Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03425 and BL02231
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence dna-align/BSNT_03425___ypbD.1.5803.seq
# -bsequence dna-align/BL02231.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03425___ypbD-BL02231.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03425___ypbD-BL02231.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03425___ypbD
# 2: BL02231
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 670
# Identity: 418/670 (62.4%)
# Similarity: 418/670 (62.4%)
# Gaps: 92/670 (13.7%)
# Score: 1254.5
#
#
#=======================================
BSNT_03425___ 1 ---------------------------------ATGACTGACCGTGATAT 17
.||.|.|||.|.||.||
BL02231 1 ATGCTGAAAAAACAGTCGGAAATCATACGTCGCCTGTCAGACGGGGAAAT 50
BSNT_03425___ 18 GCTGAAGCAGTTATATTTGACGCAGCTACTCATCATCTTTGCCGC----- 62
||||||.|||.|.|||||..|.|||...||.||..|.|||.||||
BL02231 51 GCTGAAACAGCTCTATTTTTCCCAGACGCTGATGCTTTTTACCGCATTAT 100
BSNT_03425___ 63 TGCTGCAGCAGGACTGTTCTTTTTTGAGGATGTACGGGACG---TATTAA 109
||.|| ||..|.||.||.|||||.||||.| |||| |..||.
BL02231 101 TGATG-----GGCATCTTTTTATTTGATGATGCA---GACGCTTTTCTAT 142
BSNT_03425___ 110 AGCTCTGGGA--CATTCGCGATATGCGAATCATCTG--GTATGGTGTTTC 155
.|||.|||.| || ||| ||..||.|.||| ||| |||.||.|...|
BL02231 143 CGCTTTGGAATCCA-TCG-GACTTGAGCATC--CTGAAGTACGGGGCGCC 188
BSNT_03425___ 156 TATAGCTGTTATTGTTATTTTAGCCGATATGGCAGTAATGAAATGGTTTC 205
..|.||.|.|.|.||.||..|.|||||..||...||.|||||||||..||
BL02231 189 GCTCGCGGCTCTCGTGATCATCGCCGACCTGATGGTGATGAAATGGGCTC 238
BSNT_03425___ 206 CGTCTCATTTATATGATGACGGCGGAATCAATAAAAAAATATTCAGTAAG 255
|....|||.|.|||||.||.|..||.||.|||.||||..|.||..||.|.
BL02231 239 CCAAGCATATGTATGACGATGAAGGGATAAATGAAAAGCTCTTTCGTGAA 288
BSNT_03425___ 256 AGGTC-AATCCCTCATATTAT-ATTTTTAACGCTTCTGATTGCTTTCGCG 303
.|.|| .|| ||.|||||..| |||.|| ||.|||.|.|||||.||.||.
BL02231 289 CGCTCGTAT-CCGCATATCGTGATTCTT-ACCCTTTTCATTGCATTTGCA 336
BSNT_03425___ 304 GAAGAAATGTTATTCAGAGGAGTGCTGCAGACTCATATCGGTTTATGGGC 353
||.|||||.||.|||||.||.||..|.|||||.|||.|||||.|.|||||
BL02231 337 GAGGAAATATTGTTCAGGGGCGTTATCCAGACGCATTTCGGTCTCTGGGC 386
BSNT_03425___ 354 GGCCAGCCTTATATTTGCCGCT-CTGCACTTTCGGTATTTGTCAAAATGG 402
|||.|||.|||| |||..||.| .||||.|||||.|||||...|||||||
BL02231 387 GGCGAGCATTAT-TTTCGCGATATTGCATTTTCGTTATTTAAAAAAATGG 435
BSNT_03425___ 403 CTGTTATTTATTATGGTGACAGCAATCAGCTTTTTGCTCGGTCTGATGTA 452
|||.|.|||.|.||||||....|.|||||||||||||||||..|||..|.
BL02231 436 CTGCTGTTTGTAATGGTGGTGTCCATCAGCTTTTTGCTCGGATTGAGCTT 485
BSNT_03425___ 453 TGAATGGACCGGCAACTTATTTGTTCCGATGACGGCGCATTTTATCATTG 502
||||.||||.||.||.|||||||||||..|.|||||.||||||.|.||.|
BL02231 486 TGAACGGACAGGGAATTTATTTGTTCCTGTCACGGCACATTTTTTGATCG 535
BSNT_03425___ 503 ATGCCGTGTTTGCCTGTCAGATTCGTTTTGAACATGTGAGGAGGGATAAA 552
|||..||.|||||.||.||||||||||||.||||.||.||||||..|..|
BL02231 536 ATGTTGTATTTGCGTGCCAGATTCGTTTTCAACACGTAAGGAGGAGTTCA 585
BSNT_03425___ 553 CATGACGAACATGTCGAGAGTAGAGA-GAAGAA-------------AAGC 588
|||||||.|.|||||.|||.|||||| |||||| |||.
BL02231 586 CATGACGGAGATGTCAAGAATAGAGAGGAAGAAGAGGGAACAGGAGAAGG 635
BSNT_03425___ 589 CCA-----GAATCTTTATGA 603
||| ||
BL02231 636 CCAGCGCTGA---------- 645
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