Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00784 and BL02194
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:25
# Commandline: needle
# -asequence dna-align/BSNT_00784___murF.1.5803.seq
# -bsequence dna-align/BL02194___murF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00784___murF-BL02194___murF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00784___murF-BL02194___murF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00784___murF
# 2: BL02194___murF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1553
# Identity: 949/1553 (61.1%)
# Similarity: 949/1553 (61.1%)
# Gaps: 289/1553 (18.6%)
# Score: 2873.5
#
#
#=======================================
BSNT_00784___ 1 ATGAAGAAGGACACTGCCGGTAAAAGGGCAGTGTTTTTTCCCGTATATAC 50
BL02194___mur 0 -------------------------------------------------- 0
BSNT_00784___ 51 AAAAGAAAGAGAGGGACCTTACTTGATTAAGCGAACAGTAAAAAACATTG 100
.||||.|...||||.||||||.|.||||
BL02194___mur 1 ----------------------ATGATAACAAGAACGGTAAAAGAAATTG 28
BSNT_00784___ 101 CCGAAATGGTTAAAGGCACACTAACAAATCCGCAA---TATGAA---CAA 144
|.||||||....|||||....|.||.||| .|| |.|||| |
BL02194___mur 29 CTGAAATGTCGGAAGGCGTTTTGACGAAT---GAAGCTTTTGAAGGGC-- 73
BSNT_00784___ 145 ACAGTCATTCAT----GGAGTGGCAACCGATACAAGAAAACTGGAACAAC 190
||| |||| ||.||..||||||||.|.||||||||||...||.
BL02194___mur 74 ---GTC--TCATCAAAGGCGTCTCAACCGATTCGAGAAAACTGGCGAAAG 118
BSNT_00784___ 191 ATCAGCTCTTCATTCCG-TTGAAAGGGGAACGTTTTGACGGCCACACTTT 239
..||.||.||.|||||| ||| .|||.||.||.||..||||.|||..|||
BL02194___mur 119 GCCAACTGTTTATTCCGCTTG-CAGGCGAGCGGTTCAACGGACACGTTTT 167
BSNT_00784___ 240 TGTGGAGCAGGCTTTTGAAGCTGGTGTAGCGGCTGTTCTTTGGGATCG-- 287
||..||||||||||||.|.|..||.||.|||||.||.||.|||.|.||
BL02194___mur 168 TGCAGAGCAGGCTTTTCAGGAAGGCGTTGCGGCCGTGCTGTGGAACCGAA 217
BSNT_00784___ 288 GTCAGTACCAAATCCGCCCGA---GAATCACGCC-GTCATTTTAGTGGAT 333
|| |.|||.|||||.||.|| ||| ||| |||||||||||.||.
BL02194___mur 218 GT--GAACCGAATCCTCCGGAAGGGAA----GCCGGTCATTTTAGTTGAC 261
BSNT_00784___ 334 GATACCCTTACTGCACTTCAGCAGCTTGCAAAAGCCTATTTGCAGG---- 379
|||||.||....||.||.|||.|||||||.||.||.|| ||||
BL02194___mur 262 GATACGCTGGAAGCGCTGCAGAAGCTTGCGAAGGCATA----CAGGAATC 307
BSNT_00784___ 380 AGCTTGGCACGCGT----GTCATCGGAGTAACCGGAAGCAATGGCAAAAC 425
||||.| .||| |||.||||.||.|||||....||.||.|||||
BL02194___mur 308 AGCTGG----ACGTAAAAGTCGTCGGCGTGACCGGTTCAAACGGAAAAAC 353
BSNT_00784___ 426 GACAACAAAAGATATGATTCACGCCGTACTGGGGACCCAGTACCGCGTCC 475
|||.||||||||.||||||||.||.||..||||.||..||||....||.|
BL02194___mur 354 GACGACAAAAGACATGATTCATGCTGTTTTGGGCACTGAGTATAAAGTGC 403
BSNT_00784___ 476 ACAAAACTGGAGGAAACTTCAATAATCATATCGGTTTGCCGCTGACAGTT 525
|.||.||.|.||||||||.||||||.||||||||..||||.|||||..||
BL02194___mur 404 ATAAGACAGAAGGAAACTACAATAACCATATCGGCCTGCCCCTGACGATT 453
BSNT_00784___ 526 TTAGCGATGCCTGAAAATACGGAGATCGCCGTATTGGAGATGGGAATGAG 575
.|.||||||||.|||.|.||.||..|||||.|.|||||.|||||.|||||
BL02194___mur 454 CTGGCGATGCCCGAAGACACAGAAGTCGCCATTTTGGAAATGGGGATGAG 503
BSNT_00784___ 576 CGCCAAAGGAGAAATTGA----------CCTCTTGAGCCGCCTGGCAAAC 615
|||||||||||||||.|| |.|||.|.||.||||
BL02194___mur 504 CGCCAAAGGAGAAATCGATTTTCTCACTCGTCTGGCGCGGCCT------- 546
BSNT_00784___ 616 CCGGATGCGGCAGTGATTACGAATATCGGCGAATCGCATATGCAAGACCT 665
|||...|||||.|||||.||.||.||.|||||.||..|.|..||.||
BL02194___mur 547 ---GATATTGCAGTCATTACAAACATTGGTGAATCACACCTCCTTGAACT 593
BSNT_00784___ 666 TGGCTCTAGAGAGGGCATCGCGGAGGCGAAGCTTGAAATCATTAACGGGC 715
.||.||.|||||.||.||.||.|||||||||||.|||||..|.||.||||
BL02194___mur 594 CGGATCAAGAGAAGGAATTGCAGAGGCGAAGCTCGAAATTGTCAATGGGC 643
BSNT_00784___ 716 TT---AAAGAAG----ACGGAGTGTTGATTTATATCGGGGACGAACCGCT 758
|| ||||||| || |.||||||.||||.||.||||||||
BL02194___mur 644 TTTCAAAAGAAGGCACAC-------TCATTTATGTCGGAGATGAACCGCT 686
BSNT_00784___ 759 TCTTCA---AAATGC--ATACAGCTGCCAGACGA---AAACGTACGGGAC 800
.| ||| |||.|| |..||||.|||..|||| ||| |||
BL02194___mur 687 GC-TCACCGAAAGGCTGAACCAGCCGCCTTACGATACAAA-------GAC 728
BSNT_00784___ 801 G---GGAG------CGCATAATGATTATCAGCTTCAGGATGTCAGCCAGA 841
| |||| ||..|...||||||||||||.|||||.|.|..||||
BL02194___mur 729 GTTTGGAGAGGATCCGGCTTTCGATTATCAGCTTGAGGATATGACACAGA 778
BSNT_00784___ 842 GTGAGGAAGGAAC-CCATTTTACAATCAAAGGGATAGAAAACACGTTTTT 890
.|||.||.||.|| .||||...| .|.|.|||.||.||||||..|||.||
BL02194___mur 779 CTGAAGAGGGGACGGCATTCCGC-GTGAGAGGAATCGAAAACGGGTTCTT 827
BSNT_00784___ 891 TATTCCGATACTCGGCAAGCACAATGTGATGAACGCCATGGCAGCGATTG 940
.||.|||.|.||.||.|||||.|||||||..|||||..|.||.|||||||
BL02194___mur 828 CATCCCGGTCCTTGGAAAGCATAATGTGAAAAACGCATTAGCCGCGATTG 877
BSNT_00784___ 941 CTGCAGG-GGCTTATT--TTGGCATCACGCCTGAGGGTGCG--------G 979
|.||.|| |.|.|.|| .||.|| ||| ||| |
BL02194___mur 878 CGGCCGGAGACCTCTTGAATGTCA----GCC-------GCGCTCACATTG 916
BSNT_00784___ 980 CAAAAGGACTGAGCGGCCTA-----AAGGTAACCGGGATGAGACTTGAAC 1024
||.||||.|||| ||| ||.||.|||||.|||.|.|||||.|
BL02194___mur 917 CAGAAGGGCTGA-----CTAAACTGAAAGTGACCGGAATGCGGCTTGAGC 961
BSNT_00784___ 1025 TCATCAAAACAGACAG-CGGCCTTTCGATAATCAATGACGCTTATAATGC 1073
|..|.||.|| |.|.| ||||.||.||||.||.||||||||.||||||||
BL02194___mur 962 TAGTAAAGAC-GCCGGACGGCGTTGCGATCATTAATGACGCCTATAATGC 1010
BSNT_00784___ 1074 GAGCCCGACTTCCATGAAAGCTGCAATTCAA--TTG----ACAGA--AAG 1115
.||||||||.||.||||||||.||.| ||.| ||| ||||| |||
BL02194___mur 1011 CAGCCCGACATCGATGAAAGCGGCGA-TCGAGCTTGTCGAACAGATGAAG 1059
BSNT_00784___ 1116 CCTCGAAGGCTACGGCAAAAAAATGCTCGTGCTCGGTGATATGCTTGAAC 1165
||.||||||||.||.||.||.||.|||||.||||||||.||.|
BL02194___mur 1060 -------GGATACGGCAAGAAGATTCTTGTTCTCGGCGATATGCTGGAGC 1102
BSNT_00784___ 1166 TCGGCGATCTTGAAGAAACGTTCCATAAAGA----GTGC-GGCGCTGTGA 1210
||||.||....|||.||.||||.|||.|||| |.|| ||| |.
BL02194___mur 1103 TCGGAGAAGGAGAAAAAGCGTTTCATGAAGAAATCGGGCAGGC-----GG 1147
BSNT_00784___ 1211 TCAGCCCTGATAAAATTGACCGCGTCTTTACGTACGGAAAACTGGGAGCT 1260
|||.|||.||....||.|||....|.||||||||.|||.||||.||.||.
BL02194___mur 1148 TCAACCCGGACTCGATCGACTTTTTATTTACGTATGGAGAACTCGGTGCA 1197
BSNT_00784___ 1261 TTTATCGCGGAAGGCGCCCTGAAACAATTTGAGAAAGACCGCGTCAGCCA 1310
|.|||.||..||||.||.||.|||||.||...|.||.||||||||...||
BL02194___mur 1198 TATATTGCAAAAGGGGCGCTTAAACATTTCCCGGAACACCGCGTCCTTCA 1247
BSNT_00784___ 1311 TT---ACACTGAGAAAAAAGATCTCCTCCAAGCTG----------TGAAG 1347
|| ||.|.||..||||||| ||...|| ||||.
BL02194___mur 1248 TTTCAACCCGGAAGAAAAAGA-------CAGTTTGAAAAAGACACTGAAA 1290
BSNT_00784___ 1348 GAAAA--CGCATCAAAAGGCGATTTGATTTTATTCAAAGCGTCCAGAGGT 1395
||||| ||.|| |.|||.|||||.||..|..||||||||||||||||.
BL02194___mur 1291 GAAAAAGCGAAT--ACAGGGGATTTAATCCTCGTCAAAGCGTCCAGAGGC 1338
BSNT_00784___ 1396 ATGAAGCTTGAAGAAATCGTTAAAGATT--TAATAGAGAGCCCGCTTTCA 1443
|||...|||||.||..|..|.||||||| |||
BL02194___mur 1339 ATGCGCCTTGAGGATGTTATAAAAGATTTGTAA----------------- 1371
BSNT_00784___ 1444 TAA 1446
BL02194___mur 1371 --- 1371
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