Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04853 and BL02169

See Amino acid alignment / Visit BSNT_04853 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:03
# Commandline: needle
#    -asequence dna-align/BSNT_04853___yusA.1.5803.seq
#    -bsequence dna-align/BL02169___metQ.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04853___yusA-BL02169___metQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04853___yusA-BL02169___metQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04853___yusA
# 2: BL02169___metQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 855
# Identity:     617/855 (72.2%)
# Similarity:   617/855 (72.2%)
# Gaps:          54/855 ( 6.3%)
# Score: 2189.0
# 
#
#=======================================

BSNT_04853___      1 TTGAAAAAGCTATTTTTGGGTGCATT-ACTGCTTGTA---------TTTG     40
                     .|||||||         .|||..||| ||.|||| ||         ||||
BL02169___met      1 ATGAAAAA---------AGGTTTATTAACAGCTT-TATTCATCATTTTTG     40

BSNT_04853___     41 CAGGAGTCATGGCTGCCTGCGGTT----------CGAATAACGGCGCTGA     80
                     ||||.||..||||.||.|||||.|          ||||    ||.|.|.|
BL02169___met     41 CAGGCGTTTTGGCCGCTTGCGGATCTTCCAGCAGCGAA----GGAGATAA     86

BSNT_04853___     81 ATCCGGCAAGAAAGAAATT---GTCGTTGCGGCAACAAAAACACCGCATG    127
                     |   |.||..||||..|||   ||||..|||   ||....||.||.||.|
BL02169___met     87 A---GACAGCAAAGTCATTACAGTCGGAGCG---ACGCCGACGCCTCACG    130

BSNT_04853___    128 CGGAAATTTTAAAAGAAGCTGAACCATTGCTGAAAGAAAAAGGCTATACG    177
                     |.|||||..|..|||||||..||||..|..|||||||||||||||||..|
BL02169___met    131 CCGAAATCCTTGAAGAAGCAAAACCGCTTTTGAAAGAAAAAGGCTATGAG    180

BSNT_04853___    178 CTGAAAGTGAAAGTGCTTAGTGATTACAAAATGTACAATAAAGCTTTAGC    227
                     ||.|||.|.|||....|.|..||.||||||.||..|||.|||||..|.||
BL02169___met    181 CTTAAAATCAAAAATTTCACGGACTACAAACTGATCAACAAAGCGCTCGC    230

BSNT_04853___    228 TGATAAAGAAGTGGACGCGAACTACTTCCAGCACATTCCTTACCTTGAGC    277
                     |...|||||..|.||.||||||||||||||||||.|.|||||||||||.|
BL02169___met    231 TACAAAAGATCTTGATGCGAACTACTTCCAGCACGTCCCTTACCTTGAAC    280

BSNT_04853___    278 AAGAAATGAAAGAAAACACAGATTACAAACTTGTGAATGCCGGCGCTGTT    327
                     |.||||||||||||||||.|||||||.|.||.||.||.|.|||.||.||.
BL02169___met    281 AGGAAATGAAAGAAAACAAAGATTACGATCTAGTCAACGTCGGTGCGGTA    330

BSNT_04853___    328 CACTTAGAGCCATTCGGTATTTACTCTAAAACATACAAATCACTGAAAGA    377
                     |||.|.|||||||||||.|||||||||||||..||.|||||..|.|||||
BL02169___met    331 CACCTTGAGCCATTCGGCATTTACTCTAAAAAGTATAAATCTTTAAAAGA    380

BSNT_04853___    378 CCTTCCAGACGGTGCGACAATCATTCTGACAAACAACGTTGCTGAACAAG    427
                     ||||||.||||||||.|.|||.|||.|||..|||||.|..||||||||.|
BL02169___met    381 CCTTCCTGACGGTGCAAAAATTATTATGAGCAACAATGCCGCTGAACAGG    430

BSNT_04853___    428 GCCGTATGCTTGCAATGCTTGAAAACGCTGGATTAATTACTCTTGACTCT    477
                     ||||.||||||||||||||||||||.||.|||.|.||.|..||..|.|| 
BL02169___met    431 GCCGCATGCTTGCAATGCTTGAAAATGCGGGACTGATCAAGCTGAAATC-    479

BSNT_04853___    478 AAAG---TTGAAACAGTTGACGCAACATTGAAAGACATTA-AGAAAAACC    523
                       ||   ||||||.|||.||.||.|||.|.|||||.|||| || |||||.
BL02169___met    480 --AGGCATTGAAAAAGTAGATGCGACAGTAAAAGATATTACAG-AAAACA    526

BSNT_04853___    524 CGAAAAACCTTGAATTCAAAA---AAGTAGCGCCTGAATTAACGGCAAAA    570
                     .|||||||||..||.||||||   |.||.|||||||||.|.|||||||||
BL02169___met    527 AGAAAAACCTGAAAATCAAAAATGATGTGGCGCCTGAAATGACGGCAAAA    576

BSNT_04853___    571 GCATATGAAAACAAAGAAGGAGACGCGGTCTTCATCAATGTAAACTATGC    620
                     |||||.|||...||.||||.||||||.||.|||||||||||.||||||||
BL02169___met    577 GCATACGAAGCTAATGAAGCAGACGCAGTGTTCATCAATGTGAACTATGC    626

BSNT_04853___    621 GATCCAAAATAAATTAAATCCTAAAAAAGATGCAATTGAAGTAGAATCAA    670
                     |||||||||.||..|.|||||.||||..|||.||||.|||.|.||.||..
BL02169___met    627 GATCCAAAACAAGCTGAATCCGAAAACTGATTCAATCGAACTTGAGTCTC    676

BSNT_04853___    671 CGAAAAACAACCCATACGCTAACATCATCGCAGTAAGAAAAGGCGAAGAA    720
                     |.|||.||||.||.|||||||||||||||||.||..|.||||||||.|||
BL02169___met    677 CAAAAGACAATCCTTACGCTAACATCATCGCCGTCCGCAAAGGCGACGAA    726

BSNT_04853___    721 GATTCTGCAAAAATCAAAGCGCTGATGGAAGTTCTTCACTCTAAAAAGAT    770
                     |||||||..|||.|.|||||.|||||||||||..|.|.||||.|..|.||
BL02169___met    727 GATTCTGACAAAGTAAAAGCTCTGATGGAAGTATTGCGCTCTGACGACAT    776

BSNT_04853___    771 CAAAGACTTCATCGAGAAAAAATACGACGGAGCTGTGCTTCCTGTATCTG    820
                     ||||.|.||||||||.||||||||..|.||..||||..||.|||||||||
BL02169___met    777 CAAAAAGTTCATCGACAAAAAATATAAAGGCTCTGTCATTTCTGTATCTG    826

BSNT_04853___    821 AATAA    825
                     |.|||
BL02169___met    827 AGTAA    831


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04853 and BL02169

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
