Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00777 and BL02192
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:24
# Commandline: needle
# -asequence dna-align/BSNT_00777___ydbM.1.5803.seq
# -bsequence dna-align/BL02192___ydbM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00777___ydbM-BL02192___ydbM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00777___ydbM-BL02192___ydbM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00777___ydbM
# 2: BL02192___ydbM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1200
# Identity: 824/1200 (68.7%)
# Similarity: 824/1200 (68.7%)
# Gaps: 105/1200 ( 8.8%)
# Score: 2701.0
#
#
#=======================================
BSNT_00777___ 1 --ATG-TCATTATTTATACAAAACGATCAA---CAGCGGCAATGGATGGA 44
.|| |||.|||||.| .|||||| .|| ||||.|.|||||.|.||
BL02192___ydb 1 GTGTGTTCAATATTTGT-GAAAACG--GAAAGGCAGCAGGAATGGCTCGA 47
BSNT_00777___ 45 GAAAATCGGACGGATT-GCGGATGAATTTCAGCAAACTGCTGCTGAAGAT 93
.||||||||| ..||| ||||||||||||.||.||||.||.||..|..||
BL02192___ydb 48 TAAAATCGGA-AAATTGGCGGATGAATTTGAGAAAACAGCAGCGTACTAT 96
BSNT_00777___ 94 GACGAACAGGGACGTTTTCCTGCAGAGAAAATACAAAAACTGCGTGATGC 143
||||||||.|.||..|||||.|||||..|.||.|||||.|||||.|||.|
BL02192___ydb 97 GACGAACATGCACAATTTCCCGCAGAACATATTCAAAAGCTGCGGGATTC 146
BSNT_00777___ 144 TGGGTATACAGCATTAACATTGCCGG--CATCTCATGGCGGAGGGGGCAT 191
.||.||.|||||..|.|| .|.||| .|..|.|.||.||||..|||||
BL02192___ydb 147 AGGCTACACAGCGCTGAC--GGTCGGAAAAGATTACGGAGGAGAAGGCAT 194
BSNT_00777___ 192 TTCTGTTTACGATATGCTCCTGTTTCAAGAGCGGCTTGCACGGGGAGATG 241
|||..|.|||||||||||..|||||||.||.||||||||....|||||.|
BL02192___ydb 195 TTCGCTCTACGATATGCTTTTGTTTCAGGAACGGCTTGCCAAAGGAGACG 244
BSNT_00777___ 242 CTCCGACGGCTCTTAGCATCGGCTGGCATTTGAGCGTGATCGGGGAGCTT 291
..|||||||||||.||||||||||||||.||.||||||||.|||||.||.
BL02192___ydb 245 GACCGACGGCTCTCAGCATCGGCTGGCACTTAAGCGTGATGGGGGAACTG 294
BSNT_00777___ 292 GGAGAAGGCAACAGCTGGGATGAAGACGTATTTGCATTTGTTGCCAAGGA 341
|..||.||.|||||||||||....||.||.|||.|||...||.||.|.||
BL02192___ydb 295 GCGGAGGGAAACAGCTGGGACCGGGATGTGTTTTCATCGCTTTCCCATGA 344
BSNT_00777___ 342 AGTCCA--AAACGGAGCCGTCATTAACAGGGCGGCGACTGAAGCGAAAAC 389
|| || |||.||.||..|.||.|||||.|||||.|.|||||||.|.||
BL02192___ydb 345 AG--CATTAAAGGGCGCGCTGATCAACAGAGCGGCAAGTGAAGCGCAGAC 392
BSNT_00777___ 390 CGGAAGCCCGACAAGAGGAGGGCGTCCCGGTACACACGCCGTCAAAAAGG 439
.||.|||||||||||||||||.||.|||||.||.||.||.|||||||||.
BL02192___ydb 393 AGGCAGCCCGACAAGAGGAGGACGCCCCGGAACCCATGCAGTCAAAAAGA 442
BSNT_00777___ 440 ATGGCAAATGGGCAGTGAACGGGAGAAAAACCTTTACGACGATGTCACAG 489
|.|||...|||...||.|||||..|.|||||.||.||.||||||||.|.|
BL02192___ydb 443 ACGGCGGCTGGATTGTAAACGGCCGTAAAACATTCACAACGATGTCTCCG 492
BSNT_00777___ 490 GCTCTGGATTATTTTTTAGTAACCGCATGGATTGAGGACAAACAAACAAC 539
|.|||.||.||||||.|.||.|||||.||||||||.||.||.||||..|.
BL02192___ydb 493 GTTCTCGACTATTTTCTTGTCACCGCTTGGATTGAAGAGAAGCAAATGAT 542
BSNT_00777___ 540 AGGCGTGTTTC-TCATTCATAAAGATGATCCC----GGCTTGTCGATTGA 584
.||||| |||| |.||.|||||||||| | ||||||.|.||.||
BL02192___ydb 543 CGGCGT-TTTCTTGATCCATAAAGATG----CGGAAGGCTTGGCAATAGA 587
BSNT_00777___ 585 AGAAACGTGGGATATGATGGCGATGCGGGCGTCTGGGAGCCATGACCTTG 634
||||||||||||||||..|||||||.|||...|.||.|||||.||..|.|
BL02192___ydb 588 AGAAACGTGGGATATGGCGGCGATGAGGGGCACGGGAAGCCACGATTTGG 637
BSNT_00777___ 635 TACTGA---------------ACGAAGTCATGCTTGATGAGAATAAGCTG 669
|.|||| |||||..||||||||.|| |.|||
BL02192___ydb 638 TGCTGACCGATGTCCGTCTGGACGAATCCATGCTTGTTG------AACTG 681
BSNT_00777___ 670 GTGGAACTGCTTCAAGGGCCTCGCGGAGCTAAGCCGAAT----GGCTGGC 715
.||| |||.|..|||..|| |.||| ||| |||||||
BL02192___ydb 682 TTGG--CTGGTAAAAGAACC-------GATAA----AATCAACGGCTGGC 718
BSNT_00777___ 716 TGCTTCACATTCCGGCGATTTATCTTGGTGTGGCTCAAGCTGCTCGTGAC 765
|||||||.||.|||||..|.|||.|.||..|.||.|||||.||..|.|||
BL02192___ydb 719 TGCTTCATATACCGGCTGTCTATTTAGGGATCGCACAAGCAGCGAGAGAC 768
BSNT_00777___ 766 TATGCAGTGCAATTTGCATCTGAGTATTCTCCAAACAGCTTGAATGGACC 815
|||||.||.|||||||||...||.|||...||.|||||||||||.||.||
BL02192___ydb 769 TATGCTGTCCAATTTGCAAAAGACTATCAGCCGAACAGCTTGAAAGGTCC 818
BSNT_00777___ 816 GATCAAGAATGTCCCGGCCGTACAGCAAAGAACA----GGCGAAATGGAG 861
||||||..|.||.||.||.||.|||| ..|| ||||||||.||.
BL02192___ydb 819 GATCAAAGAGGTGCCCGCTGTTCAGC----GCCATATCGGCGAAATCGAT 864
BSNT_00777___ 862 CTTGAACTGCTCAATGCCAGACACTTTCTTTTCCATATCGCTCAATTGTA 911
||.|||||..|.||.|||.|.||||||.|.|..|||.|.||..|..|.||
BL02192___ydb 865 CTGGAACTCATGAAAGCCCGCCACTTTATGTATCATGTTGCAGAGCTTTA 914
BSNT_00777___ 912 TGACGATCCGGAGCGGCGTCCACACTTGACAAGCGAGCTCGGTGCGGCTA 961
|||.|||||||||||.||..|.|..||||||.|.|||||.||.||||.||
BL02192___ydb 915 TGATGATCCGGAGCGCCGCGCCCTTTTGACAGGTGAGCTTGGAGCGGTTA 964
BSNT_00777___ 962 AGCATATCGTCACAAACGCTGC----GCTGTCTGTTGTTGATAAAGCGAT 1007
||||.|..||.||.||..|.|| |.|||| ||.||.||.|||||
BL02192___ydb 965 AGCACACGGTAACGAATACGGCCATTGATGTC----GTAGACAAGGCGAT 1010
BSNT_00777___ 1008 GAGAATTGTCGGGGCCAAAAGCCTGGAACGAACCAACCCGCTTCAGCGCT 1057
||||.|.|||||.||.|||||.||.|.|.||||.||||||||.||..|.|
BL02192___ydb 1011 GAGAGTCGTCGGAGCGAAAAGTCTCGCAAGAACGAACCCGCTCCAAAGAT 1060
BSNT_00777___ 1058 ATTACCGTGATGTGCGCGCCGGTCTTCACAACCCGCCGATGGATGACGCC 1107
..|||||.|||||.||.||.||.||.||||||||||||||||||||
BL02192___ydb 1061 TCTACCGCGATGTCCGGGCGGGCCTCCACAACCCGCCGATGGATGA---- 1106
BSNT_00777___ 1108 GTGATACA-----CAAGCTGGCGGCTGAAGCGTTTG-AGTCA--TAA--- 1146
||..||| ||||||.||.| ||| ||| |.||| .||
BL02192___ydb 1107 -TGCGACAATCGCCAAGCTTGCAG--GAA----TTGCATTCAGCGAATAG 1149
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