Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00781 and BL02213

See Amino acid alignment / Visit BSNT_00781 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence dna-align/BSNT_00781___ydbP.1.5803.seq
#    -bsequence dna-align/BL02213___ydbP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00781___ydbP-BL02213___ydbP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00781___ydbP-BL02213___ydbP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00781___ydbP
# 2: BL02213___ydbP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 321
# Identity:     269/321 (83.8%)
# Similarity:   269/321 (83.8%)
# Gaps:           0/321 ( 0.0%)
# Score: 1137.0
# 
#
#=======================================

BSNT_00781___      1 ATGAAAAAAATCACAACAAACGAACAATTTAATGAACTGATTCAATCTGA     50
                     .|||||||||||||||||.|.|..||||||||||||.||||.|||||.||
BL02213___ydb      1 TTGAAAAAAATCACAACAGAAGCGCAATTTAATGAATTGATCCAATCCGA     50

BSNT_00781___     51 TAAAGAAATCATTGTAAAGTTTTATGCTGATTGGTGCCCAGACTGCACAC    100
                     ||||||||||||.||.||.|||||.|||||.||||||||.||||||||||
BL02213___ydb     51 TAAAGAAATCATCGTCAAATTTTACGCTGACTGGTGCCCGGACTGCACAC    100

BSNT_00781___    101 GCATGAATATGTTCATCGGCGATATTTTGGAAGAGTACAACCAAAACGAT    150
                     |||||||.|||||||||||.||.|||.|.||.|..||..|..||||.||.
BL02213___ydb    101 GCATGAACATGTTCATCGGAGACATTCTTGAGGCTTATCAGGAAAATGAC    150

BSNT_00781___    151 TGGTATGAGCTGAATAAGGACGAGCTTCCTGACCTGGCTGAAAAATACCA    200
                     |||||||||||||||||.|||||.||||||||.||.||.||.||.|||||
BL02213___ydb    151 TGGTATGAGCTGAATAAAGACGACCTTCCTGAACTTGCCGACAAGTACCA    200

BSNT_00781___    201 AGTAATGGGCATTCCCAGCCTGCTTATTTTCAAGAACGGTGAAAAAACAG    250
                     .||.|||||||||||.||||||.|.||||||||.|||||.||||||||.|
BL02213___ydb    201 GGTCATGGGCATTCCAAGCCTGTTGATTTTCAAAAACGGCGAAAAAACGG    250

BSNT_00781___    251 CTCACCTTCACAGCGCCAATGCCAAAACGCCTGAAGAAGTGACTGAATTT    300
                     ..||||||||||||||.|||||||||||||||||||||||||.||||||.
BL02213___ydb    251 GACACCTTCACAGCGCAAATGCCAAAACGCCTGAAGAAGTGAATGAATTC    300

BSNT_00781___    301 TTATCTGAACATATAAGCTAA    321
                     .|..||||||||||.||||||
BL02213___ydb    301 CTGGCTGAACATATTAGCTAA    321


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