Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00805 and BL02209

See Amino acid alignment / Visit BSNT_00805 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:26
# Commandline: needle
#    -asequence dna-align/BSNT_00805___rsbX.1.5803.seq
#    -bsequence dna-align/BL02209___rsbX.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00805___rsbX-BL02209___rsbX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00805___rsbX-BL02209___rsbX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00805___rsbX
# 2: BL02209___rsbX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 639
# Identity:     406/639 (63.5%)
# Similarity:   406/639 (63.5%)
# Gaps:          78/639 (12.2%)
# Score: 1143.0
# 
#
#=======================================

BSNT_00805___      1 ATGATCCAGGTTGAA--GA---AAACGAGCATATTCAAACTCTAGTATAT     45
                     |||||     |||.|  ||   .||.||.||.||.|||.|.||.||.|||
BL02209___rsb      1 ATGAT-----TTGGACTGAGTCGAATGAACACATGCAAGCGCTTGTTTAT     45

BSNT_00805___     46 CAACTGAATAAAGAAGGGAAATCGATTTGCGGTGACAGCTTTTTTAT---     92
                     ||.||...|||||||||.|||.|..|.|||||||||||  |||||||   
BL02209___rsb     46 CAGCTTCCTAAAGAAGGAAAAGCCGTCTGCGGTGACAG--TTTTTATTTC     93

BSNT_00805___     93 -----GAAAGCTGATGATAA----GGAGTTAATTTGCGCGGTTGCTGACG    133
                          ||   ||||.|| ||    ||      |.|||||..|.|||||||
BL02209___rsb     94 CATGCGA---CTGACGA-AACCATGG------TGTGCGCACTGGCTGACG    133

BSNT_00805___    134 GACTGGGAAGTGGATCACTTGCTAACGAATCCTCTGCAGCCATCAAAGAC    183
                     |.||.||.||.||..|..|.||...||||||||||.|.|.|||||..||.
BL02209___rsb    134 GGCTTGGCAGCGGTGCGTTGGCACGCGAATCCTCTTCGGTCATCAGCGAA    183

BSNT_00805___    184 TTAGTGGAAAACTATGCGAG--------TGAAGACGTAGAAAGCATTATC    225
                     .|.||.|||        |||        ||||||.||.||||||.|.||.
BL02209___rsb    184 GTTGTCGAA--------GAGCACGGCCATGAAGATGTCGAAAGCTTGATG    225

BSNT_00805___    226 GAACGCTGTAATCAGGCGATGAAAAACAAAAGAGGCGCTACAGCATCTAT    275
                     |||||.||.|||||.|||.|||||.|.||..|.||.||.||.|..||.||
BL02209___rsb    226 GAACGGTGCAATCAAGCGCTGAAACATAAGCGCGGTGCGACCGTTTCAAT    275

BSNT_00805___    276 CCTGAAAATCAATTTT-GAGCAAAGGCAGTTTACGTACTGCTCTGTCGGA    324
                     ..|.|||.||.||||| ||.| ||||..|.|..|.|||.|||||||.||.
BL02209___rsb    276 TTTAAAAGTCGATTTTCGAAC-AAGGACGATCGCTTACAGCTCTGTAGGC    324

BSNT_00805___    325 AATGTACGGTTTATTCTGCATTCCCCGTCTGGTGAAAGCTTTTAT----C    370
                     |||.|.||.|||||..|..|..|.||.|| ||..|||   |.|||    |
BL02209___rsb    325 AATATTCGCTTTATCTTATACGCTCCTTC-GGACAAA---TATATCCACC    370

BSNT_00805___    371 CTCTGCCGATTTCGGGCTATTTATCAGGCAAGCCGCAAAAATACAAAACG    420
                     ||||.||..|..||||.||..|.||.||.||.|||||||.|||||||||.
BL02209___rsb    371 CTCTCCCTGTGACGGGATACATGTCGGGAAAACCGCAAACATACAAAACA    420

BSNT_00805___    421 CACACCGCCACCTATGAAAAGGGTTCAAAGTTCATTATACATACAGATGG    470
                     ..||||...||.||||||||.||.||||..|||||.||..||.||||.||
BL02209___rsb    421 TTCACCTATACGTATGAAAAAGGATCAAGATTCATCATTTATTCAGACGG    470

BSNT_00805___    471 ACTCAACGTACCTGATATCCGCTCCCATTTAAAAAAAGGCCA---ATCGG    517
                     ..|..|.|||||.|...||||..|..||||||||.|...|||   |.|| 
BL02209___rsb    471 TTTGGAAGTACCCGCCCTCCGGACTTATTTAAAACAGCACCATACACCG-    519

BSNT_00805___    518 TAGAAGAAATATCGAATTCGC-TGAAGATGT-ATACGACATCGA----GA    561
                       |.|||.|||||||||..|| ||||    | |||| ||| |||    ||
BL02209___rsb    520 --GGAGATATATCGAATCAGCTTGAA----TCATAC-ACA-CGAATGGGA    561

BSNT_00805___    562 AAAGATGACCTGACCTATATTCTCGGACAGCTGTCCTAG    600
                     |||||.||.||.||||||||..|.||||||||.|..||.
BL02209___rsb    562 AAAGACGATCTCACCTATATCATTGGACAGCTTTTTTAA    600


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