Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04841 and BL02162
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence dna-align/BSNT_04841___yurU.1.5803.seq
# -bsequence dna-align/BL02162___sufB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04841___yurU-BL02162___sufB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04841___yurU-BL02162___sufB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04841___yurU
# 2: BL02162___sufB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1399
# Identity: 1218/1399 (87.1%)
# Similarity: 1218/1399 (87.1%)
# Gaps: 2/1399 ( 0.1%)
# Score: 5354.0
#
#
#=======================================
BSNT_04841___ 1 ATGGCTAAAAAAATGCCTGATATTGGTGAATACAAGTATGGTTTTCACGA 50
||||||||.||||||||.|||||.||.|||||.||.||.||||||..|||
BL02162___suf 1 ATGGCTAAGAAAATGCCGGATATCGGCGAATATAAATACGGTTTTGCCGA 50
BSNT_04841___ 51 CAAGGACGTTTCCATTTTCCGTTCAGAGCGCGGATTGACAAAAGAAATCG 100
|||.||||||||||||||||||||||||||.|||||||||||||||||||
BL02162___suf 51 CAAAGACGTTTCCATTTTCCGTTCAGAGCGGGGATTGACAAAAGAAATCG 100
BSNT_04841___ 101 TAGAAGAAATTTCTCGCATGAAAGAAGAGCCTCAATGGATGCTTGACTTC 150
|.|||||||||||.|||||||||||||||||.||.||||||||.|||||.
BL02162___suf 101 TTGAAGAAATTTCACGCATGAAAGAAGAGCCACAGTGGATGCTCGACTTT 150
BSNT_04841___ 151 CGCTTGAAATCACTTGAGCATTTCTACAATATGCCGATGCCTCAATGGGG 200
|||||||||||.|||||.||.||||||||||||||.|||||.||||||||
BL02162___suf 151 CGCTTGAAATCTCTTGAACACTTCTACAATATGCCAATGCCGCAATGGGG 200
BSNT_04841___ 201 CGGAGATTTAAACTCACTGAACTTTGACGAAATTACGTACTACGTAAAAC 250
||||||||||||||||.|.||||||||.|||||.||.|||||.|||||.|
BL02162___suf 201 CGGAGATTTAAACTCATTAAACTTTGATGAAATCACATACTATGTAAAGC 250
BSNT_04841___ 251 CGTCTGAGCGTTCAGAGCGTTCTTGGGATGAAGTTCCTGAAGAAATTAAG 300
|.||||||||||||||..|.||.|||||.|||||.|||||.|||||.||.
BL02162___suf 251 CTTCTGAGCGTTCAGAAAGATCATGGGACGAAGTGCCTGAGGAAATCAAA 300
BSNT_04841___ 301 CAAACATTCGACAAGCTCGGTATTCCTGAAGCTGAACAAAAATACCTTGC 350
||.|||||.|||||||||||.||.||.||||||||.||||||||..|.||
BL02162___suf 301 CAGACATTTGACAAGCTCGGAATCCCAGAAGCTGAGCAAAAATATTTGGC 350
BSNT_04841___ 351 GGGTGTTTCTGCTCAGTACGAATCTGAGGTTGTATACCACAACATGAAAG 400
.|||||.||.||.||.||.||.||.||.||.||.|||||.||||||||||
BL02162___suf 351 CGGTGTATCCGCGCAATATGAGTCAGAAGTCGTTTACCATAACATGAAAG 400
BSNT_04841___ 401 AAGATCTTGAAGCGCAAGGCATCGTCTTTAAAGACACTGACAGCGCGCTG 450
||||.|||||..|.|||||.||||||||.||||||||.||||||||.||.
BL02162___suf 401 AAGACCTTGAGTCTCAAGGGATCGTCTTCAAAGACACAGACAGCGCCCTC 450
BSNT_04841___ 451 AAAGAGAATGAAGATATTTTCCGTGAGCACTGGGCAAAAGTAATCCCGCC 500
|||||.||||||||.||||||||.|||||.|||||||||||.||||||||
BL02162___suf 451 AAAGAAAATGAAGACATTTTCCGCGAGCATTGGGCAAAAGTCATCCCGCC 500
BSNT_04841___ 501 GACTGATAACAAGTTTGCGGCGCTT-AACTCAGCTGTTTGGTCCGGCGGA 549
||||||.|||||||||||||| ||| ||||||||.||.|||||.||||||
BL02162___suf 501 GACTGACAACAAGTTTGCGGC-CTTGAACTCAGCGGTATGGTCAGGCGGA 549
BSNT_04841___ 550 TCTTTCATCTACGTGCCTAAAGGCGTGAAGGTTGAAACACCGCTTCAAGC 599
||.||||||||||||||.||||||||.||.||.||.||.|||||.|||||
BL02162___suf 550 TCATTCATCTACGTGCCAAAAGGCGTAAAAGTGGATACTCCGCTGCAAGC 599
BSNT_04841___ 600 TTACTTCCGTATCAACTCTGAGAACATGGGTCAGTTCGAACGTACACTGA 649
.||||||||.||||||||.||.||||||||.|||||||||||.||.||||
BL02162___suf 600 ATACTTCCGCATCAACTCAGAAAACATGGGACAGTTCGAACGGACGCTGA 649
BSNT_04841___ 650 TCATTGTTGACGAAGAAGCAAGCGTTCATTATGTTGAAGGCTGTACTGCG 699
||||.||.|||||||..||...|||.||.|||||.||.||.|||||.||.
BL02162___suf 650 TCATCGTAGACGAAGGCGCTCACGTCCACTATGTAGAGGGATGTACAGCA 699
BSNT_04841___ 700 CCTGTTTACACAACAAACTCACTTCACAGTGCGGTCGTTGAGATCATCGT 749
||||||||.||.||.|||||.||||||||.|||||.||||||||||||||
BL02162___suf 700 CCTGTTTATACGACGAACTCCCTTCACAGCGCGGTTGTTGAGATCATCGT 749
BSNT_04841___ 750 GAAAAAAGGCGGCTACTGCCGTTATACAACGATCCAAAACTGGGCGAACA 799
.||||||||||||||||||||||||||||||||.||||||||||||||||
BL02162___suf 750 TAAAAAAGGCGGCTACTGCCGTTATACAACGATTCAAAACTGGGCGAACA 799
BSNT_04841___ 800 ACGTTTACAACCTTGTAACAAAGCGTACAGTCTGTGAAGAAAACGCAACA 849
||||.|.|||||||||.|||||||||.|.||.||||||||||||||.||.
BL02162___suf 800 ACGTCTTCAACCTTGTGACAAAGCGTGCGGTTTGTGAAGAAAACGCGACG 849
BSNT_04841___ 850 ATGGAATGGATCGACGGCAACATCGGTTCTAAGCTGACAATGAAATATCC 899
|||||||||||||||||.||||||||.||.||||||||||||||||||||
BL02162___suf 850 ATGGAATGGATCGACGGAAACATCGGCTCCAAGCTGACAATGAAATATCC 899
BSNT_04841___ 900 GGCTTGTATCCTAAAAGGCGAAGGCGCGCGCGGTATGACGCTTTCTATCG 949
.||...||||||.||||||||||||||||||||.||||||||||||||||
BL02162___suf 900 TGCCGTTATCCTGAAAGGCGAAGGCGCGCGCGGCATGACGCTTTCTATCG 949
BSNT_04841___ 950 CTCTTGCGGGTAAAGGCCAGCATCAGGATGCAGGTGCGAAAATGATTCAC 999
|.||.||.||.|||||.||||||||||||||.||||||||||||||||||
BL02162___suf 950 CCCTGGCAGGAAAAGGACAGCATCAGGATGCCGGTGCGAAAATGATTCAC 999
BSNT_04841___ 1000 CTTGCACCAAACACATCATCTACAATCGTATCAAAATCGATTTCAAAACA 1049
||||||||.||.||.|||||.||||||||.||||||||.||.||||||||
BL02162___suf 1000 CTTGCACCGAATACGTCATCCACAATCGTTTCAAAATCAATCTCAAAACA 1049
BSNT_04841___ 1050 GGGCGGAAAAGTAACGTACCGCGGAATCGTCCACTTCGGACGCAAAGCGG 1099
.|||||||||||.||.||||||||||||||.|||||||||||||||||.|
BL02162___suf 1050 AGGCGGAAAAGTCACATACCGCGGAATCGTACACTTCGGACGCAAAGCCG 1099
BSNT_04841___ 1100 AAGGCGCCCGCTCTAACATCGAGTGCGATACGCTCATTATGGATAACAAA 1149
|||||||||||||.||||||||||||||.|||||.||.|||||.||||||
BL02162___suf 1100 AAGGCGCCCGCTCAAACATCGAGTGCGACACGCTTATCATGGACAACAAA 1149
BSNT_04841___ 1150 TCAACTTCAGACACAATTCCTTACAATGAAATCTTAAATGATAACATTTC 1199
||||||||.||.|||||.||.|||||||||||.||.||.||.||||||||
BL02162___suf 1150 TCAACTTCTGATACAATCCCATACAATGAAATTTTGAACGACAACATTTC 1199
BSNT_04841___ 1200 ATTGGAGCACGAAGCGAAAGTGTCTAAAGTATCTGAAGAGCAGCTCTTCT 1249
|||||||||||||||||||||.||.|||||||||||||||||||||||||
BL02162___suf 1200 ATTGGAGCACGAAGCGAAAGTATCAAAAGTATCTGAAGAGCAGCTCTTCT 1249
BSNT_04841___ 1250 ACTTGATGAGCCGCGGTATTTCTGAAGAAGAAGCAACTGAAATGATCGTA 1299
|||||||||||||||||||||||||||||||||||||.|||||||||||.
BL02162___suf 1250 ACTTGATGAGCCGCGGTATTTCTGAAGAAGAAGCAACAGAAATGATCGTC 1299
BSNT_04841___ 1300 ATGGGCTTCATCGAGCCATTCACAAAAGAGCTTCCAATGGAATACGCAGT 1349
|||||||||||||||||.|||||.|||||.||.||.||||||||||||||
BL02162___suf 1300 ATGGGCTTCATCGAGCCGTTCACGAAAGAACTGCCGATGGAATACGCAGT 1349
BSNT_04841___ 1350 TGAAATGAACCGTTTGATTAAGTTCGAAATGGAAGGTTCTATAGGTTAA 1398
.||||||||||||.|.||.||||||||.||||||||.|||||.||||||
BL02162___suf 1350 CGAAATGAACCGTCTTATCAAGTTCGAGATGGAAGGGTCTATTGGTTAA 1398
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