Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03418 and BL02226
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence dna-align/BSNT_03418___gudB.1.5803.seq
# -bsequence dna-align/BL02226___gudB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03418___gudB-BL02226___gudB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03418___gudB-BL02226___gudB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03418___gudB
# 2: BL02226___gudB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1275
# Identity: 1040/1275 (81.6%)
# Similarity: 1040/1275 (81.6%)
# Gaps: 0/1275 ( 0.0%)
# Score: 4260.0
#
#
#=======================================
BSNT_03418___ 1 ATGGCAGCCGATCGAAACACCGGTCATACAGAAGAGGACAAACTTGATGT 50
||||.||||||||.|||||||||||||||.|||||..|||.||.|||.||
BL02226___gud 1 ATGGTAGCCGATCAAAACACCGGTCATACTGAAGAAAACACACATGACGT 50
BSNT_03418___ 51 ATTAAAATCAACCCAAACCGTAATACATAAGGCTCTGGAAAAATTGGGAT 100
.||.||||||||.|||||.||.|||||||||||.||.|||||||||||||
BL02226___gud 51 TTTGAAATCAACGCAAACGGTGATACATAAGGCGCTTGAAAAATTGGGAT 100
BSNT_03418___ 101 ATCCCGAAGAGGTATACGAATTGTTAAAAGAGCCGATGAGATTATTAACG 150
||||.||||||||.||.|||||..|||||||.|||||..|.||.||||||
BL02226___gud 101 ATCCTGAAGAGGTGTATGAATTACTAAAAGAACCGATTCGTTTTTTAACG 150
BSNT_03418___ 151 GTAAAAATACCTGTTCGTATGGACGACGGTTCAGTTAAGATTTTCACAGG 200
||.|||||.||.|||||.||||||||.||.||.||||||||||||||.||
BL02226___gud 151 GTGAAAATTCCGGTTCGCATGGACGATGGATCTGTTAAGATTTTCACGGG 200
BSNT_03418___ 201 ATATCGTGCGCAGCACAATGACTCTGTCGGTCCAACGAAAGGCGGGATAC 250
.||.||.||.|||||||||||..|.||.||.||.||.||||||||.||.|
BL02226___gud 201 CTACCGAGCCCAGCACAATGATGCAGTAGGGCCGACAAAAGGCGGCATCC 250
BSNT_03418___ 251 GTTTTCACCCGAATGTAACAGAAAAAGAGGTGAAGGCGCTTTCAATTTGG 300
|||||||.|||...||.|||||||||||.||.||.||||||||.||||||
BL02226___gud 251 GTTTTCATCCGGGAGTTACAGAAAAAGAAGTTAAAGCGCTTTCTATTTGG 300
BSNT_03418___ 301 ATGAGTTTAAAATGCGGCATAATTGATCTTCCATATGGCGGTGGTAAAGG 350
||||||.|.|||||||||||.||.||.|||||||||||.||.||.||.||
BL02226___gud 301 ATGAGTCTGAAATGCGGCATCATCGACCTTCCATATGGAGGCGGAAAGGG 350
BSNT_03418___ 351 CGGAATTGTTTGTGATCCAAGGGATATGTCGTTTAGAGAGCTGGAGCGTC 400
|||.||..|.||||||||..||||||||||.|||...||.|||||.|||.
BL02226___gud 351 CGGGATCATCTGTGATCCGCGGGATATGTCCTTTCCTGAACTGGAACGTT 400
BSNT_03418___ 401 TGAGCAGAGGGTATGTCAGAGCGATCAGCCAAATTGTCGGCCCGACAAAA 450
|.|||||||||||.||..|.||||||||||||||||||||.|||||||||
BL02226___gud 401 TAAGCAGAGGGTACGTTCGGGCGATCAGCCAAATTGTCGGACCGACAAAA 450
BSNT_03418___ 451 GACGTGCCGGCACCGGATGTATTTACAAACTCACAAATCATGGCTTGGAT 500
|||||.|||||.||.|||||||||||.||.||.|||||||||||.|||||
BL02226___gud 451 GACGTACCGGCTCCCGATGTATTTACCAATTCTCAAATCATGGCATGGAT 500
BSNT_03418___ 501 GATGGATGAGTATTCAAGAATTGATGAATTTAATTCGCCTGGATTTATTA 550
||||||.||.|||||||||||.||.|||||.||.|||||.||.||.||||
BL02226___gud 501 GATGGACGAATATTCAAGAATCGACGAATTCAACTCGCCGGGCTTCATTA 550
BSNT_03418___ 551 CAGGCAAACCGCTTGTGCTTGGCGGATCTCACGGGAGAGAATCTGCGACA 600
|.|||||||||||.||..|.||.||.||||||||.|||||||||||||||
BL02226___gud 551 CCGGCAAACCGCTCGTTTTAGGTGGTTCTCACGGCAGAGAATCTGCGACA 600
BSNT_03418___ 601 GCAAAAGGTGTTACCATCTGTATTAAAGAAGCGGCTAAGAAGAGAGGCAT 650
||||||||.|||||.|||||.||||||||.|||||.||.||||.|..|||
BL02226___gud 601 GCAAAAGGGGTTACAATCTGCATTAAAGAGGCGGCGAAAAAGAAAAACAT 650
BSNT_03418___ 651 CGATATTAAAGGTGCGCGTGTCGTTGTCCAAGGCTTCGGAAACGCGGGAA 700
|||.|||.|.||.||...||||||.||.||.||.||||||||.|||||||
BL02226___gud 651 CGACATTGAGGGAGCTTCTGTCGTCGTGCAGGGGTTCGGAAATGCGGGAA 700
BSNT_03418___ 701 GCTATTTGGCAAAATTTATGCATGATGCGGGGGCAAAAGTTGTCGGCATC 750
||||..|.||.|||||.|||.||||.||.||.|||||.|||||||||||.
BL02226___gud 701 GCTACCTTGCGAAATTCATGTATGACGCAGGTGCAAAGGTTGTCGGCATT 750
BSNT_03418___ 751 TCAGATGCGTATGGCGGACTTTATGATCCGGAAGGCCTTGATATCGATTA 800
||.|||||.||.|||||.||.||.|||||.|||||.|||||.||||||||
BL02226___gud 751 TCTGATGCATACGGCGGCCTGTACGATCCTGAAGGGCTTGACATCGATTA 800
BSNT_03418___ 801 TTTACTCGACCGACGCGACAGCTTCGGTACCGTAACAAAGCTTTTCAACG 850
..|.||.|||||.||.|||||||||||.||.||.||||||||.||.||.|
BL02226___gud 801 CCTGCTTGACCGCCGAGACAGCTTCGGAACGGTCACAAAGCTGTTTAATG 850
BSNT_03418___ 851 ATACCATTACCAACCAAGAGCTGCTGGAGCTGGATTGTGATATTCTCGTT 900
|.||||||||.|||.||||.||||||||||||||.||.||.|||||.||.
BL02226___gud 851 ACACCATTACAAACAAAGAACTGCTGGAGCTGGAGTGCGACATTCTTGTG 900
BSNT_03418___ 901 CCTGCTGCGATTGAAAATCAAATTACAGAAGAAAATGCCCATAATATTCG 950
||.|||||.||.||||||||||||||.|..|||||.||||||||.||...
BL02226___gud 901 CCGGCTGCCATAGAAAATCAAATTACCGCGGAAAACGCCCATAACATCAA 950
BSNT_03418___ 951 GGCTAAAATTGTCGTTGAAGCAGCGAACGGACCAACAACGCTTGAAGGAA 1000
|||.|||||.||.||.|||||.||.|||||.||.||.|||||.||||..|
BL02226___gud 951 GGCGAAAATCGTTGTCGAAGCTGCCAACGGCCCGACGACGCTCGAAGCGA 1000
BSNT_03418___ 1001 CAAAGATTCTTTCAGACCGGGACATTCTGCTTGTACCAGACGTGCTGGCA 1050
|.||.||||||||.|||||.||||||||.||||||||.||||||||||||
BL02226___gud 1001 CGAAAATTCTTTCCGACCGCGACATTCTTCTTGTACCGGACGTGCTGGCA 1050
BSNT_03418___ 1051 AGTGCCGGTGGCGTAACAGTTTCTTATTTTGAATGGGTTCAGAATAACCA 1100
||.|||||.||.|||||.||.||.||||||||.|||||.||.||.|||||
BL02226___gud 1051 AGCGCCGGCGGTGTAACGGTATCCTATTTTGAGTGGGTGCAAAACAACCA 1100
BSNT_03418___ 1101 AGGCTTCTACTGGAGTGAAGAAGAGGTAGAAGAAAAATTAGAAAAAATGA 1150
.||.||||||||||.|||||||||.||.||||||...||.||||||||||
BL02226___gud 1101 GGGATTCTACTGGACTGAAGAAGAAGTTGAAGAACGTTTGGAAAAAATGA 1150
BSNT_03418___ 1151 TGGTCAAATCATTTAACAATATTTATGAAATGGCTAACAACCGAAGAATT 1200
||||||||||.||.|||||.||||||||||||||..|||||||.||||||
BL02226___gud 1151 TGGTCAAATCGTTCAACAACATTTATGAAATGGCGCACAACCGCAGAATT 1200
BSNT_03418___ 1201 GACATGAGGCTCGCTGCATATATGGTCGGCGTTCGCAAAATGGCTGAAGC 1250
|||||||||||.||.||.||||||||.|||||.|||||.|||||.|||||
BL02226___gud 1201 GACATGAGGCTTGCAGCCTATATGGTGGGCGTCCGCAAGATGGCGGAAGC 1250
BSNT_03418___ 1251 TTCGCGTTTTAGAGGCTGGATATAA 1275
.||.||.||.||||||||||||||.
BL02226___gud 1251 ATCCCGCTTCAGAGGCTGGATATAG 1275
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