Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04861 and BL02175
See
Amino acid alignment /
Visit
BSNT_04861 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:03
# Commandline: needle
# -asequence dna-align/BSNT_04861___yusG.1.5803.seq
# -bsequence dna-align/BL02175___yusG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04861___yusG-BL02175___yusG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04861___yusG-BL02175___yusG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04861___yusG
# 2: BL02175___yusG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity: 160/245 (65.3%)
# Similarity: 160/245 (65.3%)
# Gaps: 16/245 ( 6.5%)
# Score: 481.5
#
#
#=======================================
BSNT_04861___ 1 ATGGCTTTCGAC----AAACAAAAGC---TCGATGTCACCAATGACGTGA 43
|.||| |||.||.|.| |.|||.|.||..|..|.|||.
BL02175___yus 1 -------TTGACGCTGAAAAAAGAACGTATTGATATTACAGAACATGTGG 43
BSNT_04861___ 44 CAGGCCGCTTTCAAAATGGCCGGCTCTC-GTTATATCATGATAATGAGAT 92
.|.||||.||..||||.|| |||..|.| |.|.||||||||.||||||.|
BL02175___yus 44 AAAGCCGATTAAAAAACGG-CGGAACGCAGCTGTATCATGAAAATGAGCT 92
BSNT_04861___ 93 GATCGGCCAAATGACAAGCATGAATGAATATGAGCTTAAGCCCGGTTATT 142
||||||||.||||||..|||.|.||.||||.|||.|.||..|.||.||||
BL02175___yus 93 GATCGGCCGAATGACCGGCAAGGATCAATACGAGTTGAAATCTGGATATT 142
BSNT_04861___ 143 CCTTTGAAAATGAGAAATTTTATAAGACAGCCGATGTGGTTTCTGGAGAC 192
|.||..||.||||.||.|||||.||.|..||.|||...||....|||...
BL02175___yus 143 CATTCCAAGATGAAAAGTTTTACAAAATGGCGGATACCGTAAGCGGACCG 192
BSNT_04861___ 193 GACGCAAAATATGTAGATTGTGACTACGAAAACGGCTGGTGTTAA 237
||.||.|||||||||||.|||||..||.|..|.||||||||||||
BL02175___yus 193 GATGCTAAATATGTAGACTGTGATGACCACCAAGGCTGGTGTTAA 237
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.