Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04867 and BL02179
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence dna-align/BSNT_04867___yusK.1.5803.seq
# -bsequence dna-align/BL02179___yusK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04867___yusK-BL02179___yusK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04867___yusK-BL02179___yusK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04867___yusK
# 2: BL02179___yusK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1202
# Identity: 886/1202 (73.7%)
# Similarity: 886/1202 (73.7%)
# Gaps: 52/1202 ( 4.3%)
# Score: 3139.0
#
#
#=======================================
BSNT_04867___ 1 ATGAAAGAGGCAGTCATTGTGTCAGGTGCAAGAACACCGGTTGGAAAAGC 50
||||||||||||||.|||||.||.||.||.|||||.|||.|.||||||||
BL02179___yus 1 ATGAAAGAGGCAGTTATTGTATCGGGGGCGAGAACCCCGATCGGAAAAGC 50
BSNT_04867___ 51 AAAAAAAGGATCGTTGGCCACCGTTCGTCCGGATGATTTGGGAGCGATTT 100
|||||||||.||.|||...||.||.|||||.||||||||.||.|| ||.|
BL02179___yus 51 AAAAAAAGGCTCATTGAGGACTGTCCGTCCCGATGATTTAGGCGC-ATAT 99
BSNT_04867___ 101 G-TGTAAAAGAGACACTGAAACGGGCAGGCGGTTACGAAGGTAATATTGA 149
| .||.|.||||||.||||||.|.||.||||||||.|||||.|||||.||
BL02179___yus 100 GCGGTGAGAGAGACGCTGAAAAGAGCGGGCGGTTATGAAGGGAATATCGA 149
BSNT_04867___ 150 CGATTTGATTATTGGCTGTGCAACGCCTGAAGCGGAGCAGGGGCTT-AAC 198
.||||||||.||.|||||.||.|||||.|||||.||.|| .||||| ||.
BL02179___yus 150 TGATTTGATCATCGGCTGCGCTACGCCGGAAGCCGAACA-AGGCTTGAAT 198
BSNT_04867___ 199 ATGGCGAGAAATATCGGGGCGCTCGCGGGATTGCCATACACGGTTCCGGC 248
||||||.|.||||||||.|||||.||.||..||||..||||.||||||||
BL02179___yus 199 ATGGCGCGCAATATCGGCGCGCTTGCCGGTCTGCCGCACACAGTTCCGGC 248
BSNT_04867___ 249 GATTACAGTCAACCGGTATTGCTCTTCAGGCCTTCAGTCTATTGCATATG 298
..||||..|||||.|.|||||.||.|||||.|||||.||.||.||.||.|
BL02179___yus 249 CGTTACGATCAACAGATATTGTTCATCAGGACTTCAATCAATCGCTTACG 298
BSNT_04867___ 299 CAGCAGAAAAAATTATGCTGGGCGC--CT---ACGATACAGCGATCGCCG 343
..||.||||||||.|||||.||.|| || ||||| .||.||.|
BL02179___yus 299 GGGCCGAAAAAATCATGCTTGGAGCTGCTGACACGAT-----CATTGCAG 343
BSNT_04867___ 344 GCGGAGCAGAATCCATGTCGCA-AGTTCCGATGATGGGGCATGTTACCCG 392
||||.||.|||||.||| .||| .||.|||||||||||.|||.| ||
BL02179___yus 344 GCGGCGCCGAATCGATG-AGCATCGTGCCGATGATGGGTCATAT----CG 388
BSNT_04867___ 393 T----CCGAACCTTGCTTTGGCAGAAAAGGCACCGGAATATTATATGAGC 438
| ||||||...|||.||||.||||.|||.||.||||||||||||.|.
BL02179___yus 389 TCAGACCGAACGCGGCTCTGGCGGAAACGGCTCCTGAATATTATATGGGA 438
BSNT_04867___ 439 ATGGGACACACAGCCGAGCAAGTCGCGAAAAAATACGGCGTCTCCCGTGA 488
|||||.||.||.||.||.||.||.||....|||||||||||.|||.|.||
BL02179___yus 439 ATGGGCCATACGGCTGAACAGGTTGCCGTCAAATACGGCGTTTCCAGGGA 488
BSNT_04867___ 489 GGATCAAGACGCGTTTGCCGTTCGCAGCCACCAAAACGCCGCTAAAGCCC 538
|||.|||||.||.||||||||...||||||.|||||.||.||.||.||..
BL02179___yus 489 GGACCAAGATGCATTTGCCGTCAACAGCCATCAAAAAGCAGCCAAGGCGA 538
BSNT_04867___ 539 TTGCAGAAGGAAAATTTAAAGATGAAATTGTACCCGTAGAAGTGACGGTG 588
|.||.||||||||.||..||||||||||.||.||.||.||.||.||.||.
BL02179___yus 539 TCGCGGAAGGAAAGTTCGAAGATGAAATCGTCCCGGTGGACGTCACCGTC 588
BSNT_04867___ 589 ACAGAAATCGGA-GAAGACCATAAGCATATGGA----AAAACAGTTTGTG 633
|.||||.| ||| |||.|.|||||.|..|.||| | .||| |.
BL02179___yus 589 AGAGAAGT-GGATGAACATCATAACCTGAAGGAGCGGA----CGTT--TA 631
BSNT_04867___ 634 TTTTCTCAG--GATGAAGGTGTTCGCCCG----CAAACGACTGCAGACAT 677
.||||||.| |||||||||||.|||||| |||.|.| ||||.|
BL02179___yus 632 CTTTCTCTGCCGATGAAGGTGTACGCCCGGGGACAACCAA----AGACGT 677
BSNT_04867___ 678 CTTATCGACATTGCGCCCGGCGTTTTCCGTTGACGGGACGGTGACTGCGG 727
..|.||.||.|||...|||||||||||.|...||||..||||.||.||.|
BL02179___yus 678 TCTGTCAACGTTGAAACCGGCGTTTTCGGCAAACGGCTCGGTTACGGCAG 727
BSNT_04867___ 728 GCAATTCCTCGCAGACAAGTGACGGAGCGGCGGCTGTCATGCTGATGGAC 777
|.||||||||||||||.||.|||||.||.||.||.||.|||.|.||||||
BL02179___yus 728 GGAATTCCTCGCAGACGAGCGACGGGGCTGCCGCAGTGATGATCATGGAC 777
BSNT_04867___ 778 CGGGAAAAAGCCGATGCTCTTGGCCTGGCGCCGCTTGTGAAATTCCGCTC 827
.|.||||||||.||.||.||.||..|...|||.||.|..|||||.||.||
BL02179___yus 778 AGAGAAAAAGCGGACGCACTCGGGTTAAAGCCCCTCGCAAAATTTCGTTC 827
BSNT_04867___ 828 CTTTGCGGTAGGCGGCGTGCCGCCGGAAGTGATGGGAATCGGACCGGTGG 877
.||.||.||.||||||||.|||||||||||||||||.|||||.||.||||
BL02179___yus 828 GTTCGCAGTCGGCGGCGTTCCGCCGGAAGTGATGGGCATCGGCCCTGTGG 877
BSNT_04867___ 878 AAGCGATTCC---GCGCGCTTTGAAGCTTGCCGGACTTCAGCTGCAGGAC 924
|||| |.||| |.|||| |||||.|.||.||||||.|||||..|||.
BL02179___yus 878 AAGC-AGTCCCAAGGGCGC--TGAAGATGGCGGGACTTGAGCTGTCGGAT 924
BSNT_04867___ 925 ATCGGCTTGTTTGAACTGAATGAAGCTTTTGCCTCACAGGCCATTCAAGT 974
|||||.||.||.|||.|.|||||.||.|||||.||.||.||.||.||.||
BL02179___yus 925 ATCGGTTTATTCGAATTAAATGAGGCGTTTGCATCGCAAGCGATCCAGGT 974
BSNT_04867___ 975 AATCAGGGAATTGGGAATTGATGAAGAAAAAGTGAATGTCAACGGGGGCG 1024
.||||||....|.||.|||||||||||||||||.|||||||||||.||.|
BL02179___yus 975 CATCAGGTCGCTTGGCATTGATGAAGAAAAAGTCAATGTCAACGGCGGAG 1024
BSNT_04867___ 1025 CAATCGCGCTTGGACACCCGCTTGGCTGTACGGGCACGAAGCTTACACTC 1074
|.||.|||||.|||||.|||||.|||||.|||||.||.|||||.||.||.
BL02179___yus 1025 CGATTGCGCTCGGACATCCGCTCGGCTGCACGGGTACAAAGCTGACGCTG 1074
BSNT_04867___ 1075 TCACTCATCCATGAAATGAAACGGAGAAATGAGCAATTTGGAGTCGTGAC 1124
.||.|.|||||.||||||...|||||||..||||||||.||..|.|||||
BL02179___yus 1075 ACATTGATCCACGAAATGCGCCGGAGAAGCGAGCAATTCGGCATTGTGAC 1124
BSNT_04867___ 1125 CATGTGTATCGGCGGCGGGATGGGAGCGGCCGGTGTATTTGAATTATGCT 1174
.||||||||||||||.||.||||||||.||.||.|||||.||||||...|
BL02179___yus 1125 GATGTGTATCGGCGGAGGCATGGGAGCAGCAGGGGTATTCGAATTAGTTT 1174
BSNT_04867___ 1175 AA 1176
||
BL02179___yus 1175 AA 1176
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