Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05203 and BL02216
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:20
# Commandline: needle
# -asequence dna-align/BSNT_05203___sacB.1.5803.seq
# -bsequence dna-align/BL02216___sacB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05203___sacB-BL02216___sacB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05203___sacB-BL02216___sacB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05203___sacB
# 2: BL02216___sacB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1489
# Identity: 1089/1489 (73.1%)
# Similarity: 1089/1489 (73.1%)
# Gaps: 107/1489 ( 7.2%)
# Score: 3925.0
#
#
#=======================================
BSNT_05203___ 1 ATGAACATCAAAAAGTTTGCAAAACAAGCAACAGTATTGACCTTTACTAC 50
||||||||||||||..||||.|||.||||..|||..||.|||.||.||.|
BL02216___sac 1 ATGAACATCAAAAACATTGCTAAAAAAGCGTCAGCCTTAACCGTTGCTGC 50
BSNT_05203___ 51 TGCACTGCTGGCAGGAGGCGCAACTCAAGCGTTTGCGAAAGAAACAAACC 100
.|||||||||||.|||||.||..|.|||.|.|||||.||||||||
BL02216___sac 51 GGCACTGCTGGCCGGAGGTGCGCCGCAAACCTTTGCAAAAGAAAC----- 95
BSNT_05203___ 101 AAAAGCCA----TATAAGGAAACGTACGGCATTTCCCATATTACACGCCA 146
.|| ||.|||.|||..|||||..||||.|||||.|||.|.||
BL02216___sac 96 -----GCAGGATTACAAGAAAAGCTACGGATTTTCTCATATCACAAGACA 140
BSNT_05203___ 147 TGACATGCTGCAAATCCCTGAACAGCAAAAAAATGAAAAATATCAAGTGC 196
||||||||||.||||.||.||.||||||||.|..|||.|||.|.||||.|
BL02216___sac 141 TGACATGCTGAAAATTCCCGAGCAGCAAAAGAGCGAACAATTTAAAGTTC 190
BSNT_05203___ 197 CTGAATTCGATCCGTCCACAATTAAAAATATCTCTTCTGCAAAAGG---- 242
||.|||||||||||...|||||.|||||.|||.|||||||||||||
BL02216___sac 191 CTCAATTCGATCCGAAAACAATCAAAAACATCCCTTCTGCAAAAGGGTAT 240
BSNT_05203___ 243 --------------CCTG---------GACGTTTGGGACAGCTGGCCATT 269
.||| |||||.||||||||||||||..|
BL02216___sac 241 AACAAAAATGGAGAGCTGATCGATTTAGACGTATGGGACAGCTGGCCGCT 290
BSNT_05203___ 270 ACAAAACGCTGATGGCACAGTCGCAAACTATCACGGCTACCACATCGTCT 319
.|||||.||.||.||.||.||.||.|..||.|||||||||.|..|.||.|
BL02216___sac 291 GCAAAATGCCGACGGGACGGTTGCTACATACCACGGCTACAATCTTGTTT 340
BSNT_05203___ 320 TTGCATTAGCCGGAGATCCTAAAAATGCGGATGACACATCGATTTACATG 369
|.||..|.||.||.|||||.|||.|.|..|||||||||||.||.||..||
BL02216___sac 341 TCGCGCTGGCGGGCGATCCGAAAGACGTCGATGACACATCCATCTATTTG 390
BSNT_05203___ 370 TTCTATCAAAAAGTCGGCGAAACTTCTATTGACAGCTGGAAAAACGCTGG 419
|||||||||||....||||||||||||||.|||||||||||||||||.||
BL02216___sac 391 TTCTATCAAAAGAAAGGCGAAACTTCTATCGACAGCTGGAAAAACGCCGG 440
BSNT_05203___ 420 CCGCGTCTTTAAAGACAGCGACAAATTCGATGCAAATGATTC-TATCCTA 468
|.|.||.||||||||||||||||||||.|.|.||.|.|||.| || |||.
BL02216___sac 441 CAGAGTGTTTAAAGACAGCGACAAATTTGTTCCAGACGATCCGTA-CCTC 489
BSNT_05203___ 469 AAAGACCAAACGCAAGAATGGTCAGGTTCAGCCACATTTACATCTGACGG 518
|||.|.|||||.||.||||||||||||||.|||||..|.|||...|||||
BL02216___sac 490 AAACATCAAACACAGGAATGGTCAGGTTCTGCCACGCTGACAAAAGACGG 539
BSNT_05203___ 519 AAAAATCCGTTTATTCTATACTGATTTCTCCGGTAAACATTACGGCAAAC 568
||||.||||..|.||.||.||.|.|||.|||||.|..||.||||||||.|
BL02216___sac 540 AAAAGTCCGACTGTTTTACACAGCTTTTTCCGGCACGCAATACGGCAAGC 589
BSNT_05203___ 569 AAACACTGACAACTGCACAGGTTAA---CGTATCAGC----ATCAGACA- 610
|.||.||||||||.||.|||||.|| | |.||||| .||.||||
BL02216___sac 590 AGACGCTGACAACAGCTCAGGTCAATTTC-TCTCAGCCGGATTCGGACAC 638
BSNT_05203___ 611 GCTCTTTGAACATCAACGGTGTAGAGGATTATAAATCAATCTTTGACGG- 659
|||| ||.||..||||||||||.|||.|||||||..||||||||||
BL02216___sac 639 GCTC----AAAATTGACGGTGTAGAAGATCATAAATCGGTCTTTGACGGC 684
BSNT_05203___ 660 --TGACGGCAAAACG---TATCAAAATGTACAGCAGTTCATCGATGAAGG 704
.|||||| ||| ||.|||||.||.|||||.|||||.||.|||||
BL02216___sac 685 GCCGACGGC---ACGGTATACCAAAACGTTCAGCAATTCATTGACGAAGG 731
BSNT_05203___ 705 CAACTACAGCTCAGGCGACAACCATACGCTGAGAGATCCTCACTACGTAG 754
.|||||||||||.|||||||||||||||.|||||||.||.||.||.||.|
BL02216___sac 732 AAACTACAGCTCCGGCGACAACCATACGATGAGAGACCCGCATTATGTGG 781
BSNT_05203___ 755 AAGATAAAGGCCACAAATACTTAGTATTTGAAGCAAACACTGGAACTGAA 804
||||....|||||.|||||..|.|||||||||||.||.||.|||||..||
BL02216___sac 782 AAGACCGCGGCCATAAATATCTCGTATTTGAAGCCAATACGGGAACAAAA 831
BSNT_05203___ 805 GATGGCTACCAAGGCGAAGAATCTTTATTTAACAAAGCATACTA---TGG 851
...|||||||||||.|||||.||..||||.||||.|||.||||| .||
BL02216___sac 832 ACCGGCTACCAAGGAGAAGACTCCCTATTCAACAGAGCCTACTACGGGGG 881
BSNT_05203___ 852 CA-AAAGCACATCGTTCTTCCGTCAAGAAAGTCA-AAAACTTCTGCAA-- 897
|| .|||.| ||||||.....||||||| || .||.||.||||||
BL02216___sac 882 CAGCAAGAA----GTTCTTTAAAGAAGAAAG-CAGCAAGCTGCTGCAAGG 926
BSNT_05203___ 898 AGCGATAAAAAACGCACG----GCTGAGTTAGCAAACGGCGCCCTCGGCA 943
.|||| |.||||.|.||| |||| ||.||||||||.|||||.|
BL02216___sac 927 TGCGA-ACAAAAAGAACGCTTCGCTG-----GCTAACGGCGCTCTCGGAA 970
BSNT_05203___ 944 TGATTGAGCTAAACGATGACTACACACTGAAAAAAGTGATGAAACCGCTG 993
|.||.||..||||..|.||.||.||||||||||||||.|||||.||..||
BL02216___sac 971 TCATCGAATTAAATAACGATTATACACTGAAAAAAGTCATGAAGCCTTTG 1020
BSNT_05203___ 994 ATTGCATCTAACACAGTAACAGATGAAATTGAACGCGCGAACGTCTTTAA 1043
||.||.||.||.||.||.|||||||||||.|||||.||.|||.||||.||
BL02216___sac 1021 ATCGCCTCCAATACGGTGACAGATGAAATCGAACGGGCCAACCTCTTCAA 1070
BSNT_05203___ 1044 AATGAACGGCAAATGGTACCTGTTCACTGACTCCCGCGGATCAAAAATGA 1093
||||||.||.||||||||.||||||||.||.||..|.|||||||||||||
BL02216___sac 1071 AATGAATGGAAAATGGTATCTGTTCACAGATTCAAGAGGATCAAAAATGA 1120
BSNT_05203___ 1094 CGATTGACGGCATTACG--TCTAACGATATTTACATGCTTGGTTATGTTT 1141
|.||||||||||| || ||.||.||.|||||.|||||.||.|||||.|
BL02216___sac 1121 CAATTGACGGCAT--CGGTTCAAAAGACATTTATATGCTCGGCTATGTAT 1168
BSNT_05203___ 1142 CTAATTCTTTAACTGGCCCATACAAGCCGCTGAACAAAACTGGCCTTGTG 1191
|...|||.|||||.||.||||.||||||..|.||||||.|.||.|||||.
BL02216___sac 1169 CAGGTTCATTAACCGGACCATTCAAGCCTTTAAACAAATCCGGACTTGTT 1218
BSNT_05203___ 1192 TTAAAAATGGATCTTGATCCTAACGATGTAACCTTTACTTACTCACACTT 1241
||..|.|||||.|..|||...||.||..|.||.||||||||.||||||||
BL02216___sac 1219 TTGCATATGGACCAGGATTACAATGACATCACGTTTACTTATTCACACTT 1268
BSNT_05203___ 1242 CGCTGTACCTCAAGCGAAAGGAAACAATGTCGTGATTACAAGCTATATGA 1291
.||.|||||.||....|||||..||.|.|||||.|||||||||||.||.|
BL02216___sac 1269 TGCCGTACCGCAGAAAAAAGGCGACGAAGTCGTCATTACAAGCTACATCA 1318
BSNT_05203___ 1292 CAAACAGAGGG--TTCTACGCAGACAAACAATCA----ACGTTTGCGCCA 1335
||||||||||| |||.| ||.|.| |||| ||||||||.|||
BL02216___sac 1319 CAAACAGAGGGATTTCGA-----ACGAGC-ATCACGCCACGTTTGCACCA 1362
BSNT_05203___ 1336 AGCTTCCTGCTGAACATCAAAGG--CAAGAAAACATCTGTTGTCAAAGAC 1383
|||||..|||||||.|||||||| || ||||||||.|||||||||.||
BL02216___sac 1363 AGCTTTTTGCTGAAGATCAAAGGATCA--AAAACATCCGTTGTCAAAAAC 1410
BSNT_05203___ 1384 AGCATCCTTGAACAAGGACAATTAACAGTTAACAAATAA 1422
||||||||||||||.||||||.||||.||.|||||||||
BL02216___sac 1411 AGCATCCTTGAACAGGGACAACTAACGGTAAACAAATAA 1449
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