Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04783 and BL02143
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:00
# Commandline: needle
# -asequence dna-align/BSNT_04783___lipA.1.5803.seq
# -bsequence dna-align/BL02143___lipA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04783___lipA-BL02143___lipA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04783___lipA-BL02143___lipA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04783___lipA
# 2: BL02143___lipA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 899
# Identity: 736/899 (81.9%)
# Similarity: 736/899 (81.9%)
# Gaps: 4/899 ( 0.4%)
# Score: 3004.0
#
#
#=======================================
BSNT_04783___ 1 TTGGCAAAGAAAGACGAACACCTCAGAAAGCCCGAATGGCTTAAAATTAA 50
|||||||||||||||||.|||||.|||||||||||||||||||||||.||
BL02143___lip 1 TTGGCAAAGAAAGACGAGCACCTAAGAAAGCCCGAATGGCTTAAAATCAA 50
BSNT_04783___ 51 ATTAAATACAAATGAAAACTATACAGGGC-TCAAAAAACTCATGCGGGAA 99
..|.||.||.|||||||||||||| |||| |.||||||.|.|||||||||
BL02143___lip 51 GCTGAACACGAATGAAAACTATAC-GGGCTTAAAAAAATTAATGCGGGAA 99
BSNT_04783___ 100 AACAACCTGCACACCGTATGCGAAGAAGCAAAGTGCCCGAATATTCATGA 149
||||||||.||.||.||.||||||||.|||||.||||||||.||.||.||
BL02143___lip 100 AACAACCTCCATACGGTCTGCGAAGAGGCAAAATGCCCGAACATCCACGA 149
BSNT_04783___ 150 ATGCTGGGCGGTCAGACGTACAGCGACATTTATGATTTTAGGTTCTGTTT 199
|||||||||.|||||||||||.|||||.|||||||||.|.||.|||||.|
BL02143___lip 150 ATGCTGGGCCGTCAGACGTACCGCGACCTTTATGATTCTCGGATCTGTCT 199
BSNT_04783___ 200 GTACAAGAGCATGCCGTTTCTGTGCTGTCAAAACAGGCCTTCCAACTGAG 249
||||.|||||.|||||.||||||||.||.||.||.||.||.||.||.|||
BL02143___lip 200 GTACGAGAGCCTGCCGCTTCTGTGCGGTGAAGACGGGGCTGCCGACAGAG 249
BSNT_04783___ 250 CTTGACCTGCAAGAGCCGGAACGCGTAGCGGATTCAGTCGCGC-TTATGA 298
||||||.||.|.|||||||||.|.||.||.|||||.|| |.|| |.||||
BL02143___lip 250 CTTGACTTGAATGAGCCGGAAAGAGTCGCAGATTCTGT-GAGCATCATGA 298
BSNT_04783___ 299 ATCTGAAACACGCGGTCATTACGGCTGTTGCGCGTGACGATCAGAAAGAT 348
|.||||||||||||||||||||.||.|||||.|||||||||...|||||.
BL02143___lip 299 ACCTGAAACACGCGGTCATTACAGCCGTTGCCCGTGACGATTTAAAAGAC 348
BSNT_04783___ 349 GGAGGGGCAGGCATTTTCGCGGAAACTGTCCGTGCGATCCGCAGAAAAAG 398
|||||.||.||..|.|||||.|||||.||.||.||..||||.||||||||
BL02143___lip 349 GGAGGAGCGGGGGTATTCGCCGAAACCGTACGCGCCGTCCGGAGAAAAAG 398
BSNT_04783___ 399 CCCGTTCACAACAATTGAGGTGCTGCCGTCTGATATGGGCGGAAACTACG 448
|||.||.||||||||.||.||.||||||||.||||||||||||.||||..
BL02143___lip 399 CCCATTTACAACAATCGAAGTTCTGCCGTCCGATATGGGCGGAGACTATA 448
BSNT_04783___ 449 ATAACCTAAAAACCTTAATGGATACACGCCCAGACATCCTGAATCACAAT 498
||||..|.|||||..|.||||||||.||.||.|||||..|.||.||.|||
BL02143___lip 449 ATAATTTGAAAACGCTGATGGATACGCGTCCGGACATTTTAAACCATAAT 498
BSNT_04783___ 499 ATCGAAACGGTTCGCCGCCTGACGCCAAGAGTCCGCGCGCGTGCGACGTA 548
||.||||||||.||||||||||||||.||||||||.|||.|.||.||.||
BL02143___lip 499 ATTGAAACGGTCCGCCGCCTGACGCCGAGAGTCCGTGCGAGAGCTACATA 548
BSNT_04783___ 549 CGACCGTTCATTGGAATTTTTGCGCCGTGCGAAGGAAATGCAGCCTGACA 598
.||..|.||||||||||||||||||||.||.||.||.||||||||.||||
BL02143___lip 549 TGAAAGATCATTGGAATTTTTGCGCCGCGCCAAAGAGATGCAGCCGGACA 598
BSNT_04783___ 599 TTCCTACAAAATCAAGTATCATGATCGGACTCGGCGAAACAAAAGAAGAG 648
|.||.||.|||||.||.|||||||||||.||.|||||||||||||||||.
BL02143___lip 599 TCCCGACGAAATCCAGCATCATGATCGGTCTTGGCGAAACAAAAGAAGAA 648
BSNT_04783___ 649 ATTATTGAAGTAATGGACGACCTTTTGGCGAACAACGTGGATATTATGGC 698
||.||.|||..|||||||||||||.|.|||||||||||.||.||.|||||
BL02143___lip 649 ATCATCGAAACAATGGACGACCTTCTTGCGAACAACGTCGACATCATGGC 698
BSNT_04783___ 699 AATCGGCCAATATCTGCAGCCGACGAAGAAACACTTGAAAGTCCAAAAAT 748
|||||||||.||||||||||||.|.||.||||||.|.|||||.||.||||
BL02143___lip 699 AATCGGCCAGTATCTGCAGCCGTCCAAAAAACACATTAAAGTACAGAAAT 748
BSNT_04783___ 749 ACTACCATCCTGATGAATTTGCAGAATTAAAAGAAATCGCGATGCAAAAA 798
|.|||||||||||.||.|||||.|||.|.|||||||||||.|||.||||.
BL02143___lip 749 ATTACCATCCTGACGAGTTTGCCGAACTGAAAGAAATCGCCATGGAAAAG 798
BSNT_04783___ 799 GGCTTCAGCCATTGTGAAGCCGGTCCGCTTGTCCGTTCCTCTTACCATGC 848
|||||||||||.||||||||.||.|||||.||||||||.||.||||||||
BL02143___lip 799 GGCTTCAGCCACTGTGAAGCAGGACCGCTCGTCCGTTCTTCATACCATGC 848
BSNT_04783___ 849 GGATGAACAAGTAAACGAAGCATCTAAAAAGCGTCAAGCACAAGCATAA 897
.||.|||||.||.||.|||||.||||||||.||.||.||.||.||||||
BL02143___lip 849 CGACGAACAGGTGAATGAAGCGTCTAAAAAACGCCAGGCGCAGGCATAA 897
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