Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02505 and BL02234
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:05
# Commandline: needle
# -asequence dna-align/BSNT_02505___mraW.1.5803.seq
# -bsequence dna-align/BL02234___mraW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02505___mraW-BL02234___mraW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02505___mraW-BL02234___mraW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02505___mraW
# 2: BL02234___mraW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 947
# Identity: 716/947 (75.6%)
# Similarity: 716/947 (75.6%)
# Gaps: 19/947 ( 2.0%)
# Score: 2618.0
#
#
#=======================================
BSNT_02505___ 1 ATGTTTCAACACAAGACAGTACTTCTT-CGTGAAACCGTAGACGGACTTA 49
||||||.|.||.|..|||||| ||.|| ...|||||.||.||.||..|.|
BL02234___mra 1 ATGTTTGAGCATACAACAGTA-TTATTAAAAGAAACAGTTGATGGTTTAA 49
BSNT_02505___ 50 ATATTAAACCAGACGGTACATATGTAGACTGCACACTCGGCGGAGCTGGG 99
||.|.|||..|||||||||||||||||||||||||.|.|||||.||.||.
BL02234___mra 50 ATGTAAAAGAAGACGGTACATATGTAGACTGCACATTAGGCGGTGCCGGT 99
BSNT_02505___ 100 CATAGTACATACTT-ATTGCAGCAGTTATCCGAGAAGGGGCGTTTAATCG 148
||.||....||.|| .||.|| |||.|.||.||.||.||....||..|||
BL02234___mra 100 CACAGCGAGTATTTGCTTTCA-CAGCTGTCTGAAAAAGGCAAATTGGTCG 148
BSNT_02505___ 149 CTTTTGACCAAGATGATACGGCATTACAGCATGCTAAAGAAGTGTTGTCC 198
||||||||||.|||||.||.|||.|.|..|||||.||.|||....||.|.
BL02234___mra 149 CTTTTGACCAGGATGAAACCGCACTCCGCCATGCGAAGGAAAAACTGGCG 198
BSNT_02505___ 199 GATTATAAAGGACAGCTCATTCTGATTAAAAGCAATTTCAGGTATTTAAA 248
||||||.|||||||..||.||.|.||.|||||||||||..||||||||||
BL02234___mra 199 GATTATGAAGGACAAGTCGTTTTCATAAAAAGCAATTTTCGGTATTTAAA 248
BSNT_02505___ 249 AGAATGTTTGAATGAACAAGGCATTACAGAAGTAGACGGTATTTTATTTG 298
|||..||.|.||.|||...|||||.||..||||.||||||.|||||||||
BL02234___mra 249 AGACCGTCTAAACGAAATCGGCATCACGAAAGTGGACGGTGTTTTATTTG 298
BSNT_02505___ 299 ATTTAGGGGTGTCCTCTCCGCAGCTGGATACACCTGAGCGCGGATTCAGT 348
|||||||.||.||.|||||.||||||||||||||.||..|.||.|||||.
BL02234___mra 299 ATTTAGGCGTCTCATCTCCTCAGCTGGATACACCCGAAAGGGGCTTCAGC 348
BSNT_02505___ 349 TACCATCATGACGCACCGTTGGACATGAGGATGGACCAGTCGGCTACGCT 398
||.||||||||.|||||..|.||.|||.|.||||||||||||||....||
BL02234___mra 349 TATCATCATGATGCACCTCTTGATATGCGAATGGACCAGTCGGCGGGCCT 398
BSNT_02505___ 399 TTCGGCGAAAGAAGTCGTTAATGAGTGGCGCTATGAGGATCTCGTCCGTA 448
||||||.||.||||||||.|||||.||||..||||||||||||||....|
BL02234___mra 399 TTCGGCAAAGGAAGTCGTCAATGAATGGCCTTATGAGGATCTCGTGAAAA 448
BSNT_02505___ 449 TTTTCTTTAAATACGGAGAAGAGAAGTTCAGTAAACAGATCGCCAGAAAA 498
|.|||||||||||||||||||||||||||||.||.||.||.|||||.|||
BL02234___mra 449 TCTTCTTTAAATACGGAGAAGAGAAGTTCAGCAAGCAAATTGCCAGGAAA 498
BSNT_02505___ 499 ATTGAGGAGGCAAGAATGA--AGTCTCCTATTCAAACTACGGGCCAACTG 546
||.||..|.|||||| || |.||.||||||.||||.||.|||||.||.
BL02234___mra 499 ATCGAAAAAGCAAGA--GAACAATCGCCTATTGAAACAACAGGCCAGCTT 546
BSNT_02505___ 547 GTCGATCTAATAAAAGACGCGATTCCCGCTCCAGCGAGAAGGAGCGGCGG 596
||||||.|.||.|||||.|||||||||||.||.||.|||||.||||||||
BL02234___mra 547 GTCGATATCATCAAAGAGGCGATTCCCGCACCGGCAAGAAGAAGCGGCGG 596
BSNT_02505___ 597 ACATCCCGCTAAACGCGTGTTTCAGGCAATCAGAATTGCCGTAAACGATG 646
.|||||.||||||||..|.||.|||||.||..|||||||.||||||||||
BL02234___mra 597 GCATCCGGCTAAACGGATCTTCCAGGCGATTCGAATTGCGGTAAACGATG 646
BSNT_02505___ 647 AACTTAGGGTGTTTGAAGAAGC---TTTGGAGCAGGCAATTGAGGTTCTG 693
|..|.|||||.||||||||||| ||| ||||||.||||||||.|||
BL02234___mra 647 AGTTGAGGGTATTTGAAGAAGCGCTTTT---GCAGGCGATTGAGGTGCTG 693
BSNT_02505___ 694 AAGCCAGGGGGCAGGGTATCGGTCATTACCTTCCACTCGCTAGAAGACAG 743
|||||.||.||.||.|||||||||||.||.|||||||||||.||||||.|
BL02234___mra 694 AAGCCGGGCGGAAGAGTATCGGTCATCACATTCCACTCGCTGGAAGACCG 743
BSNT_02505___ 744 AATTTGCAAAACCACTTTTAAAGAAAAGTCGTCGCTTCCGGAACTTCCTC 793
.||.||||||.|.||.||||||||.|.||||||||.|||.|||||.||||
BL02234___mra 744 GATCTGCAAATCGACATTTAAAGACATGTCGTCGCCTCCTGAACTGCCTC 793
BSNT_02505___ 794 CGGGGCTTCCTGTTATACCGGAAGAGTTTGAACCGGAGCTGAAGCTCATC 843
..||.||.||.||.||.||..|.||||||||||||.|..|.||..|..||
BL02234___mra 794 ACGGACTGCCCGTGATCCCCAAGGAGTTTGAACCGAAATTAAAATTAGTC 843
BSNT_02505___ 844 ACAC-GAAAACCGATTACGGCATCTCAAGAAGAGCTTGAAGAGAACAACC 892
| || ||||.|||||.||.||.||..||||.|||||||||.|.||.||||
BL02234___mra 844 A-ACAGAAAGCCGATCACAGCTTCCGAAGAGGAGCTTGAACACAATAACC 892
BSNT_02505___ 893 GGGCTCGTTCTGCCAAGCTTCGGATTGCTGAAAA---AAGAAAATAA 936
|.||.||.||.||.|||||.||.||.||.||||| |.||.|.|.|
BL02234___mra 893 GTGCGCGCTCAGCGAAGCTGCGCATCGCGGAAAAAGCACGAGAGTGA 939
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