Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04783 and BL02143

See Amino acid alignment / Visit BSNT_04783 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence dna-align/BSNT_04783___lipA.1.5803.seq
#    -bsequence dna-align/BL02143___lipA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04783___lipA-BL02143___lipA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04783___lipA-BL02143___lipA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04783___lipA
# 2: BL02143___lipA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 899
# Identity:     736/899 (81.9%)
# Similarity:   736/899 (81.9%)
# Gaps:           4/899 ( 0.4%)
# Score: 3004.0
# 
#
#=======================================

BSNT_04783___      1 TTGGCAAAGAAAGACGAACACCTCAGAAAGCCCGAATGGCTTAAAATTAA     50
                     |||||||||||||||||.|||||.|||||||||||||||||||||||.||
BL02143___lip      1 TTGGCAAAGAAAGACGAGCACCTAAGAAAGCCCGAATGGCTTAAAATCAA     50

BSNT_04783___     51 ATTAAATACAAATGAAAACTATACAGGGC-TCAAAAAACTCATGCGGGAA     99
                     ..|.||.||.|||||||||||||| |||| |.||||||.|.|||||||||
BL02143___lip     51 GCTGAACACGAATGAAAACTATAC-GGGCTTAAAAAAATTAATGCGGGAA     99

BSNT_04783___    100 AACAACCTGCACACCGTATGCGAAGAAGCAAAGTGCCCGAATATTCATGA    149
                     ||||||||.||.||.||.||||||||.|||||.||||||||.||.||.||
BL02143___lip    100 AACAACCTCCATACGGTCTGCGAAGAGGCAAAATGCCCGAACATCCACGA    149

BSNT_04783___    150 ATGCTGGGCGGTCAGACGTACAGCGACATTTATGATTTTAGGTTCTGTTT    199
                     |||||||||.|||||||||||.|||||.|||||||||.|.||.|||||.|
BL02143___lip    150 ATGCTGGGCCGTCAGACGTACCGCGACCTTTATGATTCTCGGATCTGTCT    199

BSNT_04783___    200 GTACAAGAGCATGCCGTTTCTGTGCTGTCAAAACAGGCCTTCCAACTGAG    249
                     ||||.|||||.|||||.||||||||.||.||.||.||.||.||.||.|||
BL02143___lip    200 GTACGAGAGCCTGCCGCTTCTGTGCGGTGAAGACGGGGCTGCCGACAGAG    249

BSNT_04783___    250 CTTGACCTGCAAGAGCCGGAACGCGTAGCGGATTCAGTCGCGC-TTATGA    298
                     ||||||.||.|.|||||||||.|.||.||.|||||.|| |.|| |.||||
BL02143___lip    250 CTTGACTTGAATGAGCCGGAAAGAGTCGCAGATTCTGT-GAGCATCATGA    298

BSNT_04783___    299 ATCTGAAACACGCGGTCATTACGGCTGTTGCGCGTGACGATCAGAAAGAT    348
                     |.||||||||||||||||||||.||.|||||.|||||||||...|||||.
BL02143___lip    299 ACCTGAAACACGCGGTCATTACAGCCGTTGCCCGTGACGATTTAAAAGAC    348

BSNT_04783___    349 GGAGGGGCAGGCATTTTCGCGGAAACTGTCCGTGCGATCCGCAGAAAAAG    398
                     |||||.||.||..|.|||||.|||||.||.||.||..||||.||||||||
BL02143___lip    349 GGAGGAGCGGGGGTATTCGCCGAAACCGTACGCGCCGTCCGGAGAAAAAG    398

BSNT_04783___    399 CCCGTTCACAACAATTGAGGTGCTGCCGTCTGATATGGGCGGAAACTACG    448
                     |||.||.||||||||.||.||.||||||||.||||||||||||.||||..
BL02143___lip    399 CCCATTTACAACAATCGAAGTTCTGCCGTCCGATATGGGCGGAGACTATA    448

BSNT_04783___    449 ATAACCTAAAAACCTTAATGGATACACGCCCAGACATCCTGAATCACAAT    498
                     ||||..|.|||||..|.||||||||.||.||.|||||..|.||.||.|||
BL02143___lip    449 ATAATTTGAAAACGCTGATGGATACGCGTCCGGACATTTTAAACCATAAT    498

BSNT_04783___    499 ATCGAAACGGTTCGCCGCCTGACGCCAAGAGTCCGCGCGCGTGCGACGTA    548
                     ||.||||||||.||||||||||||||.||||||||.|||.|.||.||.||
BL02143___lip    499 ATTGAAACGGTCCGCCGCCTGACGCCGAGAGTCCGTGCGAGAGCTACATA    548

BSNT_04783___    549 CGACCGTTCATTGGAATTTTTGCGCCGTGCGAAGGAAATGCAGCCTGACA    598
                     .||..|.||||||||||||||||||||.||.||.||.||||||||.||||
BL02143___lip    549 TGAAAGATCATTGGAATTTTTGCGCCGCGCCAAAGAGATGCAGCCGGACA    598

BSNT_04783___    599 TTCCTACAAAATCAAGTATCATGATCGGACTCGGCGAAACAAAAGAAGAG    648
                     |.||.||.|||||.||.|||||||||||.||.|||||||||||||||||.
BL02143___lip    599 TCCCGACGAAATCCAGCATCATGATCGGTCTTGGCGAAACAAAAGAAGAA    648

BSNT_04783___    649 ATTATTGAAGTAATGGACGACCTTTTGGCGAACAACGTGGATATTATGGC    698
                     ||.||.|||..|||||||||||||.|.|||||||||||.||.||.|||||
BL02143___lip    649 ATCATCGAAACAATGGACGACCTTCTTGCGAACAACGTCGACATCATGGC    698

BSNT_04783___    699 AATCGGCCAATATCTGCAGCCGACGAAGAAACACTTGAAAGTCCAAAAAT    748
                     |||||||||.||||||||||||.|.||.||||||.|.|||||.||.||||
BL02143___lip    699 AATCGGCCAGTATCTGCAGCCGTCCAAAAAACACATTAAAGTACAGAAAT    748

BSNT_04783___    749 ACTACCATCCTGATGAATTTGCAGAATTAAAAGAAATCGCGATGCAAAAA    798
                     |.|||||||||||.||.|||||.|||.|.|||||||||||.|||.||||.
BL02143___lip    749 ATTACCATCCTGACGAGTTTGCCGAACTGAAAGAAATCGCCATGGAAAAG    798

BSNT_04783___    799 GGCTTCAGCCATTGTGAAGCCGGTCCGCTTGTCCGTTCCTCTTACCATGC    848
                     |||||||||||.||||||||.||.|||||.||||||||.||.||||||||
BL02143___lip    799 GGCTTCAGCCACTGTGAAGCAGGACCGCTCGTCCGTTCTTCATACCATGC    848

BSNT_04783___    849 GGATGAACAAGTAAACGAAGCATCTAAAAAGCGTCAAGCACAAGCATAA    897
                     .||.|||||.||.||.|||||.||||||||.||.||.||.||.||||||
BL02143___lip    849 CGACGAACAGGTGAATGAAGCGTCTAAAAAACGCCAGGCGCAGGCATAA    897


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