Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00805 and BL02209
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:26
# Commandline: needle
# -asequence dna-align/BSNT_00805___rsbX.1.5803.seq
# -bsequence dna-align/BL02209___rsbX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00805___rsbX-BL02209___rsbX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00805___rsbX-BL02209___rsbX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00805___rsbX
# 2: BL02209___rsbX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity: 406/639 (63.5%)
# Similarity: 406/639 (63.5%)
# Gaps: 78/639 (12.2%)
# Score: 1143.0
#
#
#=======================================
BSNT_00805___ 1 ATGATCCAGGTTGAA--GA---AAACGAGCATATTCAAACTCTAGTATAT 45
||||| |||.| || .||.||.||.||.|||.|.||.||.|||
BL02209___rsb 1 ATGAT-----TTGGACTGAGTCGAATGAACACATGCAAGCGCTTGTTTAT 45
BSNT_00805___ 46 CAACTGAATAAAGAAGGGAAATCGATTTGCGGTGACAGCTTTTTTAT--- 92
||.||...|||||||||.|||.|..|.||||||||||| |||||||
BL02209___rsb 46 CAGCTTCCTAAAGAAGGAAAAGCCGTCTGCGGTGACAG--TTTTTATTTC 93
BSNT_00805___ 93 -----GAAAGCTGATGATAA----GGAGTTAATTTGCGCGGTTGCTGACG 133
|| ||||.|| || || |.|||||..|.|||||||
BL02209___rsb 94 CATGCGA---CTGACGA-AACCATGG------TGTGCGCACTGGCTGACG 133
BSNT_00805___ 134 GACTGGGAAGTGGATCACTTGCTAACGAATCCTCTGCAGCCATCAAAGAC 183
|.||.||.||.||..|..|.||...||||||||||.|.|.|||||..||.
BL02209___rsb 134 GGCTTGGCAGCGGTGCGTTGGCACGCGAATCCTCTTCGGTCATCAGCGAA 183
BSNT_00805___ 184 TTAGTGGAAAACTATGCGAG--------TGAAGACGTAGAAAGCATTATC 225
.|.||.||| ||| ||||||.||.||||||.|.||.
BL02209___rsb 184 GTTGTCGAA--------GAGCACGGCCATGAAGATGTCGAAAGCTTGATG 225
BSNT_00805___ 226 GAACGCTGTAATCAGGCGATGAAAAACAAAAGAGGCGCTACAGCATCTAT 275
|||||.||.|||||.|||.|||||.|.||..|.||.||.||.|..||.||
BL02209___rsb 226 GAACGGTGCAATCAAGCGCTGAAACATAAGCGCGGTGCGACCGTTTCAAT 275
BSNT_00805___ 276 CCTGAAAATCAATTTT-GAGCAAAGGCAGTTTACGTACTGCTCTGTCGGA 324
..|.|||.||.||||| ||.| ||||..|.|..|.|||.|||||||.||.
BL02209___rsb 276 TTTAAAAGTCGATTTTCGAAC-AAGGACGATCGCTTACAGCTCTGTAGGC 324
BSNT_00805___ 325 AATGTACGGTTTATTCTGCATTCCCCGTCTGGTGAAAGCTTTTAT----C 370
|||.|.||.|||||..|..|..|.||.|| ||..||| |.||| |
BL02209___rsb 325 AATATTCGCTTTATCTTATACGCTCCTTC-GGACAAA---TATATCCACC 370
BSNT_00805___ 371 CTCTGCCGATTTCGGGCTATTTATCAGGCAAGCCGCAAAAATACAAAACG 420
||||.||..|..||||.||..|.||.||.||.|||||||.|||||||||.
BL02209___rsb 371 CTCTCCCTGTGACGGGATACATGTCGGGAAAACCGCAAACATACAAAACA 420
BSNT_00805___ 421 CACACCGCCACCTATGAAAAGGGTTCAAAGTTCATTATACATACAGATGG 470
..||||...||.||||||||.||.||||..|||||.||..||.||||.||
BL02209___rsb 421 TTCACCTATACGTATGAAAAAGGATCAAGATTCATCATTTATTCAGACGG 470
BSNT_00805___ 471 ACTCAACGTACCTGATATCCGCTCCCATTTAAAAAAAGGCCA---ATCGG 517
..|..|.|||||.|...||||..|..||||||||.|...||| |.||
BL02209___rsb 471 TTTGGAAGTACCCGCCCTCCGGACTTATTTAAAACAGCACCATACACCG- 519
BSNT_00805___ 518 TAGAAGAAATATCGAATTCGC-TGAAGATGT-ATACGACATCGA----GA 561
|.|||.|||||||||..|| |||| | |||| ||| ||| ||
BL02209___rsb 520 --GGAGATATATCGAATCAGCTTGAA----TCATAC-ACA-CGAATGGGA 561
BSNT_00805___ 562 AAAGATGACCTGACCTATATTCTCGGACAGCTGTCCTAG 600
|||||.||.||.||||||||..|.||||||||.|..||.
BL02209___rsb 562 AAAGACGATCTCACCTATATCATTGGACAGCTTTTTTAA 600
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