Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04854 and BL02170

See Amino acid alignment / Visit BSNT_04854 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence dna-align/BSNT_04854___yusB.1.5803.seq
#    -bsequence dna-align/BL02170___metP.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04854___yusB-BL02170___metP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04854___yusB-BL02170___metP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04854___yusB
# 2: BL02170___metP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 674
# Identity:     484/674 (71.8%)
# Similarity:   484/674 (71.8%)
# Gaps:          10/674 ( 1.5%)
# Score: 1676.0
# 
#
#=======================================

BSNT_04854___      1 ATGTTTGAAAAATACTTCCCGAACGTTGATTT-----AACTGAATTATGG     45
                     ||||||||||||...||.||.|||||.|||.|     |.|||     |||
BL02170___met      1 ATGTTTGAAAAACTGTTTCCAAACGTAGATATGGAGCAGCTG-----TGG     45

BSNT_04854___     46 AACGCGACATATGAAACACTTTATATGACGCTGATTTCTTTACTGTTTGC     95
                     .|.||.||.||||||||..|.||||||||....|||||..||.|||||||
BL02170___met     46 GAAGCAACGTATGAAACGATATATATGACAGGAATTTCCCTATTGTTTGC     95

BSNT_04854___     96 TTTTGTCATCGGGGTCATCCTCGGCTTGCTGCTCTTTCTGACGAGCAAAG    145
                     ||||.|||||||.||.||.||||||.|||||||||.|.||||....||||
BL02170___met     96 TTTTATCATCGGAGTGATTCTCGGCATGCTGCTCTATTTGACTTCAAAAG    145

BSNT_04854___    146 GAAGCCTCTGGCAGAATAAAGCGGTCAACTCTGTGATTGCGGCCGTTGTT    195
                     |.|.|.|.||||||||...||..||.|||..|||.||..||||..|.||.
BL02170___met    146 GCAACATTTGGCAGAACCGAGTCGTTAACGGTGTAATCTCGGCAATCGTC    195

BSNT_04854___    196 AACATATTCAGATCGATTCCGTTCCTTATTTTAATTATTTTACTATTAGG    245
                     ||..|.|||||.||.|||||.||..|.||.||.||||||||.||..|.||
BL02170___met    196 AATGTGTTCAGGTCTATTCCTTTTATCATATTGATTATTTTGCTGCTCGG    245

BSNT_04854___    246 TTTTACGAAATTTTTAGTCGGCACGATCTTAGGGCCAAACGCCGCTTTGC    295
                     |||.||.||.||||||.|....|||||..|.|||||.||.||||||.|.|
BL02170___met    246 TTTCACAAAGTTTTTAATGAATACGATTCTGGGGCCGAATGCCGCTCTTC    295

BSNT_04854___    296 CGGCGCTGGTAATCGGCTCGGCACCATTTTACGCGCGCCTTGTTGAAATC    345
                     ||||..||.|.||||..||.||.||.||.||.||.|||||.||||||||.
BL02170___met    296 CGGCTTTGATTATCGCATCCGCTCCGTTCTATGCCCGCCTGGTTGAAATT    345

BSNT_04854___    346 GCGCTGCGTGAGGTGGATAAAGGTGTGATTGAAGCCGCTAAATCAATGGG    395
                     ||..||||.|||||.||.|||||.|||||||||||.||.|||||.|||||
BL02170___met    346 GCTTTGCGCGAGGTCGACAAAGGCGTGATTGAAGCAGCGAAATCGATGGG    395

BSNT_04854___    396 CGCGAAAACGTCTACGATTATTTTCAAAGTGTTGATTCCGGAATCAATGC    445
                     .||.|||||.||.|||||.||.||.||||||.|..|.||.|||||.||||
BL02170___met    396 GGCAAAAACATCGACGATCATATTTAAAGTGCTCCTGCCCGAATCGATGC    445

BSNT_04854___    446 CTGCTCTTATTTCTGGCATTACGGTTACTGCCATCGCTTTGATCGGCTCA    495
                     |.||.||.||.||.||||||||||||||.|||||.||..|||||||.||.
BL02170___met    446 CGGCGCTGATCTCAGGCATTACGGTTACAGCCATTGCACTGATCGGTTCG    495

BSNT_04854___    496 ACGGCAATTGCCGGAGCCATTGGTTCAGGAGGCCTTGGAAACCTTGCGTA    545
                     ||.||.||.||||||||.||.||||||||.||.||.||.||||||||.||
BL02170___met    496 ACAGCGATGGCCGGAGCAATCGGTTCAGGCGGACTCGGGAACCTTGCCTA    545

BSNT_04854___    546 CGTAGAAGGATATCAGTCTAATAACGCTGATGTTACCTTCGTTGCTACTG    595
                     .|||.|.||.|.||||...||.||..|.|||.|||...|..|.||.|||.
BL02170___met    546 TGTAAACGGCTTTCAGATGAACAATCCCGATATTATACTGATCGCCACTA    595

BSNT_04854___    596 TGTTTATTTTAATCATCGTGTTTATTATTCAAATCATCGGTGATCTAATA    645
                     |.||.||.|||...||.|||||.||.||.|||.|.|||||.|||.|.|||
BL02170___met    596 TTTTCATCTTAGCTATTGTGTTCATCATCCAATTTATCGGGGATTTTATA    645

BSNT_04854___    646 ACAAATATTATAGACAAACGATAA    669
                     |||||||...||||||||||.||.
BL02170___met    646 ACAAATAAATTAGACAAACGTTAG    669


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