACGCAC 392
||.||..|.||||||||.||.|||||..|.|.||||||.||.|..||.||
BL02239___mur 343 TCGACTTCTCACATGGTGGAGGAGATCTTTAGAAAAGCCGGGAGCCGTAC 392
BSNT_02510___ 393 AGGCTTGATCGGTACAATGTACATGAAAATCGGAGACGAAACACTTCCTG 442
|||..|||||||.||.|||||||.|||||||...|||||||| |
BL02239___mur 393 AGGACTGATCGGCACGATGTACACGAAAATCCACGACGAAAC-------G 435
BSNT_02510___ 443 TT-------AAAAACACGACTCCGGAAAGCGTCACGCTGCAGAAAACGTT 485
|| |||||.|||||.||||||||||||||.||.||.||||||||
BL02239___mur 436 TTCGAGGCGAAAAATACGACGCCGGAAAGCGTCACACTTCAAAAAACGTT 485
BSNT_02510___ 486 TAAGAAAATGAATGACAAGCATGTTGACACTGCAATCATGGAGGTTTCTT 535
||..||||||..|||..||..|||.||.||.||..|||||||.||.||||
BL02239___mur 486 TAGAAAAATGGTTGATCAGGGTGTGGATACAGCCGTCATGGAAGTATCTT 535
BSNT_02510___ 536 CCCACGCTTTGTCT----TTAGGACGCGTCCATGGCTGTGATTATGATAT 581
|.||||| ||| .|.||.||.||.||.||.||||||||.|||||
BL02239___mur 536 CACACGC----TCTCCACATGGGCCGGGTGCACGGGTGTGATTACGATAT 581
BSNT_02510___ 582 TGCCGTGTTTACGAATTTAACACAGGACCATCTGGACTATCATAAAACGA 631
.||||..|||||.||..|.||.||||||||.||.|||||.||..|.||.|
BL02239___mur 582 CGCCGCATTTACAAACCTGACCCAGGACCACCTCGACTACCACGAGACAA 631
BSNT_02510___ 632 TGGATGAGTACCGGCATGCAAAAAGCTTGCTCTTTTCCCAACTTGGCGGG 681
||||.||.||....|||||.|||||..||||.||.||.||.||.|||||.
BL02239___mur 632 TGGAAGAATATAAACATGCGAAAAGTCTGCTTTTCTCGCAGCTCGGCGGA 681
BSNT_02510___ 682 GCTTTCAACCATG-AACATCCAAAGCGTGCCGTCCTGAATGCTGACGATG 730
.|.||.|||||.| |||| ||.|||.|.|||||.||||||||.||.||
BL02239___mur 682 TCCTTTAACCACGAAACA-CCGAAGTGGGCCGTGCTGAATGCGGATGA-- 728
BSNT_02510___ 731 AGGCGAGC----GCTTATTTTGAAAAGGTAACAGCTGCGCATATCTCTAC 776
.|..|| ||.|||||.|...|.||.||..|.||.|||.|.|..||
BL02239___mur 729 --CCCTGCTTCAGCCTATTTCGCCCAAGTGACGTCAGCACATCTTTTGAC 776
BSNT_02510___ 777 ATACGGAATTAAAAACGATGCTGATGTGATGGC-GAAGAACATCAGTATC 825
||||||||||.||||||||||.|||||.||||| ||| ||.||||..||.
BL02239___mur 777 ATACGGAATTCAAAACGATGCCGATGTCATGGCTGAA-AATATCAAAATG 825
BSNT_02510___ 826 ACTGC-ACAGGGCACAAGCTTTGATCTCGTGACAAACAAAGGCACGAAGC 874
.||.| |.|||| ||||.||||||.||.|||||....|||||..| .||
BL02239___mur 826 GCTCCGAAAGGG-ACAACCTTTGACCTGGTGACGCCAAAAGGTTC--TGC 872
BSNT_02510___ 875 ACA--TCACGATGTCTCTCGTCGGACAATTTAATGTGTA--------TAA 914
||| |.|||||..|.||.|||||.|..|||||.||.|| |||
BL02239___mur 873 ACAAGTGACGATTCCGCTTGTCGGCCTGTTTAACGTCTACAATGTTTTAA 922
BSNT_02510___ 915 CGTGCTGGCCGCTGTTGCGACATGTATTGCAGCAGGCATACCGTTTGAAA 964
|| ||| |||||..|.||| ||||||||.|..||.|||||||..|
BL02239___mur 923 CG-GCT-GCCGCGATCGCG------ATTGCAGCGGATATCCCGTTTGCCA 964
BSNT_02510___ 965 TCATCACTGAGGCTGTTGAAGAATTGCATGGTGTAAGAGGCCGTTTTGAA 1014
..||.||.||.|...||||||...||.|.||.||.|||||..|.|||||.
BL02239___mur 965 CGATTACAGAAGGAATTGAAGGGCTGAAAGGGGTCAGAGGAAGATTTGAG 1014
BSNT_02510___ 1015 TTGGTCAATCAGCAG--CAGGAGTTTCCTGTCATTGTAGACTACGCGCAC 1062
.|.||..| .|||| |||||.||.||.||.||.||.||.||.||.||.
BL02239___mur 1015 CTTGTGGA--CGCAGGCCAGGACTTCCCGGTGATCGTCGATTATGCCCAT 1062
BSNT_02510___ 1063 ACACCGGACAGCCTTGAAAATGTGCTGGAGACATGCAGAGACATGACGGA 1112
||.||.||||||||.||||||||..||.|.||.|||||||.|.|.|||||
BL02239___mur 1063 ACCCCTGACAGCCTCGAAAATGTCTTGAATACGTGCAGAGGCTTAACGGA 1112
BSNT_02510___ 1113 AGGAAAGCTATTTGTCGTTGTCGGCTGCGGAGGAGACAGAGATAAGACGA 1162
|||||||||.||||||||.|||||||||||.||||||.|.||||||||||
BL02239___mur 1113 AGGAAAGCTGTTTGTCGTCGTCGGCTGCGGTGGAGACCGCGATAAGACGA 1162
BSNT_02510___ 1163 AGCGCCCGAAAATGGCTAAAATTGCTGTGGAGCTGGCTGACGAGCCGATT 1212
||||.|||||||||||.||.||.||.||.||.||.|||||.||.||..|.
BL02239___mur 1163 AGCGTCCGAAAATGGCGAAGATCGCCGTTGACCTTGCTGATGAACCCGTC 1212
BSNT_02510___ 1213 TTCACGTCAGATAACCCGAGAAGCGAAGATCCTCGCGCGATTTTAAGAGA 1262
||.||..|.||||||||||||||||||.|.||.|.|||.|||||||..||
BL02239___mur 1213 TTTACAGCCGATAACCCGAGAAGCGAAAACCCGCTCGCCATTTTAAACGA 1262
BSNT_02510___ 1263 TATGGAAGCCGGAGTAGA--GAACGCATACTATCACAGTATTGCAAACCG 1310
||||||.|..||.|||.| || ||.|||||||||||.||.|..|||||
BL02239___mur 1263 TATGGAGGAAGGCGTAAAAGGA--GCTTACTATCACAGCATCGTCAACCG 1310
BSNT_02510___ 1311 CGAGCAGGCGATCTTTTTCGCAATTGCCAATGCCAAAAAAGGCGACGTTG 1360
||||||.|||||||||||.||||||||.||.||||||||||||||.||.|
BL02239___mur 1311 CGAGCAAGCGATCTTTTTTGCAATTGCAAACGCCAAAAAAGGCGATGTCG 1360
BSNT_02510___ 1361 TCCTCATTGCCGGAAAAGGACATGAAACCTATCAGCAGATCGGAAATGAA 1410
||||.|||||.||.|||||.||||||||.||.|||||||||||...|.||
BL02239___mur 1361 TCCTGATTGCAGGCAAAGGCCATGAAACTTACCAGCAGATCGGCGGTCAA 1410
BSNT_02510___ 1411 ACTTTCGATTTTGATGATGCTGAAGTAGCGGCGAGAGCCATTGTTGAACT 1460
||.||.|||||||||||.|||||.||.||....|||||||||.||||.||
BL02239___mur 1411 ACCTTTGATTTTGATGACGCTGAGGTGGCCAAAAGAGCCATTCTTGAGCT 1460
BSNT_02510___ 1461 CAATAAGAATAAGACGAATTCATAG 1485
.| |||||
BL02239___mur 1461 GA-----AATAA------------- 1467
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