Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03418 and BL02226

See Amino acid alignment / Visit BSNT_03418 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:22
# Commandline: needle
#    -asequence dna-align/BSNT_03418___gudB.1.5803.seq
#    -bsequence dna-align/BL02226___gudB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03418___gudB-BL02226___gudB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03418___gudB-BL02226___gudB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03418___gudB
# 2: BL02226___gudB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1275
# Identity:    1040/1275 (81.6%)
# Similarity:  1040/1275 (81.6%)
# Gaps:           0/1275 ( 0.0%)
# Score: 4260.0
# 
#
#=======================================

BSNT_03418___      1 ATGGCAGCCGATCGAAACACCGGTCATACAGAAGAGGACAAACTTGATGT     50
                     ||||.||||||||.|||||||||||||||.|||||..|||.||.|||.||
BL02226___gud      1 ATGGTAGCCGATCAAAACACCGGTCATACTGAAGAAAACACACATGACGT     50

BSNT_03418___     51 ATTAAAATCAACCCAAACCGTAATACATAAGGCTCTGGAAAAATTGGGAT    100
                     .||.||||||||.|||||.||.|||||||||||.||.|||||||||||||
BL02226___gud     51 TTTGAAATCAACGCAAACGGTGATACATAAGGCGCTTGAAAAATTGGGAT    100

BSNT_03418___    101 ATCCCGAAGAGGTATACGAATTGTTAAAAGAGCCGATGAGATTATTAACG    150
                     ||||.||||||||.||.|||||..|||||||.|||||..|.||.||||||
BL02226___gud    101 ATCCTGAAGAGGTGTATGAATTACTAAAAGAACCGATTCGTTTTTTAACG    150

BSNT_03418___    151 GTAAAAATACCTGTTCGTATGGACGACGGTTCAGTTAAGATTTTCACAGG    200
                     ||.|||||.||.|||||.||||||||.||.||.||||||||||||||.||
BL02226___gud    151 GTGAAAATTCCGGTTCGCATGGACGATGGATCTGTTAAGATTTTCACGGG    200

BSNT_03418___    201 ATATCGTGCGCAGCACAATGACTCTGTCGGTCCAACGAAAGGCGGGATAC    250
                     .||.||.||.|||||||||||..|.||.||.||.||.||||||||.||.|
BL02226___gud    201 CTACCGAGCCCAGCACAATGATGCAGTAGGGCCGACAAAAGGCGGCATCC    250

BSNT_03418___    251 GTTTTCACCCGAATGTAACAGAAAAAGAGGTGAAGGCGCTTTCAATTTGG    300
                     |||||||.|||...||.|||||||||||.||.||.||||||||.||||||
BL02226___gud    251 GTTTTCATCCGGGAGTTACAGAAAAAGAAGTTAAAGCGCTTTCTATTTGG    300

BSNT_03418___    301 ATGAGTTTAAAATGCGGCATAATTGATCTTCCATATGGCGGTGGTAAAGG    350
                     ||||||.|.|||||||||||.||.||.|||||||||||.||.||.||.||
BL02226___gud    301 ATGAGTCTGAAATGCGGCATCATCGACCTTCCATATGGAGGCGGAAAGGG    350

BSNT_03418___    351 CGGAATTGTTTGTGATCCAAGGGATATGTCGTTTAGAGAGCTGGAGCGTC    400
                     |||.||..|.||||||||..||||||||||.|||...||.|||||.|||.
BL02226___gud    351 CGGGATCATCTGTGATCCGCGGGATATGTCCTTTCCTGAACTGGAACGTT    400

BSNT_03418___    401 TGAGCAGAGGGTATGTCAGAGCGATCAGCCAAATTGTCGGCCCGACAAAA    450
                     |.|||||||||||.||..|.||||||||||||||||||||.|||||||||
BL02226___gud    401 TAAGCAGAGGGTACGTTCGGGCGATCAGCCAAATTGTCGGACCGACAAAA    450

BSNT_03418___    451 GACGTGCCGGCACCGGATGTATTTACAAACTCACAAATCATGGCTTGGAT    500
                     |||||.|||||.||.|||||||||||.||.||.|||||||||||.|||||
BL02226___gud    451 GACGTACCGGCTCCCGATGTATTTACCAATTCTCAAATCATGGCATGGAT    500

BSNT_03418___    501 GATGGATGAGTATTCAAGAATTGATGAATTTAATTCGCCTGGATTTATTA    550
                     ||||||.||.|||||||||||.||.|||||.||.|||||.||.||.||||
BL02226___gud    501 GATGGACGAATATTCAAGAATCGACGAATTCAACTCGCCGGGCTTCATTA    550

BSNT_03418___    551 CAGGCAAACCGCTTGTGCTTGGCGGATCTCACGGGAGAGAATCTGCGACA    600
                     |.|||||||||||.||..|.||.||.||||||||.|||||||||||||||
BL02226___gud    551 CCGGCAAACCGCTCGTTTTAGGTGGTTCTCACGGCAGAGAATCTGCGACA    600

BSNT_03418___    601 GCAAAAGGTGTTACCATCTGTATTAAAGAAGCGGCTAAGAAGAGAGGCAT    650
                     ||||||||.|||||.|||||.||||||||.|||||.||.||||.|..|||
BL02226___gud    601 GCAAAAGGGGTTACAATCTGCATTAAAGAGGCGGCGAAAAAGAAAAACAT    650

BSNT_03418___    651 CGATATTAAAGGTGCGCGTGTCGTTGTCCAAGGCTTCGGAAACGCGGGAA    700
                     |||.|||.|.||.||...||||||.||.||.||.||||||||.|||||||
BL02226___gud    651 CGACATTGAGGGAGCTTCTGTCGTCGTGCAGGGGTTCGGAAATGCGGGAA    700

BSNT_03418___    701 GCTATTTGGCAAAATTTATGCATGATGCGGGGGCAAAAGTTGTCGGCATC    750
                     ||||..|.||.|||||.|||.||||.||.||.|||||.|||||||||||.
BL02226___gud    701 GCTACCTTGCGAAATTCATGTATGACGCAGGTGCAAAGGTTGTCGGCATT    750

BSNT_03418___    751 TCAGATGCGTATGGCGGACTTTATGATCCGGAAGGCCTTGATATCGATTA    800
                     ||.|||||.||.|||||.||.||.|||||.|||||.|||||.||||||||
BL02226___gud    751 TCTGATGCATACGGCGGCCTGTACGATCCTGAAGGGCTTGACATCGATTA    800

BSNT_03418___    801 TTTACTCGACCGACGCGACAGCTTCGGTACCGTAACAAAGCTTTTCAACG    850
                     ..|.||.|||||.||.|||||||||||.||.||.||||||||.||.||.|
BL02226___gud    801 CCTGCTTGACCGCCGAGACAGCTTCGGAACGGTCACAAAGCTGTTTAATG    850

BSNT_03418___    851 ATACCATTACCAACCAAGAGCTGCTGGAGCTGGATTGTGATATTCTCGTT    900
                     |.||||||||.|||.||||.||||||||||||||.||.||.|||||.||.
BL02226___gud    851 ACACCATTACAAACAAAGAACTGCTGGAGCTGGAGTGCGACATTCTTGTG    900

BSNT_03418___    901 CCTGCTGCGATTGAAAATCAAATTACAGAAGAAAATGCCCATAATATTCG    950
                     ||.|||||.||.||||||||||||||.|..|||||.||||||||.||...
BL02226___gud    901 CCGGCTGCCATAGAAAATCAAATTACCGCGGAAAACGCCCATAACATCAA    950

BSNT_03418___    951 GGCTAAAATTGTCGTTGAAGCAGCGAACGGACCAACAACGCTTGAAGGAA   1000
                     |||.|||||.||.||.|||||.||.|||||.||.||.|||||.||||..|
BL02226___gud    951 GGCGAAAATCGTTGTCGAAGCTGCCAACGGCCCGACGACGCTCGAAGCGA   1000

BSNT_03418___   1001 CAAAGATTCTTTCAGACCGGGACATTCTGCTTGTACCAGACGTGCTGGCA   1050
                     |.||.||||||||.|||||.||||||||.||||||||.||||||||||||
BL02226___gud   1001 CGAAAATTCTTTCCGACCGCGACATTCTTCTTGTACCGGACGTGCTGGCA   1050

BSNT_03418___   1051 AGTGCCGGTGGCGTAACAGTTTCTTATTTTGAATGGGTTCAGAATAACCA   1100
                     ||.|||||.||.|||||.||.||.||||||||.|||||.||.||.|||||
BL02226___gud   1051 AGCGCCGGCGGTGTAACGGTATCCTATTTTGAGTGGGTGCAAAACAACCA   1100

BSNT_03418___   1101 AGGCTTCTACTGGAGTGAAGAAGAGGTAGAAGAAAAATTAGAAAAAATGA   1150
                     .||.||||||||||.|||||||||.||.||||||...||.||||||||||
BL02226___gud   1101 GGGATTCTACTGGACTGAAGAAGAAGTTGAAGAACGTTTGGAAAAAATGA   1150

BSNT_03418___   1151 TGGTCAAATCATTTAACAATATTTATGAAATGGCTAACAACCGAAGAATT   1200
                     ||||||||||.||.|||||.||||||||||||||..|||||||.||||||
BL02226___gud   1151 TGGTCAAATCGTTCAACAACATTTATGAAATGGCGCACAACCGCAGAATT   1200

BSNT_03418___   1201 GACATGAGGCTCGCTGCATATATGGTCGGCGTTCGCAAAATGGCTGAAGC   1250
                     |||||||||||.||.||.||||||||.|||||.|||||.|||||.|||||
BL02226___gud   1201 GACATGAGGCTTGCAGCCTATATGGTGGGCGTCCGCAAGATGGCGGAAGC   1250

BSNT_03418___   1251 TTCGCGTTTTAGAGGCTGGATATAA   1275
                     .||.||.||.||||||||||||||.
BL02226___gud   1251 ATCCCGCTTCAGAGGCTGGATATAG   1275


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