Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04855 and BL02171
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:03
# Commandline: needle
# -asequence dna-align/BSNT_04855___yusC.1.5803.seq
# -bsequence dna-align/BL02171___metN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04855___yusC-BL02171___metN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04855___yusC-BL02171___metN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04855___yusC
# 2: BL02171___metN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1048
# Identity: 788/1048 (75.2%)
# Similarity: 788/1048 (75.2%)
# Gaps: 44/1048 ( 4.2%)
# Score: 2883.0
#
#
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BSNT_04855___ 1 TTGATCAATCTTCAGGATGTTTCAAAAGTTTACAAATCG----AAACATG 46
|||||.||||||||..||||||||||..||| |||| ||.||||
BL02171___met 1 TTGATAAATCTTCAAAATGTTTCAAAGATTT----ATCGGTCAAAGCATG 46
BSNT_04855___ 47 GAGATGTCAATGCTGTCCAAAATGTCTCGCTTTCCATTAAAAAAGGTGAG 96
||||||||||||||||||||.|||||.|.|||.|.||||||||||||||.
BL02171___met 47 GAGATGTCAATGCTGTCCAAGATGTCACCCTTACGATTAAAAAAGGTGAA 96
BSNT_04855___ 97 ATTTTTGGAATTATAGGATATAGCGGAGCTGGTAAGAGTTCCTTAATCCG 146
||.||.||||||||.||||||||||||||.||.||.||.|||||.|||||
BL02171___met 97 ATCTTCGGAATTATTGGATATAGCGGAGCCGGAAAAAGCTCCTTGATCCG 146
BSNT_04855___ 147 TCTGCTGAACGGCCTTGAGAAACCAACCTCAGGAACCGTGGAAGTGGCGG 196
|||..|||||||.|||||..|.||.||.|||||.||.||.|||||.||.|
BL02171___met 147 TCTCTTGAACGGACTTGAACAGCCGACTTCAGGCACGGTTGAAGTAGCCG 196
BSNT_04855___ 197 G------AACCA---AGATTAATGAAGTAAATGGACGCGGTTTAAGAAAA 237
| ||.|| ||||.| |||..|| ||.|| |.||.|||
BL02171___met 197 GCAGAAAAATCAGCGAGATCA---AAGGGAA--GAAGC----TGAGGAAA 237
BSNT_04855___ 238 GCACGCCATGAGATCAGTATGATTTTCCAGCATTTCAATTTGCTTTGGTC 287
|||.|.||.||.|||||.||||||||||||||||||||..||.|.|||||
BL02171___met 238 GCAAGGCAGGAAATCAGCATGATTTTCCAGCATTTCAACCTGTTATGGTC 287
BSNT_04855___ 288 GCGGACTGTCAGAGATAATATCATGTTTCCTTTGGAAATTGCCGGGGT-- 335
|.|.||.||..|.||.|||||...||||||..||||.||.|||||.||
BL02171___met 288 GAGAACGGTGCGCGACAATATTGCGTTTCCGCTGGAGATCGCCGGTGTCA 337
BSNT_04855___ 336 GAAAA--AGAGCGAGCGGATCAAGCG-CGCCAATGAACTGATTAAACTGG 382
|.||| |.|.||...||| |||.| ||| ||||||||||||.||.|
BL02171___met 338 GCAAAGCAAAACGTCTGGA--AAGAGTCGC---TGAACTGATTAAGCTTG 382
BSNT_04855___ 383 TAGGTTTAGAAGGAAAAGAAAAATCTTATCCATCTCAACTGAGCGGCGGT 432
|.|||.|.|||||.||.|||||..|.||.||.||.||.||||||||.||.
BL02171___met 383 TCGGTCTTGAAGGCAAGGAAAACGCCTACCCTTCACAGCTGAGCGGAGGC 432
BSNT_04855___ 433 CAGAAGCAGCGTGTCGGAATTGCCAGAGCGCTTGCAAACAATCCGAAGGT 482
||.||||||||.|||||.||.||..|.|||||.||||||||||||||.||
BL02171___met 433 CAAAAGCAGCGCGTCGGCATCGCACGGGCGCTCGCAAACAATCCGAAAGT 482
BSNT_04855___ 483 TCTCCTTTGTGACGAAGCGACATCAGCATTAGATCCGCAAACGACAGATT 532
|||..|.||.||.||||||||||||||..|.||||||||.|||||.||||
BL02171___met 483 TCTGTTATGCGATGAAGCGACATCAGCGCTTGATCCGCAGACGACTGATT 532
BSNT_04855___ 533 CAATTCTGGATCTATTGTCCGATATTAATGAAAGACTCGGTTTGACGATT 582
|.|||||||.|||..||||||||||.||||||||.|||||..||||.|||
BL02171___met 533 CGATTCTGGGTCTTCTGTCCGATATCAATGAAAGGCTCGGACTGACCATT 582
BSNT_04855___ 583 GTGCTGATTACGCACGAAATGCATGTCATCCGCAAAATCTGCAACAGAGT 632
||.|||||.||.||.|||||||||||||||.|.|||||||||.|||||||
BL02171___met 583 GTCCTGATCACTCATGAAATGCATGTCATCAGGAAAATCTGCCACAGAGT 632
BSNT_04855___ 633 CGCCGTCATGGAAAACGGCAAGGTGGTCGAAGAAGGCGAGGTTCTCGATG 682
.|||||||||||||||||.|||||.||.|||||||||||.||.||..|.|
BL02171___met 633 GGCCGTCATGGAAAACGGAAAGGTCGTAGAAGAAGGCGATGTACTGAACG 682
BSNT_04855___ 683 TCTTCAAAAATCCAAAGGAACAAATGACAAAACGATTTGTTCAGCAGGTG 732
||||||..||.||.||||||.||||||||||.||.||||||||||||||.
BL02171___met 683 TCTTCATCAAGCCGAAGGAAGAAATGACAAAGCGCTTTGTTCAGCAGGTA 732
BSNT_04855___ 733 ACAGAGCCGGAAGAAACGAAAGAGACGCTTCAGCACCTTCTTGATGATAC 782
|||||.||||..|||||.||.||.|||||..||||..|.||.||.||.||
BL02171___met 733 ACAGAACCGGTGGAAACAAAGGAAACGCTGAAGCATTTCCTCGAAGAAAC 782
BSNT_04855___ 783 AGCATCAGGAAAAATGGTTCAGCTCACATTTGTCGGTGAGTCAGCTGAAC 832
..||||.||....|.|.|..|||||||.||.|||||.||..|.||.|||.
BL02171___met 783 GACATCCGGGCGGACGATCAAGCTCACTTTCGTCGGCGAAGCGGCCGAAT 832
BSNT_04855___ 833 AGCCTCTGATTACAGAGATGATCAGAAACTTGAATGTCAGCGTCAATATT 882
.|||.|||||.||..||||.||..|.||.||..||||....|||||.||.
BL02171___met 833 CGCCGCTGATCACGCAGATCATTCGGAAGTTCGATGTTGAAGTCAACATC 882
BSNT_04855___ 883 CTGCAAGGGAAAATTTCGCAGACGAAGGATGGGGCTTACGGTTCACTGTT 932
||.|||||.|||||.||||||||..||||.||.||.|||||||||.||||
BL02171___met 883 CTTCAAGGCAAAATCTCGCAGACTCAGGACGGTGCATACGGTTCATTGTT 932
BSNT_04855___ 933 CATCCACATTGACGGGGACGAGGAA--GAAGTGCAA-AACGTGATCCGTT 979
|||.||..|.||| |||||.|.|| ||.|| ||| .|||||.||..||
BL02171___met 933 CATACATGTCGAC--GGACGTGAAAACGAGGT-CAATGACGTGGTCGATT 979
BSNT_04855___ 980 TCATTAATGA-CAAACAGGTGAAAGCAGAGGTGATCACGAATGTTTGA 1026
||||.|| || |...|||||..||||||||||||||||||||||||||
BL02171___met 980 TCATCAA-GAGCCGCCAGGTAGAAGCAGAGGTGATCACGAATGTTTGA 1026
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