Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00778 and BL02212
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence dna-align/BSNT_00778.1.5803.seq
# -bsequence dna-align/BL02212___ydbN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00778-BL02212___ydbN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00778-BL02212___ydbN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00778
# 2: BL02212___ydbN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity: 102/166 (61.4%)
# Similarity: 102/166 (61.4%)
# Gaps: 29/166 (17.5%)
# Score: 279.5
#
#
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BSNT_00778 1 ATGCCGAAGCGTAAAGTGAAAACTTACCAACAGCTGATTCAGGAA---AA 47
|||.|.||.||.||..|.|||||.|..||.|||||..|..|.||| ||
BL02212___ydb 1 ATGTCAAAACGGAAGATTAAAACCTTTCATCAGCTTGTCGAAGAATATAA 50
BSNT_00778 48 CAAAGAGGCGATTATGGGCAA----TCCAAAGCTGATGAACGTTATTTAT 93
.||||| .||.|.||| .|.|||| ..|||.|.||.||||||
BL02212___ydb 51 AAAAGA------AATCGCCAAGAACCCGAAAG-AAATGGAAGTCATTTAT 93
BSNT_00778 94 GACAGGATCGACCGCAAGCATCAAAAA------------AATCTGCAAGA 131
||||.|||||||||||..|| |.|.|| .|| |.|||.|
BL02212___ydb 94 GACAAGATCGACCGCAGACA-CGAGAACCGCCTTTTGGCCAT-TTCAAAA 141
BSNT_00778 132 GCAAAACAATACATAA 147
||||||||| ||||||
BL02212___ydb 142 GCAAAACAA-ACATAA 156
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