Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01407 and BL02184
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_01407___yfhA.1.5803.seq
# -bsequence dna-align/BL02184___yfhA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01407___yfhA-BL02184___yfhA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01407___yfhA-BL02184___yfhA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01407___yfhA
# 2: BL02184___yfhA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1110
# Identity: 725/1110 (65.3%)
# Similarity: 725/1110 (65.3%)
# Gaps: 132/1110 (11.9%)
# Score: 2233.5
#
#
#=======================================
BSNT_01407___ 1 ATGAAACTTCGTTTTGGCGTTACTGC-GGCTGAAAA---GAAA-----GC 41
|||||| ..||||.|| .|||||.|| |||| ||
BL02184___yfh 1 ATGAAA-----------AATTACCGCACGCTGAGAATCGGAAAAGGCGGC 39
BSNT_01407___ 42 A--------TGGATCG------------TCTTTT------TAATTTTACT 65
| |.||||| |.|||| |.||..||.|
BL02184___yfh 40 ATTTCATTGTTGATCGGCAGAAAAGCGCTGTTTTCATTCGTGATCCTATT 89
BSNT_01407___ 66 GGGGTTAACAGCTGCTGTACTCATCATAAGCGCAGGTCTCGGACAAAGGT 115
||.|||.||.|||..||.|.|||||.|.|||||.||..||||..||.|.|
BL02184___yfh 90 GGTGTTGACGGCTTGTGCAGTCATCCTCAGCGCCGGCATCGGCGAACGTT 139
BSNT_01407___ 116 TTATTCCTCCCTGGGATGTAGCAAAAACATTCTTTGGTGCA----GGTTC 161
|||||.||||..|.|..||.||.|||||.|| ||||| ||| ||.||
BL02184___yfh 140 TTATTTCTCCGGGCGCCGTCGCGAAAACGTT-TTTGG-GCATGGGGGATC 187
BSNT_01407___ 162 CAAGCTGGATGAACTGATGATCATGTCGTTCCGCATGCCAAGAATTTTGA 211
|..|| |||||.|||||.||||||||.|||.|.|||||..|.||||||.
BL02184___yfh 188 CGGGC--GATGACCTGATCATCATGTCCTTCAGGATGCCGCGGATTTTGG 235
BSNT_01407___ 212 CAGCTTTATGCGCCGG----TGTCTGCTTGGCAGCGGCAGGCG---CGAT 254
..|||.|.|..||||| |||||| |||||||.|| ||||
BL02184___yfh 236 TTGCTCTGTTTGCCGGAATCTGTCTG-------GCGGCAGCCGGATCGAT 278
BSNT_01407___ 255 ATTGCAGGGGCTCGTCAGAAACCCTCTCGCATCTCCGGATATTATCGGAA 304
..|.|||||.||..||.|.||.||.|||||.||.||||||||||||||..
BL02184___yfh 279 CCTCCAGGGTCTGATCCGCAATCCGCTCGCTTCGCCGGATATTATCGGTG 328
BSNT_01407___ 305 TAACAGGAGGAGCGGCGGTAGC---GGTCGTGCTTTTAATGATGTTCTTC 351
|.||.||.||.||..|.||.|| .|||.||.||||||||.|||| |||
BL02184___yfh 329 TGACCGGCGGGGCTTCAGTCGCCGTTGTCTTGTTTTTAATGCTGTT-TTC 377
BSNT_01407___ 352 TCAGACCGCAGCAGTTCACTTACGATCAG--TCTGTCATGGCTTCCAGCA 399
..|.| ..|..|.|.|.||||||.|||| ||.| .|||||.||.|..
BL02184___yfh 378 CAATA--AAAATAATGCGCTTACGGTCAGCATCAG--CTGGCTCCCGGTC 423
BSNT_01407___ 400 GCCGCATTTATCGGCGCATCGGCT---GTCGGGCTCATCGTCTATTTACT 446
|||||.|||||||||| ||||| |.|||..|..||||.|||||.||
BL02184___yfh 424 GCCGCTTTTATCGGCG---CGGCTCTCGCCGGAATGCTCGTTTATTTTCT 470
BSNT_01407___ 447 GGCATACAAAAATGGCGCCTCCACATTTC-GGCTGGTGCTGATCGGAATC 495
..||||.|||||.|||.|.||.|| |||| ||||.||..|||||||||||
BL02184___yfh 471 TTCATATAAAAACGGCTCTTCAAC-TTTCAGGCTCGTTTTGATCGGAATC 519
BSNT_01407___ 496 GGATTTTCAATGTCGGCGCAGGCGATGACTACCCTGTTGATGATCAAAGG 545
||||||||.|||...||.|||.||.||||.||..||||.|||||.|||||
BL02184___yfh 520 GGATTTTCGATGCTTGCCCAGTCGCTGACGACATTGTTTATGATAAAAGG 569
BSNT_01407___ 546 TCCGATTTACCGGGCATCACAAGCCAATGTGTATATCACTGGGTCAGTTT 595
.|||||.|||.|....||.||.||.||.||.|..||.||.||.|||||.|
BL02184___yfh 570 ACCGATATACAGAATGTCCCAGGCGAACGTCTGGATTACCGGATCAGTAT 619
BSNT_01407___ 596 ATGGGTCAAACTGGCAGCATGTAAAAATAGCTATTATCTTAT------CT 639
||||.||.|||||||||.||||.|| ..|.|||| ||
BL02184___yfh 620 ATGGCTCCAACTGGCAGGATGTGAA---------CGTTTTATTGCCGGCT 660
BSNT_01407___ 640 GTCATTCTCTTATTCATTTG-TTTTGTCG--------CGCTAAAAAATAT 680
| |.|||.|.|.|||| |..|.||| ||| .|.|||..|
BL02184___yfh 661 G-----CGCTTGTCCTTTTGCTGATATCGGCAGCCGCCGC-CAGAAACGT 704
BSNT_01407___ 681 GAATATACAGGTGCTGGGTGAAGATATTGCGGCGGGTGCAGGAAGCGCTG 730
.|||||.|||..|||.||.|||||..|.|||.|.||.||.||.|||.|.|
BL02184___yfh 705 CAATATCCAGACGCTCGGCGAAGAACTGGCGACAGGAGCGGGCAGCTCGG 754
BSNT_01407___ 731 TGCAGCGAAATCGTTTTTTCTTGCTACTTTTGAGTACGGCTCTTACTGGT 780
|.||||||||.||.|||||..|.||.|||.||||.||.|||.||.|.||.
BL02184___yfh 755 TTCAGCGAAACCGCTTTTTGCTCCTGCTTCTGAGCACTGCTTTTGCCGGA 804
BSNT_01407___ 781 TGTGCAGTTTCAGTTGCCGGCACAATCGGTTTTGTCGGGCTGATGGCGCC 830
...||.|||.|..|||||||.||..|||||||||||||..|||||||.||
BL02184___yfh 805 ATCGCCGTTGCTTTTGCCGGAACTGTCGGTTTTGTCGGTTTGATGGCCCC 854
BSNT_01407___ 831 CCATATTGCAAGACGGCTTGTCGGCTCATCTTATGGCGCGCTGCTCCCAG 880
.|||||.||||||.||||||||||.||.||.|..|||||.||..|.||.|
BL02184___yfh 855 GCATATCGCAAGAAGGCTTGTCGGATCGTCATTCGGCGCCCTCTTGCCGG 904
BSNT_01407___ 881 CGTCGGCACTTATTGGAGCTCTGCTCGTTTTAACAGCTGAT-------AT 923
...|.||.||.||.||||...||||||| |||||| ||
BL02184___yfh 905 TTGCCGCGCTGATCGGAGGATTGCTCGT-------GCTGATTGCCGACAT 947
BSNT_01407___ 924 CGTCGGCAGAAC-CTTATTTGCTCCGGTGGAAGTGCCGGCCGGCGTCTTT 972
|.|||||.|.|| ||| |||.||||.||.||||||||.|||||.||.|||
BL02184___yfh 948 CATCGGCCGCACGCTT-TTTTCTCCCGTTGAAGTGCCTGCCGGTGTGTTT 996
BSNT_01407___ 973 ACAGCGGCTATCGGCGCACCTTATTTTATTTATTTGCTCTATAAAACAAG 1022
||.||.||.||||||||.|||||.|||||.||.|||||.|||||||..||
BL02184___yfh 997 ACCGCCGCGATCGGCGCCCCTTACTTTATCTACTTGCTGTATAAAAGCAG 1046
BSNT_01407___ 1023 AAATTCTTAA 1032
|||....|||
BL02184___yfh 1047 AAACCAATAA 1056
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