Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00478 and BL02224
See
Amino acid alignment /
Visit
BSNT_00478 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:07
# Commandline: needle
# -asequence dna-align/BSNT_00478___yccC.1.5803.seq
# -bsequence dna-align/BL02224___ansZA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00478___yccC-BL02224___ansZA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00478___yccC-BL02224___ansZA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00478___yccC
# 2: BL02224___ansZA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1341
# Identity: 588/1341 (43.8%)
# Similarity: 588/1341 (43.8%)
# Gaps: 585/1341 (43.6%)
# Score: 1104.5
#
#
#=======================================
BSNT_00478___ 1 ATGAAAAAACAACGAATGCTCGTACTTTTTACCGCACTATTGTTTGTTTT 50
BL02224___ans 0 -------------------------------------------------- 0
BSNT_00478___ 51 TACCGGATGTTCACATTCTCCTGAAACAAAAGAATCCCCGAAAGAAAAAA 100
BL02224___ans 0 -------------------------------------------------- 0
BSNT_00478___ 101 CGCAGACACAAAAAGTCTCTTCGGCTTCTGCCTCTGA--AAAAAAGGATC 148
.||| |||||||.|.|
BL02224___ans 1 ---------------------------------ATGAATAAAAAAGTAGC 17
BSNT_00478___ 149 TGCCAAACACTAGAATTTTAGCGACAGGAGGCACGATAGCTGGTGCCGAT 198
|..|| ||| |.||.|||||.|||||.|| ..||||
BL02224___ans 18 TCTCA------------TTA-CAACGGGAGGAACGATCGC--CAGCCG-- 50
BSNT_00478___ 199 CAATCGAAAACCTCAA-----CAACTGAATATAAAGCAGGTGTTGTCGGC 243
|||||||..|| |..|| |...||||| |||
BL02224___ans 51 -----GAAAACCGAAAGCGGCCGGCT-----TGCGGCAGG-------GGC 83
BSNT_00478___ 244 GTTGAATCA------CTGATCGAGGCAGTTCCAGAAATGAAGGACATTGC 287
| |||| |||| |.|..|.|||||| |||
BL02224___ans 84 G----ATCAGCGGCCCTGA-------ATTAGCCGAAATG--------TGC 114
BSNT_00478___ 288 AAACGTCAGCGGCGAG-----CAGAT---TGT-TAACGTCGG-----CAG 323
| |.|.||.|..|| ||||| ||| ||.| ||| |||
BL02224___ans 115 A---GCCTGCCGGAAGATGTACAGATCGATGTCTACC--CGGCGTTTCAG 159
BSNT_00478___ 324 C--ACAAATATTGATAATAAAA----------TATT---GCTGAAGCTGG 358
| .|||.|||..|| ||||.| |||| |||.||||
BL02224___ans 160 CTTCCAAGTATGCAT-ATAACATTTCAGCATTTATTAGAGCTCAAGC--- 205
BSNT_00478___ 359 CGAAACGCATC-AACCACTTGCTCGCTTCAGATGATG-----TA-GACGG 401
|||| |||| ||| ||..|.||||| ||.| || |||||
BL02224___ans 206 --AAAC-CATCGAAC-----GCGTGTTTCAG--GACGGCGGCTATGACGG 245
BSNT_00478___ 402 AATCGTCGTGACTCATGGAACAGATACATTGGAGGAAACCGCTTATTTTT 451
....||.||.||.|||||.||.||.||..|.||.||||||||.|||||||
BL02224___ans 246 CGCGGTTGTAACGCATGGTACGGACACGCTTGAAGAAACCGCCTATTTTT 295
BSNT_00478___ 452 TGAATCTCACCGTGAAAAG----TGATAAACCGGTTGTTATTGTC---GG 494
||.||.|.|| ||.|| |||.|..|||||.| ||||| ||
BL02224___ans 296 TGGATTTAAC----AATAGAGGATGAGAGGCCGGTCG---TTGTCACAGG 338
BSNT_00478___ 495 TTCGATGAGACCTTCCACAGCCATCA-------------GCGCTGATGGG 531
|| ||||||.|.|| ||.|.||||
BL02224___ans 339 TT-------------CACAGCGAGCACCGGAACAGCAAGGCACAGATG-- 373
BSNT_00478___ 532 CCTTCTAACCTGTACA----------ATGCAGT---GAAAG-TGGCAGGT 567
|.|.|||| ||||.|| .|.|| |.||||
BL02224___ans 374 --------CATATACAAATATCAGGCATGCCGTATATACAGCTTGCAG-- 413
BSNT_00478___ 568 GCCCCTGAGGCAAAAGGGAAAGGGACGCTTGTTGTTCTTAACGACCGGAT 617
.||.||...||||||....||.|||.||||||||.|||||||..||||
BL02224___ans 414 --TCCGGATATAAAAGGAGCCGGCACGGTTGTTGTTTTTAACGAAAGGAT 461
BSNT_00478___ 618 TGCCTCA--GCCCGATATGTCACCAAAACAAACACAACCACAACAGATAC 665
|.|.| ||.||.||.||.| |||| || |.|
BL02224___ans 462 --CTTTAACGCGCGCTACGTTA--AAAA----------------AG-TGC 490
BSNT_00478___ 666 A---TTTAAATCAGATGAAATGGGCTTTG------TCGGAACAATTGCCG 706
| ||..|||| ||.| |||.|||| |||| ||.|.|
BL02224___ans 491 ACGCTTCGAATC---TGCA--GGGTTTTGACGTATTCGG-----TTTCGG 530
BSNT_00478___ 707 ATGATATCTATT---------TTAATAATGAGATTACCCGTAAGCATACG 747
|||.| ||.||||.||.| |||.|||||
BL02224___ans 531 -------CTACTTAGGGATCATTGATAACGACA--------AAGTATACG 565
BSNT_00478___ 748 AAGGACACGGATTTCT------CGGTTTCTAATCTTGATG------AGCT 785
|||.| |.||| .||.|..|||| ||||
BL02224___ans 566 -----------TTTATCAAAAGCCGTT--AAAGCGGGATGTTCACCAGCT 602
BSNT_00478___ 786 G------------CCT-CAGGTTGACAT----------TATCT--ATGGA 810
| ||| || ||.||||| ||||| |||||
BL02224___ans 603 GCAAAGGCCGCTTCCTGCA-GTGGACATCGTCAAATGCTATCTTGATGGA 651
BSNT_00478___ 811 TACCAAAATGACGG-AAGCTACCTGTTT----GACGCTGCTGTAAAAGCC 855
||||| || |||| || ||.||.|| ||
BL02224___ans 652 ---------GACGGCAA-------GTTTATCAGA-GCCGCCGT-----CC 679
BSNT_00478___ 856 G-GAG-----CAAAGGGGATTGTATTTGCCGG-TTCTGGGAACGGGTCTT 898
| ||| |.|| |||||.||..|||..|| .|| ||||.|||
BL02224___ans 680 GCGAGGGTGTCGAA-GGGATCGTCCTTGAGGGAGTC--GGAAGGGG---- 722
BSNT_00478___ 899 TATCTGACGCAGCCGAAAAAG-GGGCGGACAGCGCAGTCAA-----AAA- 941
.|.|..||.||||||.|.| .|||.||.|.||.| ||| |||
BL02224___ans 723 --GCAGGTGCCGCCGAATATGATGGCTGATATCGAA--CAAGCTTTAAAT 768
BSNT_00478___ 942 -AGG----------CGTCA-CAGTGGTGCGCTCTAC--CCGCACGGGAAA 977
||| ||||| || |.|| .||||..||||
BL02224___ans 769 CAGGGCGTTTATATCGTCATCA----------CGACGAGCGCAGAGGAA- 807
BSNT_00478___ 978 TGGTGTCG-TCACACCAAACC-AAGACTATGCGG---------------- 1009
||.|..| |.|.|| .||| |.||||||||.|
BL02224___ans 808 -GGCGAAGTTTATAC--GACCTATGACTATGCAGGCAGCAGCTATGACCT 854
BSNT_00478___ 1010 ------AAAAGG----ACTTGCT-GGCATCGAACTCTTTA-AACCCCCAA 1047
|||||| |.|| | ||||..|| ||| .||..|.||
BL02224___ans 855 CGCGAAAAAAGGGGTCATTT--TAGGCAAGGA-----TTATGACAGCAAA 897
BSNT_00478___ 1048 AAAGCACGGATG----TTGC--TGATGCTTGC--GCTTACCAAAACAAAT 1089
|||||..|.||| |.|| |..|.||||| ||| |.||..||.
BL02224___ans 898 AAAGCGAGAATGAAACTCGCCGTCCTTCTTGCAAGCT----ATAAAGAAG 943
BSNT_00478___ 1090 GATCCTCAAAAAATCCAAGCTTAT--TTCAATGAGTATTGA 1128
| ||.||||..||| || |.|.||.||
BL02224___ans 944 G-----CATAAAAGACAA----ATTCTGCTATTAG------ 969
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.