Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00783 and BL02193
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence dna-align/BSNT_00783___ddl.1.5803.seq
# -bsequence dna-align/BL02193___ddl.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00783___ddl-BL02193___ddl.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00783___ddl-BL02193___ddl.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00783___ddl
# 2: BL02193___ddl
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1111
# Identity: 853/1111 (76.8%)
# Similarity: 853/1111 (76.8%)
# Gaps: 50/1111 ( 4.5%)
# Score: 3189.5
#
#
#=======================================
BSNT_00783___ 1 TTGAAAACAAGTCTAGGATTAGTGTACGGAGGAAAGTCGGCAGAACATAA 50
|||||.|||||..|||||||.||.|||||.|||||.||.||.||.|||||
BL02193___ddl 1 TTGAAGACAAGATTAGGATTGGTATACGGCGGAAAATCAGCGGAGCATAA 50
BSNT_00783___ 51 TGTTTCCCTGCAGACGGCTCTGGCTGTAATCAAAGCGCTAAATACTGAGA 100
.|||||.|||||.||.||.|||||.||.|..|||||..||.|||||||.|
BL02193___ddl 51 CGTTTCTCTGCAAACCGCGCTGGCCGTCACGAAAGCATTAGATACTGAAA 100
BSNT_00783___ 101 AGTTTGATATACATCCGATTTATATAACAGAAAAAGGCGAATGGGTAAGA 150
|.|||||||||||.||||||||||||||||||||||||||.|||||.|||
BL02193___ddl 101 AATTTGATATACACCCGATTTATATAACAGAAAAAGGCGAGTGGGTGAGA 150
BSNT_00783___ 151 GG--CGCCCGTTTAACT----GAGCCTGTTTCAAATGTGAAAATGCTTCA 194
|| ||| |||| ||.||.||||||||||||||||||||.||
BL02193___ddl 151 GGGCCGC------AACTGACAGAACCGGTTTCAAATGTGAAAATGCTGCA 194
BSNT_00783___ 195 ATTTGAGCA-AGGAGGCAGTGCTTTTTCTCCAGCTGCCCTGAACCAGGAG 243
||||||.|| |.|.|.||| .|.||||||||.||||...||||||..||.
BL02193___ddl 195 ATTTGAACAGACGGGCCAG-ACATTTTCTCCGGCTGTGTTGAACCGCGAT 243
BSNT_00783___ 244 ATGTTTCC--GCAGGAAGCGTCACAGCAAAATGAAG---CCATCGACGTC 288
|||||||| || ||||| |.| .|||||| |||| |.|||||.||.
BL02193___ddl 244 ATGTTTCCTGGC--GAAGC-TGA-TGCAAAA-GAAGACTCTATCGATGTT 288
BSNT_00783___ 289 GTATTCCCGCTCCTCCACGGACCGAATGGAGAAGACGGTACGATCCAGGG 338
||.||||||||..|.||||||||||||||.||||||||.||.||.||.||
BL02193___ddl 289 GTTTTCCCGCTTTTGCACGGACCGAATGGGGAAGACGGCACCATTCAAGG 338
BSNT_00783___ 339 AATGCTTGAGCTGTTGAACATTCCTTATGTCGGCAACGGAGTGCTT-GCT 387
.||||||||.||.|||||..|.||.|||||.||||||||||| ||| |||
BL02193___ddl 339 GATGCTTGAACTATTGAATGTGCCATATGTGGGCAACGGAGT-CTTGGCT 387
BSNT_00783___ 388 TCCTCAGCTGGGATGGATAAAGTTGTCATGAAACATTTATTTGCGCAGGC 437
|||||.||.||.|||||||||||.||||||||.|||.|.|||||.|||||
BL02193___ddl 388 TCCTCTGCGGGCATGGATAAAGTGGTCATGAAGCATCTGTTTGCACAGGC 437
BSNT_00783___ 438 TGGCCTTGCTCAGGCTAAATACGCAGCTTTCCTT----AAGAAAGAC-TG 482
.||.||||..|||||.||||||| ||||.|| || |||.|| ||
BL02193___ddl 438 AGGTCTTGACCAGGCGAAATACG----TTTCATTTTTGAA-AAAAACTTG 482
BSNT_00783___ 483 GACTCGTTCTCCGAAAGAAAGCTGTGAGCAGGTTGAACAGGAATTAGGCT 532
||.||..|||....|||||.|||.||..||.||.|||..||||.|.||||
BL02193___ddl 483 GAGTCAGTCTAAAGAAGAATGCTATGCTCAAGTGGAAGGGGAACTTGGCT 532
BSNT_00783___ 533 ACCCTTGCTTCGTAAAACCGGCGAACCTCGGCTCAAGTGTTGGAATCAGC 582
|.||.|||||.|||||||||||.|||||.||.|||||.||.||.||||||
BL02193___ddl 533 ATCCGTGCTTTGTAAAACCGGCCAACCTTGGATCAAGCGTCGGGATCAGC 582
BSNT_00783___ 583 AAATGCCGAAACCGTGAAGAACTGCAAAAAGCGTTTGAGCTTGCTTTCCA 632
||||||.|||.|||||||||.||..|..||||.|||||||||||.|||||
BL02193___ddl 583 AAATGCAGAAGCCGTGAAGAGCTTGACCAAGCCTTTGAGCTTGCATTCCA 632
BSNT_00783___ 633 ATATGACCGCAAAGTCGTCGTTGAAGAAGGAATTAACGGCCGCGAGATTG 682
|||||||||.|||.|.|||||||||||.||..|.|.|||.||.||.||.|
BL02193___ddl 633 ATATGACCGGAAAATTGTCGTTGAAGAGGGCGTCATCGGACGGGAAATAG 682
BSNT_00783___ 683 AGATCGGCGTTCTTGGAAATGACGATCCTAAATGCTCTGTTGTGGGAGAA 732
|..||||||||.|.||.|||||.||.|||...|||||.||.|.|||.|||
BL02193___ddl 683 AACTCGGCGTTTTAGGGAATGATGAACCTGTCTGCTCAGTCGCGGGGGAA 732
BSNT_00783___ 733 ATCGCACCGAAGACAGATTTCTACGATTACAAAGCGAAATATGAGGATGG 782
|||||.|||||||.|||.||.||.||.||.|||||.||||||||.||.||
BL02193___ddl 733 ATCGCTCCGAAGAAAGACTTTTATGACTATAAAGCAAAATATGAAGACGG 782
BSNT_00783___ 783 AGATACTGATCTGATGATTCCGGCAATT--GTGACCGATGAGGAATACGC 830
.|||||||||.||||.|||||||| || .||||.||.||.|||||||.
BL02193___ddl 783 CGATACTGATTTGATTATTCCGGC--TTCCCTGACAGAAGACGAATACGA 830
BSNT_00783___ 831 TACAAT---CAGTGATATGGCGATCAAGGCGTTTAAAGCGATCGATGGTT 877
.||||| ||| .||||||.||||.||||||.|.|||||.||.||||
BL02193___ddl 831 AACAATGCGCAG---CATGGCGGTCAAAGCGTTTCAGGCGATTGACGGTT 877
BSNT_00783___ 878 CAGGACTCGTCAGAGCGGACTTTTTCCTGACAGCTGACGGCGAAGTTCTG 927
||||.||.||.|||||||||||||||||.|||..|||.|||...||.|||
BL02193___ddl 878 CAGGCCTTGTGAGAGCGGACTTTTTCCTTACAAATGAAGGCAGGGTCCTG 927
BSNT_00783___ 928 ATCAATGAAGTCAACACAATGCCTGGCTTTACACCTTTCAGCATGTTCCC 977
||||||||||||||.||.|||||.||.||.||.||.|||||||||||.||
BL02193___ddl 928 ATCAATGAAGTCAATACGATGCCGGGATTCACCCCGTTCAGCATGTTTCC 977
BSNT_00783___ 978 GCTGCTCTGGAAAGAAGCCGGAGTGGAATATGCTGACCTGATTGAACAGC 1027
|||.||||||||..||.|.||.||.||.||.|||||.|||||||||.|||
BL02193___ddl 978 GCTTCTCTGGAAGCAATCAGGGGTTGAGTACGCTGAACTGATTGAAAAGC 1027
BSNT_00783___ 1028 TTGTGGAGCTT--GCAAAAGAACGCCACGCTGAAAAACAATTGATTAAGC 1075
|||| .|||| ||||..||.|||||||..||||||||...||||||.|
BL02193___ddl 1028 TTGT--CGCTTTGGCAATCGAGCGCCACGAAGAAAAACAGCAGATTAAAC 1075
BSNT_00783___ 1076 ATACATTCTAA 1086
|||||||.|||
BL02193___ddl 1076 ATACATTTTAA 1086
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