Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00778 and BL02212

See Amino acid alignment / Visit BSNT_00778 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:24
# Commandline: needle
#    -asequence dna-align/BSNT_00778.1.5803.seq
#    -bsequence dna-align/BL02212___ydbN.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00778-BL02212___ydbN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00778-BL02212___ydbN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00778
# 2: BL02212___ydbN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:     102/166 (61.4%)
# Similarity:   102/166 (61.4%)
# Gaps:          29/166 (17.5%)
# Score: 279.5
# 
#
#=======================================

BSNT_00778         1 ATGCCGAAGCGTAAAGTGAAAACTTACCAACAGCTGATTCAGGAA---AA     47
                     |||.|.||.||.||..|.|||||.|..||.|||||..|..|.|||   ||
BL02212___ydb      1 ATGTCAAAACGGAAGATTAAAACCTTTCATCAGCTTGTCGAAGAATATAA     50

BSNT_00778        48 CAAAGAGGCGATTATGGGCAA----TCCAAAGCTGATGAACGTTATTTAT     93
                     .|||||      .||.|.|||    .|.|||| ..|||.|.||.||||||
BL02212___ydb     51 AAAAGA------AATCGCCAAGAACCCGAAAG-AAATGGAAGTCATTTAT     93

BSNT_00778        94 GACAGGATCGACCGCAAGCATCAAAAA------------AATCTGCAAGA    131
                     ||||.|||||||||||..|| |.|.||            .|| |.|||.|
BL02212___ydb     94 GACAAGATCGACCGCAGACA-CGAGAACCGCCTTTTGGCCAT-TTCAAAA    141

BSNT_00778       132 GCAAAACAATACATAA    147
                     ||||||||| ||||||
BL02212___ydb    142 GCAAAACAA-ACATAA    156


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