Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04781 and BL02142

See Amino acid alignment / Visit BSNT_04781 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence dna-align/BSNT_04781.1.5803.seq
#    -bsequence dna-align/BL02142___yutD.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04781-BL02142___yutD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04781-BL02142___yutD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04781
# 2: BL02142___yutD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     222/277 (80.1%)
# Similarity:   222/277 (80.1%)
# Gaps:           2/277 ( 0.7%)
# Score: 878.0
# 
#
#=======================================

BSNT_04781         1 ATGATTCTTATTCAAAATGCTGAATTTGAATTGGTGCACA-ATTTCAAAG     49
                     ||||||.|..||||.||.||||.|||||||.|.|| ||.| ||.|.|||.
BL02142___yut      1 ATGATTGTCGTTCAGAACGCTGCATTTGAAGTCGT-CAAAGATGTGAAAA     49

BSNT_04781        50 ACGGCTTCAACGAAGAGGCTTTTAAAGCCCGCTACTCCGATATATTAAAT     99
                     ||||.||.||||||||.||.|||||||||.|.||||||||.||.||||||
BL02142___yut     50 ACGGTTTTAACGAAGAAGCGTTTAAAGCCAGATACTCCGACATTTTAAAT     99

BSNT_04781       100 AAATACGATTATATTGTGGGAGACTGGGGATACGGTCAGTTAAGGCTCAA    149
                     ||||||||.||.||.||.||.||.|||||||||.|.|||.|.|||||.||
BL02142___yut    100 AAATACGACTACATCGTCGGGGATTGGGGATACAGCCAGCTGAGGCTGAA    149

BSNT_04781       150 GGGCTTCTTTGACGACCAGAATCAAAAGGCAACCTTCGAAACGAAAATCA    199
                     .|||||.||||||||.||.|||||||||||.||.||.||.|||||.||||
BL02142___yut    150 AGGCTTTTTTGACGATCAAAATCAAAAGGCCACATTTGATACGAAGATCA    199

BSNT_04781       200 GCACATTAGATGAATATATTTACGAATACTGCAATTTCGGCTGTGCGTAT    249
                     ||||..|.|||||||||||||||||.||||||||||||||.|||||.||.
BL02142___yut    200 GCACGCTTGATGAATATATTTACGAGTACTGCAATTTCGGATGTGCCTAC    249

BSNT_04781       250 TTTGTCTTGAAACGGATCAGAAAATAA    276
                     |||||.||.|||||..|..||||||||
BL02142___yut    250 TTTGTTTTAAAACGTCTGCGAAAATAA    276


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