Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04863 and BL02177
See
Amino acid alignment /
Visit
BSNT_04863 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:03
# Commandline: needle
# -asequence dna-align/BSNT_04863___yusI.1.5803.seq
# -bsequence dna-align/BL02177___yusI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04863___yusI-BL02177___yusI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04863___yusI-BL02177___yusI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04863___yusI
# 2: BL02177___yusI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 358
# Identity: 280/358 (78.2%)
# Similarity: 280/358 (78.2%)
# Gaps: 2/358 ( 0.6%)
# Score: 1076.0
#
#
#=======================================
BSNT_04863___ 1 ATGTCGTTAACTTTTTACTGGTACCCTAAATGCGGAACGTGCCGCAAAGC 50
|||.|.||...||||||||||||.||.||||||||.||.|||||||||||
BL02177___yus 1 ATGGCTTTGGATTTTTACTGGTATCCGAAATGCGGGACATGCCGCAAAGC 50
BSNT_04863___ 51 AAAGAAGTGGCTTGAAGAGCATGGGAAAGAAATAAACGAAATACATATTG 100
.||.||.|||||.|||||.||.||.||||||||.||.|..||||||||.|
BL02177___yus 51 GAAAAAATGGCTCGAAGACCACGGAAAAGAAATCAATGGGATACATATCG 100
BSNT_04863___ 101 CTGAGCAGCCGCCAAGCAAAGAAGAATTAAAAGCGCTTTATGAAAAAAGC 150
|.||.||||||||.|||||.|||.||.|.||||.|||.||.||.||||||
BL02177___yus 101 CAGAACAGCCGCCGAGCAAGGAAAAACTGAAAGAGCTCTACGAGAAAAGC 150
BSNT_04863___ 151 GGGCTGGATCTCAAGAAATTTTTCAACACGAGCGGCATGAAATACCGCGA 200
|||||.||..|.|||||.||||||||||||||||||...|||||||||||
BL02177___yus 151 GGGCTTGAATTGAAGAAGTTTTTCAACACGAGCGGCCAAAAATACCGCGA 200
BSNT_04863___ 201 GCTCAATCTCAAGGAAAAGCTGTATCACATGTCAGAGGACGAACAGCTCG 250
.|||...||.||.||.||||||.|...||||||.||.||.||.|||||.|
BL02177___yus 201 ACTCGGCCTGAAAGACAAGCTGCAAAGCATGTCTGAAGATGAGCAGCTGG 250
BSNT_04863___ 251 AGCTGCTGGCTTCAGATGGTATGCTGATCAAACGCCCGCTTACAACAGAC 300
|.|||||.||.|||||.||||||||||||||||||||..||||.||||||
BL02177___yus 251 AACTGCTTGCATCAGACGGTATGCTGATCAAACGCCCAATTACGACAGAC 300
BSNT_04863___ 301 GGTGAAAAAGTGACTGTCGGATTTAAAGAAGACCAATTTGAAGA-AAACT 349
||....|||||.||.|||||.|||||||||||.||.||| |||| |.|||
BL02177___yus 301 GGCAGTAAAGTAACGGTCGGTTTTAAAGAAGATCAGTTT-AAGACATACT 349
BSNT_04863___ 350 GGGCTTAA 357
||...|||
BL02177___yus 350 GGTTATAA 357
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.