Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00788 and BL02198
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_00788___ydbS.1.5803.seq
# -bsequence dna-align/BL02198___ydbS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00788___ydbS-BL02198___ydbS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00788___ydbS-BL02198___ydbS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00788___ydbS
# 2: BL02198___ydbS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 514
# Identity: 354/514 (68.9%)
# Similarity: 354/514 (68.9%)
# Gaps: 68/514 (13.2%)
# Score: 1159.0
#
#
#=======================================
BSNT_00788___ 1 TTGAGAGAGC-AGCCAAAAAACCAAATCAGTCCAGACGG-ATTAAAGGTT 48
|||||| ||| ||||.|||||.||||||||.|..||.|| .||||| ||.
BL02198___ydb 1 TTGAGA-AGCGAGCCGAAAAATCAAATCAGCCGTGATGGCGTTAAA-GTC 48
BSNT_00788___ 49 TGGCGACT-----------TCAAGAGATCATCATATCCGCTGTT----TG 83
|||.||.| ||| |||||| || ||| ||
BL02198___ydb 49 TGGAGAATCACGGCTTGTATCA------CATCAT-TC----GTTTTAATG 87
BSNT_00788___ 84 CTTGCTTATTG---------TCATTGCAGTTGCAGTGTTAAGCTATTATT 124
||.|| || |.|||||.|..|..|||.|| |
BL02198___ydb 88 CTGGC----TGCAGCAGGCCTGATTGCCGCCGGGGTGATA---------T 124
BSNT_00788___ 125 TTCATTGGCC-GTACTGGATCAGCGGCGTGCTCGGC-GCAGTTTGGCTGC 172
||.|.||||| ||| ||||||.||....|| ||.|| ||.|||||||||
BL02198___ydb 125 TTAAGTGGCCGGTA-TGGATCGGCATTTTG-TCAGCGGCCGTTTGGCTG- 171
BSNT_00788___ 173 TGGGA--TCGATTGTGACGGTCTTTATC---ATTCCGAAGGTCCGTCATA 217
|||| ||..||||.| ||.||||| ||||||||..||||.||.|
BL02198___ydb 172 -GGGATTTCATTTGTCA---TCATTATCATGATTCCGAATATCCGCCACA 217
BSNT_00788___ 218 AGGTGTGGCGATATGAAGTCCATGAACATGAAATAGATATTCAGTCA-GG 266
..||.|||||.||.|||||||||||..|.|||||.||||||||| || ||
BL02198___ydb 218 GAGTCTGGCGCTACGAAGTCCATGAGAACGAAATTGATATTCAG-CACGG 266
BSNT_00788___ 267 TATTTTTGTGGTGACACGTGTGATTGTTCCGATGGTCAGAGTTCAGCACG 316
.||.|||||||||||.||.|||||.|||||||||||||||||.|||||.|
BL02198___ydb 267 CATCTTTGTGGTGACCCGCGTGATCGTTCCGATGGTCAGAGTCCAGCATG 316
BSNT_00788___ 317 TCGATACGTCACAAGGGCCATTATTAAAAAAATACAACCTGGCAACGGTG 366
|.|||||.||.||.||.||..|..|.|.||||||.||.||.||..|.|||
BL02198___ydb 317 TTGATACATCGCAGGGCCCCATCCTCAGAAAATATAATCTCGCCTCCGTG 366
BSNT_00788___ 367 AAAATTTCCACGGCCGCGACCGTTCATTCGATCCCCGCTTTAGAGATGGA 416
.|||||||.||.||.|||||....|||||.||.||||||||.||..|.||
BL02198___ydb 367 CAAATTTCAACAGCAGCGACGACCCATTCCATTCCCGCTTTGGATGTTGA 416
BSNT_00788___ 417 GGAAGCGGATCGGCTGAGAGACTCCATTTCCCGTCTGGCGAGGGTGACTG 466
.||.||.||||.|||.|||||.|||||||||.|.|||||.||||||||||
BL02198___ydb 417 AGAGGCCGATCAGCTCAGAGATTCCATTTCCAGGCTGGCAAGGGTGACTG 466
BSNT_00788___ 467 ACGATGATGTCTGA 480
|.||||||||||||
BL02198___ydb 467 AAGATGATGTCTGA 480
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